RNA–Protein interactions for RNA: ENST00000274901.8

HMGCLL1-201, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-201ENST00000274901 ZNF711Q9Y462 761 aa9.64□□□□□ -0.87
HMGCLL1-201ENST00000274901 CCDC160A6NGH7 325 aa9.64□□□□□ -0.87
HMGCLL1-201ENST00000274901 TISP43B9A030 160 aa9.64□□□□□ -0.87
HMGCLL1-201ENST00000274901 BTBD19C9JJ37 291 aa9.64□□□□□ -0.87
HMGCLL1-201ENST00000274901 GOLGA8SH3BPF8 625 aa9.64□□□□□ -0.87
HMGCLL1-201ENST00000274901 GOLGA8MH3BSY2 632 aa9.64□□□□□ -0.87
HMGCLL1-201ENST00000274901 POLRMTO00411 1230 aaKnown RBP9.64□□□□□ -0.87
HMGCLL1-201ENST00000274901 COL6A2P12110 1019 aa9.64□□□□□ -0.87
HMGCLL1-201ENST00000274901 CPOXP36551 454 aa9.64□□□□□ -0.87
HMGCLL1-201ENST00000274901 CD97P48960 835 aa9.64□□□□□ -0.87
HMGCLL1-201ENST00000274901 CDK8P49336 464 aa9.64□□□□□ -0.87
HMGCLL1-201ENST00000274901 EIF6P56537 245 aaKnown RBP9.64□□□□□ -0.87
HMGCLL1-201ENST00000274901 PPP3CAQ08209 521 aa9.64□□□□□ -0.87
HMGCLL1-201ENST00000274901 ASPHQ12797 758 aa9.64□□□□□ -0.87
HMGCLL1-201ENST00000274901 UBAP2LQ14157 1087 aaKnown RBP9.64□□□□□ -0.87
HMGCLL1-201ENST00000274901 TFDP1Q14186 410 aa9.64□□□□□ -0.87
HMGCLL1-201ENST00000274901 ANKRD20A4Q4UJ75 823 aa9.64□□□□□ -0.87
HMGCLL1-201ENST00000274901 TTBK2Q6IQ55 1244 aa9.64□□□□□ -0.87
HMGCLL1-201ENST00000274901 C1orf228Q6PIY5 440 aa9.64□□□□□ -0.87
HMGCLL1-201ENST00000274901 EFCAB3Q8N7B9 438 aa9.64□□□□□ -0.87
HMGCLL1-201ENST00000274901 SMYD1Q8NB12 490 aa9.64□□□□□ -0.87
HMGCLL1-201ENST00000274901 GRK7Q8WTQ7 553 aa9.64□□□□□ -0.87
HMGCLL1-201ENST00000274901 IRGQQ8WZA9 623 aa9.64□□□□□ -0.87
HMGCLL1-201ENST00000274901 GCNAQ96QF7 691 aa9.64□□□□□ -0.87
HMGCLL1-201ENST00000274901 SIKE1Q9BRV8 207 aa9.64□□□□□ -0.87
HMGCLL1-201ENST00000274901 KLHL4Q9C0H6 718 aa9.64□□□□□ -0.87
HMGCLL1-201ENST00000274901 RANBP17Q9H2T7 1088 aaKnown RBP9.64□□□□□ -0.87
HMGCLL1-201ENST00000274901 JMJD4Q9H9V9 463 aa9.64□□□□□ -0.87
HMGCLL1-201ENST00000274901 GPAMQ9HCL2 828 aa9.64□□□□□ -0.87
HMGCLL1-201ENST00000274901 SENP1Q9P0U3 644 aa9.64□□□□□ -0.87
HMGCLL1-201ENST00000274901 DNAJB4Q9UDY4 337 aa9.64□□□□□ -0.87
HMGCLL1-201ENST00000274901 CIB2O75838 187 aa9.63□□□□□ -0.87
HMGCLL1-201ENST00000274901 ATP6V1B1P15313 513 aa9.63□□□□□ -0.87
HMGCLL1-201ENST00000274901 SSTR1P30872 391 aa9.63□□□□□ -0.87
HMGCLL1-201ENST00000274901 SLC25A3Q00325 362 aa9.63□□□□□ -0.87
HMGCLL1-201ENST00000274901 GSTM4Q03013 218 aa9.63□□□□□ -0.87
HMGCLL1-201ENST00000274901 FOLH1Q04609 750 aa9.63□□□□□ -0.87
HMGCLL1-201ENST00000274901 RALGPS1Q5JS13 557 aa9.63□□□□□ -0.87
HMGCLL1-201ENST00000274901 FAM91A1Q658Y4 838 aa9.63□□□□□ -0.87
HMGCLL1-201ENST00000274901 SLC15A3Q8IY34 581 aa9.63□□□□□ -0.87
HMGCLL1-201ENST00000274901 HIPK4Q8NE63 616 aa9.63□□□□□ -0.87
HMGCLL1-201ENST00000274901 NAV1Q8NEY1 1877 aa9.63□□□□□ -0.87
HMGCLL1-201ENST00000274901 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.63□□□□□ -0.87
HMGCLL1-201ENST00000274901 ETNPPLQ8TBG4 499 aa9.63□□□□□ -0.87
HMGCLL1-201ENST00000274901 KREMEN1Q96MU8 473 aa9.63□□□□□ -0.87
HMGCLL1-201ENST00000274901 FIZ1Q96SL8 496 aa9.63□□□□□ -0.87
HMGCLL1-201ENST00000274901 CORO1BQ9BR76 489 aa9.63□□□□□ -0.87
HMGCLL1-201ENST00000274901 LIN28AQ9H9Z2 209 aaKnown RBP9.63□□□□□ -0.87
HMGCLL1-201ENST00000274901 KLHL11Q9NVR0 708 aa9.63□□□□□ -0.87
HMGCLL1-201ENST00000274901 PPARGC1AQ9UBK2 798 aaKnown RBP9.63□□□□□ -0.87
HMGCLL1-201ENST00000274901 RABGEF1Q9UJ41 708 aa9.63□□□□□ -0.87
HMGCLL1-201ENST00000274901 TELO2Q9Y4R8 837 aa9.63□□□□□ -0.87
HMGCLL1-201ENST00000274901 EMSYQ7Z589 1322 aa9.63□□□□□ -0.87
HMGCLL1-201ENST00000274901 DENND3A2RUS2 1198 aa9.63□□□□□ -0.87
HMGCLL1-201ENST00000274901 CAPN8A6NHC0 703 aa9.63□□□□□ -0.87
HMGCLL1-201ENST00000274901 PRR5-ARHGAP8B1AHC4 643 aa9.63□□□□□ -0.87
HMGCLL1-201ENST00000274901 AP1G1O43747 822 aa9.63□□□□□ -0.87
HMGCLL1-201ENST00000274901 PDE5AO76074 875 aa9.63□□□□□ -0.87
HMGCLL1-201ENST00000274901 DHRS4L1P0CG22 281 aa9.63□□□□□ -0.87
HMGCLL1-201ENST00000274901 SLC16A2P36021 539 aa9.63□□□□□ -0.87
HMGCLL1-201ENST00000274901 ETV4P43268 484 aa9.63□□□□□ -0.87
HMGCLL1-201ENST00000274901 RPL5P46777 297 aaKnown RBP9.63□□□□□ -0.87
HMGCLL1-201ENST00000274901 ARHGAP8P85298 464 aa9.63□□□□□ -0.87
HMGCLL1-201ENST00000274901 DCTN2Q13561 401 aaKnown RBP9.63□□□□□ -0.87
HMGCLL1-201ENST00000274901 CYLC2Q14093 348 aaPredicted RBP9.63□□□□□ -0.87
HMGCLL1-201ENST00000274901 MSS51Q4VC12 460 aa9.63□□□□□ -0.87
HMGCLL1-201ENST00000274901 EPC2Q52LR7 807 aa9.63□□□□□ -0.87
HMGCLL1-201ENST00000274901 EFHC2Q5JST6 749 aa9.63□□□□□ -0.87
HMGCLL1-201ENST00000274901 C1orf220Q5T0J3 134 aa9.63□□□□□ -0.87
HMGCLL1-201ENST00000274901 PRPF39Q86UA1 669 aaKnown RBP9.63□□□□□ -0.87
HMGCLL1-201ENST00000274901 RNF168Q8IYW5 571 aaPredicted RBP9.63□□□□□ -0.87
HMGCLL1-201ENST00000274901 ARHGAP24Q8N264 748 aa9.63□□□□□ -0.87
HMGCLL1-201ENST00000274901 CCDC89Q8N998 374 aa9.63□□□□□ -0.87
HMGCLL1-201ENST00000274901 WDR66Q8TBY9 1149 aa9.63□□□□□ -0.87
HMGCLL1-201ENST00000274901 FNDC8Q8TC99 324 aa9.63□□□□□ -0.87
HMGCLL1-201ENST00000274901 TTC17Q96AE7 1141 aa9.63□□□□□ -0.87
HMGCLL1-201ENST00000274901 SERAC1Q96JX3 654 aa9.63□□□□□ -0.87
HMGCLL1-201ENST00000274901 FAM111AQ96PZ2 611 aa9.63□□□□□ -0.87
HMGCLL1-201ENST00000274901 MECRQ9BV79 373 aa9.63□□□□□ -0.87
HMGCLL1-201ENST00000274901 VPS11Q9H270 941 aa9.63□□□□□ -0.87
HMGCLL1-201ENST00000274901 SMYD3Q9H7B4 428 aa9.63□□□□□ -0.87
HMGCLL1-201ENST00000274901 PFDN4Q9NQP4 134 aa9.63□□□□□ -0.87
HMGCLL1-201ENST00000274901 AGPAT3Q9NRZ7 376 aa9.63□□□□□ -0.87
HMGCLL1-201ENST00000274901 DMAC2Q9NW81 257 aa9.63□□□□□ -0.87
HMGCLL1-201ENST00000274901 BTBD7Q9P203 1132 aa9.63□□□□□ -0.87
HMGCLL1-201ENST00000274901 ANAPC7Q9UJX3 599 aa9.63□□□□□ -0.87
HMGCLL1-201ENST00000274901 GTF3C4Q9UKN8 822 aa9.63□□□□□ -0.87
HMGCLL1-201ENST00000274901 DNM3Q9UQ16 869 aa9.63□□□□□ -0.87
HMGCLL1-201ENST00000274901 ATF5Q9Y2D1 282 aaPredicted RBP9.63□□□□□ -0.87
HMGCLL1-201ENST00000274901 TRIM43BA6NCK2 446 aa9.62□□□□□ -0.87
HMGCLL1-201ENST00000274901 TTLL13PA6NNM8 815 aa9.62□□□□□ -0.87
HMGCLL1-201ENST00000274901 H3BSA7 217 aa9.62□□□□□ -0.87
HMGCLL1-201ENST00000274901 VIL1P09327 827 aaKnown RBP9.62□□□□□ -0.87
HMGCLL1-201ENST00000274901 STIP1P31948 543 aaKnown RBP9.62□□□□□ -0.87
HMGCLL1-201ENST00000274901 GCLMP48507 274 aa9.62□□□□□ -0.87
HMGCLL1-201ENST00000274901 CCR3P51677 355 aa9.62□□□□□ -0.87
HMGCLL1-201ENST00000274901 OXCT1P55809 520 aa9.62□□□□□ -0.87
HMGCLL1-201ENST00000274901 SH3BGRP55822 239 aaPredicted RBP9.62□□□□□ -0.87
HMGCLL1-201ENST00000274901 TAS2R40P59535 323 aa9.62□□□□□ -0.87
HMGCLL1-201ENST00000274901 SNAPC2Q13487 334 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms