RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 SYT15Q9BQS2 421 aa15.21■□□□□ 0.03
SSBP1-201ENST00000265304 FAM207AQ9NSI2 230 aaPredicted RBP15.21■□□□□ 0.03
SSBP1-201ENST00000265304 PCDHGC5Q9Y5F6 944 aa15.21■□□□□ 0.03
SSBP1-201ENST00000265304 CDY1Q9Y6F8 540 aa15.21■□□□□ 0.03
SSBP1-201ENST00000265304 NOTCH4Q99466 2003 aa15.21■□□□□ 0.02
SSBP1-201ENST00000265304 PATJQ8NI35 1801 aa15.2■□□□□ 0.02
SSBP1-201ENST00000265304 DENND4CQ5VZ89 1909 aa15.2■□□□□ 0.02
SSBP1-201ENST00000265304 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.2■□□□□ 0.02
SSBP1-201ENST00000265304 MYBPHLA2RUH7 354 aa15.2■□□□□ 0.02
SSBP1-201ENST00000265304 F8VZ95 297 aa15.2■□□□□ 0.02
SSBP1-201ENST00000265304 NCK2O43639 380 aa15.2■□□□□ 0.02
SSBP1-201ENST00000265304 MAGEA11P43364 429 aa15.2■□□□□ 0.02
SSBP1-201ENST00000265304 POLR2FP61218 127 aaKnown RBP15.2■□□□□ 0.02
SSBP1-201ENST00000265304 TSPY1Q01534 308 aa15.2■□□□□ 0.02
SSBP1-201ENST00000265304 TBX2Q13207 712 aaPredicted RBP15.2■□□□□ 0.02
SSBP1-201ENST00000265304 DRAP1Q14919 205 aaPredicted RBP15.2■□□□□ 0.02
SSBP1-201ENST00000265304 PLPP4Q5VZY2 271 aa15.2■□□□□ 0.02
SSBP1-201ENST00000265304 ARHGAP17Q68EM7 881 aa15.2■□□□□ 0.02
SSBP1-201ENST00000265304 SPECC1LQ69YQ0 1117 aa15.2■□□□□ 0.02
SSBP1-201ENST00000265304 SCARA5Q6ZMJ2 495 aa15.2■□□□□ 0.02
SSBP1-201ENST00000265304 PAQR9Q6ZVX9 377 aa15.2■□□□□ 0.02
SSBP1-201ENST00000265304 DEFB123Q8N688 67 aa15.2■□□□□ 0.02
SSBP1-201ENST00000265304 EFHBQ8N7U6 833 aa15.2■□□□□ 0.02
SSBP1-201ENST00000265304 MICAL1Q8TDZ2 1067 aa15.2■□□□□ 0.02
SSBP1-201ENST00000265304 SYN2Q92777 582 aaPredicted RBP15.2■□□□□ 0.02
SSBP1-201ENST00000265304 PPP2R3CQ969Q6 453 aa15.2■□□□□ 0.02
SSBP1-201ENST00000265304 TMEM176AQ96HP8 235 aa15.2■□□□□ 0.02
SSBP1-201ENST00000265304 CEP295NLQ96MC4 621 aa15.2■□□□□ 0.02
SSBP1-201ENST00000265304 TMEM209Q96SK2 561 aa15.2■□□□□ 0.02
SSBP1-201ENST00000265304 HNRNPABQ99729 332 aaKnown RBP15.2■□□□□ 0.02
SSBP1-201ENST00000265304 RHOBTB2Q9BYZ6 727 aa15.2■□□□□ 0.02
SSBP1-201ENST00000265304 TRIM5Q9C035 493 aa15.2■□□□□ 0.02
SSBP1-201ENST00000265304 DNAI2Q9GZS0 605 aa15.2■□□□□ 0.02
SSBP1-201ENST00000265304 PLEKHA4Q9H4M7 779 aa15.2■□□□□ 0.02
SSBP1-201ENST00000265304 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.2■□□□□ 0.023e-8■■■■■ 34.9
SSBP1-201ENST00000265304 HMGXB4Q9UGU5 601 aa15.2■□□□□ 0.02
SSBP1-201ENST00000265304 CAPN11Q9UMQ6 739 aa15.2■□□□□ 0.02
SSBP1-201ENST00000265304 C2CD2LO14523 706 aa15.19■□□□□ 0.02
SSBP1-201ENST00000265304 TGM5O43548 720 aa15.19■□□□□ 0.02
SSBP1-201ENST00000265304 HCRTO43612 131 aa15.19■□□□□ 0.02
SSBP1-201ENST00000265304 ATP2C2O75185 946 aa15.19■□□□□ 0.02
SSBP1-201ENST00000265304 POU2F2P09086 479 aa15.19■□□□□ 0.02
SSBP1-201ENST00000265304 PDGFRBP09619 1106 aa15.19■□□□□ 0.02
SSBP1-201ENST00000265304 RPL17P18621 184 aaKnown RBP15.19■□□□□ 0.02
SSBP1-201ENST00000265304 CDC25BP30305 580 aa15.19■□□□□ 0.02
SSBP1-201ENST00000265304 HNRNPH3P31942 346 aaKnown RBP15.19■□□□□ 0.02
SSBP1-201ENST00000265304 CLCN1P35523 988 aa15.19■□□□□ 0.02
SSBP1-201ENST00000265304 TMEM270Q6UE05 265 aa15.19■□□□□ 0.02
SSBP1-201ENST00000265304 ADGRD2Q7Z7M1 963 aa15.19■□□□□ 0.02
SSBP1-201ENST00000265304 FMNL3Q8IVF7 1028 aa15.19■□□□□ 0.02
SSBP1-201ENST00000265304 SPPL2BQ8TCT7 592 aa15.19■□□□□ 0.02
SSBP1-201ENST00000265304 TLE6Q9H808 572 aa15.19■□□□□ 0.02
SSBP1-201ENST00000265304 TMLHEQ9NVH6 421 aa15.19■□□□□ 0.02
SSBP1-201ENST00000265304 AIPL1Q9NZN9 384 aa15.19■□□□□ 0.02
SSBP1-201ENST00000265304 FBXW11Q9UKB1 542 aa15.19■□□□□ 0.02
SSBP1-201ENST00000265304 GTF3C4Q9UKN8 822 aa15.19■□□□□ 0.02
SSBP1-201ENST00000265304 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.19■□□□□ 0.02
SSBP1-201ENST00000265304 MTMR11A4FU01 709 aa15.18■□□□□ 0.02
SSBP1-201ENST00000265304 GYPCP04921 128 aa15.18■□□□□ 0.02
SSBP1-201ENST00000265304 VDRP11473 427 aa15.18■□□□□ 0.02
SSBP1-201ENST00000265304 CD58P19256 250 aa15.18■□□□□ 0.02
SSBP1-201ENST00000265304 TRIM21P19474 475 aaKnown RBP15.18■□□□□ 0.02
SSBP1-201ENST00000265304 SOX5P35711 763 aa15.18■□□□□ 0.02
SSBP1-201ENST00000265304 BPIFB4P59827 614 aa15.18■□□□□ 0.02
SSBP1-201ENST00000265304 HYAL1Q12794 435 aa15.18■□□□□ 0.02
SSBP1-201ENST00000265304 ADAM15Q13444 863 aa15.18■□□□□ 0.02
SSBP1-201ENST00000265304 TRIM14Q14142 442 aa15.18■□□□□ 0.02
SSBP1-201ENST00000265304 STILQ15468 1287 aa15.18■□□□□ 0.02
SSBP1-201ENST00000265304 CNGA2Q16280 664 aa15.18■□□□□ 0.02
SSBP1-201ENST00000265304 PKDCCQ504Y2 493 aa15.18■□□□□ 0.02
SSBP1-201ENST00000265304 VSTM1Q6UX27 236 aa15.18■□□□□ 0.02
SSBP1-201ENST00000265304 RNF19BQ6ZMZ0 732 aa15.18■□□□□ 0.02
SSBP1-201ENST00000265304 IRF2BP2Q7Z5L9 587 aa15.18■□□□□ 0.02
SSBP1-201ENST00000265304 ACOT1Q86TX2 421 aa15.18■□□□□ 0.02
SSBP1-201ENST00000265304 FUKQ8N0W3 1084 aa15.18■□□□□ 0.02
SSBP1-201ENST00000265304 RBBP8NLQ8NC74 664 aaPredicted RBP15.18■□□□□ 0.02
SSBP1-201ENST00000265304 PCED1BQ96HM7 432 aa15.18■□□□□ 0.02
SSBP1-201ENST00000265304 GAS2L1Q99501 681 aaPredicted RBP15.18■□□□□ 0.02
SSBP1-201ENST00000265304 ZSWIM1Q9BR11 485 aa15.18■□□□□ 0.02
SSBP1-201ENST00000265304 NUCKS1Q9H1E3 243 aaKnown RBP15.18■□□□□ 0.02
SSBP1-201ENST00000265304 DPEP3Q9H4B8 488 aa15.18■□□□□ 0.02
SSBP1-201ENST00000265304 CSNK1G1Q9HCP0 422 aa15.18■□□□□ 0.02
SSBP1-201ENST00000265304 PCDHB4Q9Y5E5 795 aa15.18■□□□□ 0.02
SSBP1-201ENST00000265304 HCFC2Q9Y5Z7 792 aa15.18■□□□□ 0.02
SSBP1-201ENST00000265304 O00370 1275 aa15.17■□□□□ 0.02
SSBP1-201ENST00000265304 GLUD1P00367 558 aa15.17■□□□□ 0.02
SSBP1-201ENST00000265304 ACAT1P24752 427 aaKnown RBP15.17■□□□□ 0.02
SSBP1-201ENST00000265304 KLRC2P26717 231 aa15.17■□□□□ 0.02
SSBP1-201ENST00000265304 HOXA9P31269 272 aa15.17■□□□□ 0.02
SSBP1-201ENST00000265304 PRKCIP41743 596 aa15.17■□□□□ 0.02
SSBP1-201ENST00000265304 STAT1P42224 750 aa15.17■□□□□ 0.02
SSBP1-201ENST00000265304 ZBED6P86452 979 aa15.17■□□□□ 0.02
SSBP1-201ENST00000265304 ARHGAP44Q17R89 818 aa15.17■□□□□ 0.02
SSBP1-201ENST00000265304 TCEAL5Q5H9L2 206 aa15.17■□□□□ 0.02
SSBP1-201ENST00000265304 LCLAT1Q6UWP7 414 aa15.17■□□□□ 0.02
SSBP1-201ENST00000265304 C4orf50Q6ZRC1 276 aa15.17■□□□□ 0.02
SSBP1-201ENST00000265304 Q7L0L9 218 aa15.17■□□□□ 0.02
SSBP1-201ENST00000265304 DRC7Q8IY82 874 aa15.17■□□□□ 0.02
SSBP1-201ENST00000265304 C12orf29Q8N999 325 aa15.17■□□□□ 0.02
SSBP1-201ENST00000265304 CMASQ8NFW8 434 aaPredicted RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms