RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 CPNE9Q8IYJ1 553 aa9.66□□□□□ -0.86
PDGFC-201ENST00000274071 ZDHHC14Q8IZN3 488 aa9.66□□□□□ -0.86
PDGFC-201ENST00000274071 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.66□□□□□ -0.86
PDGFC-201ENST00000274071 LRRC15Q8TF66 581 aa9.66□□□□□ -0.86
PDGFC-201ENST00000274071 OSCP1Q8WVF1 389 aa9.66□□□□□ -0.86
PDGFC-201ENST00000274071 CNBD2Q96M20 576 aa9.66□□□□□ -0.86
PDGFC-201ENST00000274071 TCF12Q99081 682 aa9.66□□□□□ -0.86
PDGFC-201ENST00000274071 RNF38Q9H0F5 515 aa9.66□□□□□ -0.86
PDGFC-201ENST00000274071 KCNK13Q9HB14 408 aa9.66□□□□□ -0.86
PDGFC-201ENST00000274071 PALMDQ9NP74 551 aa9.66□□□□□ -0.86
PDGFC-201ENST00000274071 HACD3Q9P035 362 aa9.66□□□□□ -0.86
PDGFC-201ENST00000274071 ZSWIM5Q9P217 1185 aa9.66□□□□□ -0.86
PDGFC-201ENST00000274071 PTPN22Q9Y2R2 807 aa9.66□□□□□ -0.86
PDGFC-201ENST00000274071 RABGAP1Q9Y3P9 1069 aa9.66□□□□□ -0.86
PDGFC-201ENST00000274071 PCDHGA8Q9Y5G5 932 aa9.66□□□□□ -0.86
PDGFC-201ENST00000274071 PCDHGA11Q9Y5H2 935 aa9.66□□□□□ -0.86
PDGFC-201ENST00000274071 TSPY2A6NKD2 308 aa9.66□□□□□ -0.86
PDGFC-201ENST00000274071 PP2D1A8MPX8 630 aa9.66□□□□□ -0.86
PDGFC-201ENST00000274071 GPAA1O43292 621 aa9.66□□□□□ -0.86
PDGFC-201ENST00000274071 PEX1O43933 1283 aa9.66□□□□□ -0.86
PDGFC-201ENST00000274071 SIN3BO75182 1162 aa9.66□□□□□ -0.86
PDGFC-201ENST00000274071 PRDM1O75626 825 aa9.66□□□□□ -0.86
PDGFC-201ENST00000274071 RSL1D1O76021 490 aaKnown RBP9.66□□□□□ -0.86
PDGFC-201ENST00000274071 CRYZL1O95825 349 aa9.66□□□□□ -0.86
PDGFC-201ENST00000274071 FYNP06241 537 aa9.66□□□□□ -0.86
PDGFC-201ENST00000274071 TSPY3P0CV98 308 aa9.66□□□□□ -0.86
PDGFC-201ENST00000274071 TSPY8P0CW00 308 aa9.66□□□□□ -0.86
PDGFC-201ENST00000274071 CYP19A1P11511 503 aaPredicted RBP9.66□□□□□ -0.86
PDGFC-201ENST00000274071 IL4RP24394 825 aa9.66□□□□□ -0.86
PDGFC-201ENST00000274071 ARHGAP4P98171 946 aa9.66□□□□□ -0.86
PDGFC-201ENST00000274071 TSPY1Q01534 308 aa9.66□□□□□ -0.86
PDGFC-201ENST00000274071 CREB5Q02930 508 aa9.66□□□□□ -0.86
PDGFC-201ENST00000274071 TRIM28Q13263 835 aaKnown RBP9.66□□□□□ -0.86
PDGFC-201ENST00000274071 CTTNQ14247 550 aaKnown RBP9.66□□□□□ -0.86
PDGFC-201ENST00000274071 CCDC58Q4VC31 144 aa9.66□□□□□ -0.86
PDGFC-201ENST00000274071 TWF2Q6IBS0 349 aaKnown RBP9.66□□□□□ -0.86
PDGFC-201ENST00000274071 CCDC137Q6PK04 289 aaKnown RBP9.66□□□□□ -0.86
PDGFC-201ENST00000274071 VGLL2Q8N8G2 317 aa9.66□□□□□ -0.86
PDGFC-201ENST00000274071 SLC26A7Q8TE54 656 aa9.66□□□□□ -0.86
PDGFC-201ENST00000274071 FAM89AQ96GI7 184 aa9.66□□□□□ -0.86
PDGFC-201ENST00000274071 ZNF594Q96JF6 807 aaPredicted RBP9.66□□□□□ -0.86
PDGFC-201ENST00000274071 FAR2Q96K12 515 aa9.66□□□□□ -0.86
PDGFC-201ENST00000274071 TTC25Q96NG3 672 aa9.66□□□□□ -0.86
PDGFC-201ENST00000274071 DCUN1D5Q9BTE7 237 aa9.66□□□□□ -0.86
PDGFC-201ENST00000274071 RABGEF1Q9UJ41 708 aa9.66□□□□□ -0.86
PDGFC-201ENST00000274071 GTF3C4Q9UKN8 822 aa9.66□□□□□ -0.86
PDGFC-201ENST00000274071 ZMYM2Q9UBW7 1377 aa9.65□□□□□ -0.86
PDGFC-201ENST00000274071 TJP1Q07157 1748 aa9.65□□□□□ -0.86
PDGFC-201ENST00000274071 INHBBP09529 407 aa9.65□□□□□ -0.86
PDGFC-201ENST00000274071 P4HA1P13674 534 aa9.65□□□□□ -0.86
PDGFC-201ENST00000274071 NR4A1P22736 598 aa9.65□□□□□ -0.86
PDGFC-201ENST00000274071 YWHAGP61981 247 aaKnown RBP eCLIP9.65□□□□□ -0.86
PDGFC-201ENST00000274071 CDK16Q00536 496 aa9.65□□□□□ -0.86
PDGFC-201ENST00000274071 SPCS2Q15005 226 aa9.65□□□□□ -0.86
PDGFC-201ENST00000274071 GRIK5Q16478 980 aa9.65□□□□□ -0.86
PDGFC-201ENST00000274071 ASIC2Q16515 512 aa9.65□□□□□ -0.86
PDGFC-201ENST00000274071 RGS21Q2M5E4 152 aa9.65□□□□□ -0.86
PDGFC-201ENST00000274071 ATP6V0D2Q8N8Y2 350 aa9.65□□□□□ -0.86
PDGFC-201ENST00000274071 KIAA0895Q8NCT3 520 aa9.65□□□□□ -0.86
PDGFC-201ENST00000274071 GSDMBQ8TAX9 411 aa9.65□□□□□ -0.86
PDGFC-201ENST00000274071 TAMM41Q96BW9 452 aa9.65□□□□□ -0.86
PDGFC-201ENST00000274071 LSM14BQ9BX40 385 aaKnown RBP9.65□□□□□ -0.86
PDGFC-201ENST00000274071 INPP5FQ9Y2H2 1132 aa9.65□□□□□ -0.86
PDGFC-201ENST00000274071 DIS3Q9Y2L1 958 aaKnown RBP9.65□□□□□ -0.86
PDGFC-201ENST00000274071 LTBP4Q8N2S1 1624 aa9.65□□□□□ -0.86
PDGFC-201ENST00000274071 hCG_1642624A0A1W2PR95 340 aa9.65□□□□□ -0.87
PDGFC-201ENST00000274071 C2orf71A6NGG8 1288 aa9.65□□□□□ -0.87
PDGFC-201ENST00000274071 TMX2-CTNND1H3BSU7 103 aa9.65□□□□□ -0.87
PDGFC-201ENST00000274071 PRPF4O43172 522 aaKnown RBP eCLIP9.65□□□□□ -0.87
PDGFC-201ENST00000274071 UGT1A9O60656 530 aa9.65□□□□□ -0.87
PDGFC-201ENST00000274071 ICMTO60725 284 aa9.65□□□□□ -0.87
PDGFC-201ENST00000274071 HSPA1AP0DMV8 641 aaKnown RBP9.65□□□□□ -0.87
PDGFC-201ENST00000274071 HSPA1BP0DMV9 641 aaKnown RBP9.65□□□□□ -0.87
PDGFC-201ENST00000274071 UGT1A6P19224 532 aa9.65□□□□□ -0.87
PDGFC-201ENST00000274071 UGT1A1P22309 533 aa9.65□□□□□ -0.87
PDGFC-201ENST00000274071 UGT1A4P22310 534 aa9.65□□□□□ -0.87
PDGFC-201ENST00000274071 UGT1A3P35503 534 aa9.65□□□□□ -0.87
PDGFC-201ENST00000274071 UGT1A5P35504 534 aa9.65□□□□□ -0.87
PDGFC-201ENST00000274071 IL15P40933 162 aaPredicted RBP9.65□□□□□ -0.87
PDGFC-201ENST00000274071 ETV3P41162 512 aa9.65□□□□□ -0.87
PDGFC-201ENST00000274071 BTDP43251 543 aa9.65□□□□□ -0.87
PDGFC-201ENST00000274071 ZNF200P98182 395 aaPredicted RBP9.65□□□□□ -0.87
PDGFC-201ENST00000274071 NR1H3Q13133 447 aa9.65□□□□□ -0.87
PDGFC-201ENST00000274071 MTMR2Q13614 643 aa9.65□□□□□ -0.87
PDGFC-201ENST00000274071 TMED2Q15363 201 aa9.65□□□□□ -0.87
PDGFC-201ENST00000274071 LRRC24Q50LG9 513 aa9.65□□□□□ -0.87
PDGFC-201ENST00000274071 XKR5Q6UX68 686 aa9.65□□□□□ -0.87
PDGFC-201ENST00000274071 CYFIP1Q7L576 1253 aa9.65□□□□□ -0.87
PDGFC-201ENST00000274071 IRF2BP2Q7Z5L9 587 aa9.65□□□□□ -0.87
PDGFC-201ENST00000274071 TRABD2AQ86V40 505 aa9.65□□□□□ -0.87
PDGFC-201ENST00000274071 LSMEM2Q8N112 164 aa9.65□□□□□ -0.87
PDGFC-201ENST00000274071 CADM3Q8N126 398 aa9.65□□□□□ -0.87
PDGFC-201ENST00000274071 DCLK2Q8N568 766 aa9.65□□□□□ -0.87
PDGFC-201ENST00000274071 PSPC1Q8WXF1 523 aaKnown RBP9.65□□□□□ -0.87
PDGFC-201ENST00000274071 TNFRSF25Q93038 417 aa9.65□□□□□ -0.87
PDGFC-201ENST00000274071 TRIM55Q9BYV6 548 aa9.65□□□□□ -0.87
PDGFC-201ENST00000274071 UGT1A7Q9HAW7 530 aa9.65□□□□□ -0.87
PDGFC-201ENST00000274071 UGT1A10Q9HAW8 530 aa9.65□□□□□ -0.87
PDGFC-201ENST00000274071 UGT1A8Q9HAW9 530 aa9.65□□□□□ -0.87
PDGFC-201ENST00000274071 OSGEPQ9NPF4 335 aa9.65□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms