RNA–Protein interactions for RNA: ENST00000276585.8

MRPS28-201, Transcript of mitochondrial ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPS28, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-201ENST00000276585 PRSS36Q5K4E3 855 aa13.33□□□□□ -0.28
MRPS28-201ENST00000276585 PDXDC1Q6P996 788 aa13.33□□□□□ -0.28
MRPS28-201ENST00000276585 FOXD4L3Q6VB84 417 aaPredicted RBP13.33□□□□□ -0.28
MRPS28-201ENST00000276585 CCDC73Q6ZRK6 1079 aa13.33□□□□□ -0.28
MRPS28-201ENST00000276585 PDZD4Q76G19 769 aaPredicted RBP13.33□□□□□ -0.28
MRPS28-201ENST00000276585 SV2BQ7L1I2 683 aa13.33□□□□□ -0.28
MRPS28-201ENST00000276585 RTL10Q7L3V2 364 aa13.33□□□□□ -0.28
MRPS28-201ENST00000276585 ZNF720Q7Z2F6 126 aa13.33□□□□□ -0.28
MRPS28-201ENST00000276585 ZNF605Q86T29 641 aa13.33□□□□□ -0.28
MRPS28-201ENST00000276585 MFSD6LQ8IWD5 586 aa13.33□□□□□ -0.28
MRPS28-201ENST00000276585 PDILTQ8N807 584 aa13.33□□□□□ -0.28
MRPS28-201ENST00000276585 SPRYD3Q8NCJ5 442 aa13.33□□□□□ -0.28
MRPS28-201ENST00000276585 ZNF396Q96N95 335 aaPredicted RBP13.33□□□□□ -0.28
MRPS28-201ENST00000276585 CPSF3Q9UKF6 684 aaKnown RBP13.33□□□□□ -0.28
MRPS28-201ENST00000276585 RAXQ9Y2V3 346 aa13.33□□□□□ -0.28
MRPS28-201ENST00000276585 ZDHHC9Q9Y397 364 aa13.33□□□□□ -0.28
MRPS28-201ENST00000276585 STYXL1Q9Y6J8 313 aa13.33□□□□□ -0.28
MRPS28-201ENST00000276585 HECTD1Q9ULT8 2610 aa13.33□□□□□ -0.28
MRPS28-201ENST00000276585 MYO18BQ8IUG5 2567 aa13.32□□□□□ -0.28
MRPS28-201ENST00000276585 MYBPHLA2RUH7 354 aa13.32□□□□□ -0.28
MRPS28-201ENST00000276585 FAM221BA6H8Z2 402 aa13.32□□□□□ -0.28
MRPS28-201ENST00000276585 HEPACAM2A8MVW5 462 aa13.32□□□□□ -0.28
MRPS28-201ENST00000276585 LACTBL1A8MY62 500 aa13.32□□□□□ -0.28
MRPS28-201ENST00000276585 PATE3B3GLJ2 98 aa13.32□□□□□ -0.28
MRPS28-201ENST00000276585 ARNTLO00327 626 aa13.32□□□□□ -0.28
MRPS28-201ENST00000276585 PPEF2O14830 753 aa13.32□□□□□ -0.28
MRPS28-201ENST00000276585 LRPAP1P30533 357 aa13.32□□□□□ -0.28
MRPS28-201ENST00000276585 CTHP32929 405 aa13.32□□□□□ -0.28
MRPS28-201ENST00000276585 GUCY2FP51841 1108 aa13.32□□□□□ -0.28
MRPS28-201ENST00000276585 CCINQ13939 588 aa13.32□□□□□ -0.28
MRPS28-201ENST00000276585 PKN3Q6P5Z2 889 aa13.32□□□□□ -0.28
MRPS28-201ENST00000276585 RALGPS2Q86X27 583 aaPredicted RBP13.32□□□□□ -0.28
MRPS28-201ENST00000276585 ZSWIM2Q8NEG5 633 aa13.32□□□□□ -0.28
MRPS28-201ENST00000276585 HVCN1Q96D96 273 aa13.32□□□□□ -0.28
MRPS28-201ENST00000276585 ZSWIM3Q96MP5 696 aa13.32□□□□□ -0.28
MRPS28-201ENST00000276585 MSTO1Q9BUK6 570 aa13.32□□□□□ -0.28
MRPS28-201ENST00000276585 PLEKHA5Q9HAU0 1116 aa13.32□□□□□ -0.28
MRPS28-201ENST00000276585 OLFML3Q9NRN5 406 aa13.32□□□□□ -0.28
MRPS28-201ENST00000276585 IGSF5Q9NSI5 407 aa13.32□□□□□ -0.28
MRPS28-201ENST00000276585 KBTBD4Q9NVX7 518 aa13.32□□□□□ -0.28
MRPS28-201ENST00000276585 TBC1D7Q9P0N9 293 aa13.32□□□□□ -0.28
MRPS28-201ENST00000276585 SEL1LQ9UBV2 794 aa13.32□□□□□ -0.28
MRPS28-201ENST00000276585 BACE2Q9Y5Z0 518 aa13.32□□□□□ -0.28
MRPS28-201ENST00000276585 ASCC3Q8N3C0 2202 aaKnown RBP13.32□□□□□ -0.28
MRPS28-201ENST00000276585 KALRNO60229 2985 aa13.32□□□□□ -0.28
MRPS28-201ENST00000276585 APC2O95996 2303 aa13.31□□□□□ -0.28
MRPS28-201ENST00000276585 CUTAO60888 179 aa13.31□□□□□ -0.28
MRPS28-201ENST00000276585 NFICP08651 508 aa13.31□□□□□ -0.28
MRPS28-201ENST00000276585 GAP43P17677 238 aa13.31□□□□□ -0.28
MRPS28-201ENST00000276585 RPL9P32969 192 aaKnown RBP13.31□□□□□ -0.28
MRPS28-201ENST00000276585 MATR3P43243 847 aaKnown RBP eCLIP13.31□□□□□ -0.286e-6■■■■□ 21.9
MRPS28-201ENST00000276585 MAPK8P45983 427 aa13.31□□□□□ -0.28
MRPS28-201ENST00000276585 AARSP49588 968 aaKnown RBP eCLIP13.31□□□□□ -0.28
MRPS28-201ENST00000276585 WNT7BP56706 349 aa13.31□□□□□ -0.28
MRPS28-201ENST00000276585 MRPL58Q14197 206 aaKnown RBP13.31□□□□□ -0.28
MRPS28-201ENST00000276585 CRELD2Q6UXH1 353 aaPredicted RBP13.31□□□□□ -0.28
MRPS28-201ENST00000276585 CYP2U1Q7Z449 544 aa13.31□□□□□ -0.28
MRPS28-201ENST00000276585 ZSCAN18Q8TBC5 510 aaPredicted RBP13.31□□□□□ -0.28
MRPS28-201ENST00000276585 MDM1Q8TC05 714 aa13.31□□□□□ -0.28
MRPS28-201ENST00000276585 SLC39A7Q92504 469 aa13.31□□□□□ -0.28
MRPS28-201ENST00000276585 SUSD3Q96L08 255 aa13.31□□□□□ -0.28
MRPS28-201ENST00000276585 HHIPQ96QV1 700 aa13.31□□□□□ -0.28
MRPS28-201ENST00000276585 UBL7Q96S82 380 aaPredicted RBP13.31□□□□□ -0.28
MRPS28-201ENST00000276585 SLITRK6Q9H5Y7 841 aa13.31□□□□□ -0.28
MRPS28-201ENST00000276585 SCUBE2Q9NQ36 999 aa13.31□□□□□ -0.28
MRPS28-201ENST00000276585 RAI2Q9Y5P3 530 aa13.31□□□□□ -0.28
MRPS28-201ENST00000276585 CDY1Q9Y6F8 540 aa13.31□□□□□ -0.28
MRPS28-201ENST00000276585 ZNF462Q96JM2 2506 aa13.3□□□□□ -0.28
MRPS28-201ENST00000276585 SYN3O14994 580 aa13.3□□□□□ -0.28
MRPS28-201ENST00000276585 CHADO15335 359 aa13.3□□□□□ -0.28
MRPS28-201ENST00000276585 ATG13O75143 517 aa13.3□□□□□ -0.28
MRPS28-201ENST00000276585 C1QL1O75973 258 aa13.3□□□□□ -0.28
MRPS28-201ENST00000276585 ELF1P32519 619 aa13.3□□□□□ -0.28
MRPS28-201ENST00000276585 CCR2P41597 374 aa13.3□□□□□ -0.28
MRPS28-201ENST00000276585 IRX4P78413 519 aa13.3□□□□□ -0.28
MRPS28-201ENST00000276585 ROR1Q01973 937 aa13.3□□□□□ -0.28
MRPS28-201ENST00000276585 DNM1Q05193 864 aaKnown RBP13.3□□□□□ -0.28
MRPS28-201ENST00000276585 PPP2R3AQ06190 1150 aa13.3□□□□□ -0.28
MRPS28-201ENST00000276585 L1TD1Q5T7N2 865 aaKnown RBP13.3□□□□□ -0.28
MRPS28-201ENST00000276585 CYP4A22Q5TCH4 519 aa13.3□□□□□ -0.28
MRPS28-201ENST00000276585 SLC8B1Q6J4K2 584 aa13.3□□□□□ -0.28
MRPS28-201ENST00000276585 CAMKK1Q8N5S9 505 aa13.3□□□□□ -0.28
MRPS28-201ENST00000276585 HPS3Q969F9 1004 aa13.3□□□□□ -0.28
MRPS28-201ENST00000276585 TRIM9Q9C026 710 aa13.3□□□□□ -0.28
MRPS28-201ENST00000276585 TNMDQ9H2S6 317 aa13.3□□□□□ -0.28
MRPS28-201ENST00000276585 UBQLN1Q9UMX0 589 aaKnown RBP13.3□□□□□ -0.28
MRPS28-201ENST00000276585 PCDHA7Q9UN72 937 aa13.3□□□□□ -0.28
MRPS28-201ENST00000276585 NCANO14594 1321 aa13.3□□□□□ -0.28
MRPS28-201ENST00000276585 PCNX2A6NKB5 2137 aa13.29□□□□□ -0.28
MRPS28-201ENST00000276585 M0QZQ0 153 aa13.29□□□□□ -0.28
MRPS28-201ENST00000276585 PRRG1O14668 218 aa13.29□□□□□ -0.28
MRPS28-201ENST00000276585 TRAPPC3O43617 180 aa13.29□□□□□ -0.28
MRPS28-201ENST00000276585 MICAL2O94851 1124 aa13.29□□□□□ -0.28
MRPS28-201ENST00000276585 HSP90AA1P07900 732 aaKnown RBP13.29□□□□□ -0.28
MRPS28-201ENST00000276585 IDEP14735 1019 aa13.29□□□□□ -0.28
MRPS28-201ENST00000276585 CYP3A5P20815 502 aa13.29□□□□□ -0.28
MRPS28-201ENST00000276585 ABCD1P33897 745 aa13.29□□□□□ -0.28
MRPS28-201ENST00000276585 HOXD13P35453 343 aa13.29□□□□□ -0.28
MRPS28-201ENST00000276585 ACOT2P49753 483 aa13.29□□□□□ -0.28
MRPS28-201ENST00000276585 LMAN2Q12907 356 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms