RNA–Protein interactions for RNA: ENST00000265362.8

SEMA3A-201, Transcript of semaphorin 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA3A, Length 8,225 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-201ENST00000265362 SLX4Q8IY92 1834 aa6.19□□□□□ -1.42
SEMA3A-201ENST00000265362 SYNJ2BP-COX16A0A087WUM0 186 aa6.19□□□□□ -1.42
SEMA3A-201ENST00000265362 C3orf70A6NLC5 250 aaPredicted RBP6.19□□□□□ -1.42
SEMA3A-201ENST00000265362 H3BRB1 525 aa6.19□□□□□ -1.42
SEMA3A-201ENST00000265362 PTGER2P43116 358 aa6.19□□□□□ -1.42
SEMA3A-201ENST00000265362 PPIL2Q13356 520 aa6.19□□□□□ -1.42
SEMA3A-201ENST00000265362 NBPF20Q3BBV1 942 aa6.19□□□□□ -1.42
SEMA3A-201ENST00000265362 NXNQ6DKJ4 435 aa6.19□□□□□ -1.42
SEMA3A-201ENST00000265362 IQSEC1Q6DN90 963 aa6.19□□□□□ -1.42
SEMA3A-201ENST00000265362 KATNAL2Q8IYT4 538 aa6.19□□□□□ -1.42
SEMA3A-201ENST00000265362 MCOLN2Q8IZK6 566 aa6.19□□□□□ -1.42
SEMA3A-201ENST00000265362 AENQ8WTP8 325 aaKnown RBP6.19□□□□□ -1.42
SEMA3A-201ENST00000265362 ZKSCAN4Q969J2 545 aaPredicted RBP6.19□□□□□ -1.42
SEMA3A-201ENST00000265362 ANKRD27Q96NW4 1050 aa6.19□□□□□ -1.42
SEMA3A-201ENST00000265362 INPP4AQ96PE3 977 aaPredicted RBP6.19□□□□□ -1.42
SEMA3A-201ENST00000265362 MTMR12Q9C0I1 747 aa6.19□□□□□ -1.42
SEMA3A-201ENST00000265362 TUT1Q9H6E5 874 aaKnown RBP6.19□□□□□ -1.42
SEMA3A-201ENST00000265362 CYP39A1Q9NYL5 469 aa6.19□□□□□ -1.42
SEMA3A-201ENST00000265362 COX16Q9P0S2 106 aa6.19□□□□□ -1.42
SEMA3A-201ENST00000265362 USP18Q9UMW8 372 aa6.19□□□□□ -1.42
SEMA3A-201ENST00000265362 ABL1P00519 1130 aa6.19□□□□□ -1.42
SEMA3A-201ENST00000265362 PTPRAP18433 802 aa6.19□□□□□ -1.42
SEMA3A-201ENST00000265362 RWDD4Q6NW29 188 aaKnown RBP6.19□□□□□ -1.42
SEMA3A-201ENST00000265362 CATSPERGQ6ZRH7 1159 aa6.19□□□□□ -1.42
SEMA3A-201ENST00000265362 REPS2Q8NFH8 660 aa6.19□□□□□ -1.42
SEMA3A-201ENST00000265362 NTPCRQ9BSD7 190 aaKnown RBP6.19□□□□□ -1.42
SEMA3A-201ENST00000265362 UPF3AQ9H1J1 476 aaKnown RBP6.19□□□□□ -1.42
SEMA3A-201ENST00000265362 SHANK3Q9BYB0 1731 aa6.18□□□□□ -1.42
SEMA3A-201ENST00000265362 TCP11X1B4DZS4 312 aa6.18□□□□□ -1.42
SEMA3A-201ENST00000265362 GPR182O15218 404 aa6.18□□□□□ -1.42
SEMA3A-201ENST00000265362 CST8O60676 142 aa6.18□□□□□ -1.42
SEMA3A-201ENST00000265362 TGM2P21980 687 aa6.18□□□□□ -1.42
SEMA3A-201ENST00000265362 EPHX2P34913 555 aa6.18□□□□□ -1.42
SEMA3A-201ENST00000265362 GEMIN4P57678 1058 aaKnown RBP6.18□□□□□ -1.42
SEMA3A-201ENST00000265362 NLRP11P59045 1033 aaKnown RBP6.18□□□□□ -1.42
SEMA3A-201ENST00000265362 ART3Q13508 389 aa6.18□□□□□ -1.42
SEMA3A-201ENST00000265362 GRIK5Q16478 980 aa6.18□□□□□ -1.42
SEMA3A-201ENST00000265362 TTC39BQ5VTQ0 682 aaPredicted RBP6.18□□□□□ -1.42
SEMA3A-201ENST00000265362 GLB1LQ6UWU2 654 aa6.18□□□□□ -1.42
SEMA3A-201ENST00000265362 POLNQ7Z5Q5 900 aa6.18□□□□□ -1.42
SEMA3A-201ENST00000265362 GSPT2Q8IYD1 628 aaKnown RBP6.18□□□□□ -1.42
SEMA3A-201ENST00000265362 GDAP1Q8TB36 358 aa6.18□□□□□ -1.42
SEMA3A-201ENST00000265362 ZNF606Q8WXB4 792 aa6.18□□□□□ -1.42
SEMA3A-201ENST00000265362 SHC3Q92529 594 aa6.18□□□□□ -1.42
SEMA3A-201ENST00000265362 LRRC39Q96DD0 335 aa6.18□□□□□ -1.42
SEMA3A-201ENST00000265362 DDX27Q96GQ7 796 aaKnown RBP6.18□□□□□ -1.42
SEMA3A-201ENST00000265362 CDK5RAP1Q96SZ6 601 aaKnown RBP6.18□□□□□ -1.42
SEMA3A-201ENST00000265362 TRIM15Q9C019 465 aa6.18□□□□□ -1.42
SEMA3A-201ENST00000265362 MTO1Q9Y2Z2 717 aaKnown RBP6.18□□□□□ -1.42
SEMA3A-201ENST00000265362 C10orf71Q711Q0 1435 aa6.18□□□□□ -1.42
SEMA3A-201ENST00000265362 TPD52P55327 224 aaPredicted RBP6.18□□□□□ -1.42
SEMA3A-201ENST00000265362 MYL6P60660 151 aa6.18□□□□□ -1.42
SEMA3A-201ENST00000265362 AP1B1Q10567 949 aa6.18□□□□□ -1.42
SEMA3A-201ENST00000265362 MAPRE2Q15555 327 aa6.18□□□□□ -1.42
SEMA3A-201ENST00000265362 TAF1CQ15572 869 aaPredicted RBP6.18□□□□□ -1.42
SEMA3A-201ENST00000265362 Q3C1V9 767 aa6.18□□□□□ -1.42
SEMA3A-201ENST00000265362 SETD3Q86TU7 594 aaPredicted RBP6.18□□□□□ -1.42
SEMA3A-201ENST00000265362 IRF2BP1Q8IU81 584 aa6.18□□□□□ -1.42
SEMA3A-201ENST00000265362 SOCS4Q8WXH5 440 aa6.18□□□□□ -1.42
SEMA3A-201ENST00000265362 CENPTQ96BT3 561 aa6.18□□□□□ -1.42
SEMA3A-201ENST00000265362 ZBTB9Q96C00 473 aa6.18□□□□□ -1.42
SEMA3A-201ENST00000265362 TMEM176AQ96HP8 235 aa6.18□□□□□ -1.42
SEMA3A-201ENST00000265362 SIKE1Q9BRV8 207 aa6.18□□□□□ -1.42
SEMA3A-201ENST00000265362 KDM4CQ9H3R0 1056 aa6.18□□□□□ -1.42
SEMA3A-201ENST00000265362 GPRC5CQ9NQ84 441 aa6.18□□□□□ -1.42
SEMA3A-201ENST00000265362 GDF3Q9NR23 364 aa6.18□□□□□ -1.42
SEMA3A-201ENST00000265362 CDY2AQ9Y6F7 541 aa6.18□□□□□ -1.42
SEMA3A-201ENST00000265362 CDY1Q9Y6F8 540 aa6.18□□□□□ -1.42
SEMA3A-201ENST00000265362 RREB1Q92766 1687 aa6.18□□□□□ -1.42
SEMA3A-201ENST00000265362 NUP214P35658 2090 aaPredicted RBP6.18□□□□□ -1.42
SEMA3A-201ENST00000265362 UNCXA6NJT0 531 aa6.18□□□□□ -1.42
SEMA3A-201ENST00000265362 IGF2BP3O00425 579 aaKnown RBP eCLIP6.18□□□□□ -1.42
SEMA3A-201ENST00000265362 DDX3XO00571 662 aaKnown RBP eCLIP6.18□□□□□ -1.42
SEMA3A-201ENST00000265362 ODC1P11926 461 aa6.18□□□□□ -1.42
SEMA3A-201ENST00000265362 PTPN11Q06124 597 aaPredicted RBP6.18□□□□□ -1.42
SEMA3A-201ENST00000265362 LLGL1Q15334 1064 aa6.18□□□□□ -1.42
SEMA3A-201ENST00000265362 TRPM8Q7Z2W7 1104 aa6.18□□□□□ -1.42
SEMA3A-201ENST00000265362 MAML1Q92585 1016 aa6.18□□□□□ -1.42
SEMA3A-201ENST00000265362 MFSD14AQ96MC6 490 aa6.18□□□□□ -1.42
SEMA3A-201ENST00000265362 DMGDHQ9UI17 866 aaKnown RBP6.18□□□□□ -1.42
SEMA3A-201ENST00000265362 ZFP69BQ9UJL9 534 aa6.18□□□□□ -1.42
SEMA3A-201ENST00000265362 GRID1Q9ULK0 1009 aa6.18□□□□□ -1.42
SEMA3A-201ENST00000265362 ASTN1O14525 1302 aa6.18□□□□□ -1.42
SEMA3A-201ENST00000265362 TYK2P29597 1187 aa6.18□□□□□ -1.42
SEMA3A-201ENST00000265362 HADHBP55084 474 aaKnown RBP6.18□□□□□ -1.42
SEMA3A-201ENST00000265362 GUCY1A3Q02108 690 aa6.18□□□□□ -1.42
SEMA3A-201ENST00000265362 NPY5RQ15761 445 aa6.18□□□□□ -1.42
SEMA3A-201ENST00000265362 ARSHQ5FYA8 562 aa6.18□□□□□ -1.42
SEMA3A-201ENST00000265362 TEDDM1Q5T9Z0 273 aa6.18□□□□□ -1.42
SEMA3A-201ENST00000265362 SPATA21Q7Z572 469 aa6.18□□□□□ -1.42
SEMA3A-201ENST00000265362 TBC1D1Q86TI0 1168 aaPredicted RBP6.18□□□□□ -1.42
SEMA3A-201ENST00000265362 TMEM139Q8IV31 216 aa6.18□□□□□ -1.42
SEMA3A-201ENST00000265362 AGGF1Q8N302 714 aaeCLIP6.18□□□□□ -1.42
SEMA3A-201ENST00000265362 PPM1NQ8N819 430 aa6.18□□□□□ -1.42
SEMA3A-201ENST00000265362 TMEM161BQ8NDZ6 487 aa6.18□□□□□ -1.42
SEMA3A-201ENST00000265362 EPS8L1Q8TE68 723 aa6.18□□□□□ -1.42
SEMA3A-201ENST00000265362 TFB1MQ8WVM0 346 aaKnown RBP6.18□□□□□ -1.42
SEMA3A-201ENST00000265362 CASKIN2Q8WXE0 1202 aa6.18□□□□□ -1.42
SEMA3A-201ENST00000265362 XPO6Q96QU8 1125 aaKnown RBP6.18□□□□□ -1.42
SEMA3A-201ENST00000265362 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms