RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 COPAP53621 1224 aa18.74■□□□□ 0.59
COL5A3-201ENST00000264828 VPS72Q15906 364 aa18.74■□□□□ 0.59
COL5A3-201ENST00000264828 TBC1D19Q8N5T2 526 aa18.74■□□□□ 0.59
COL5A3-201ENST00000264828 ZNF669Q96BR6 464 aaPredicted RBP18.74■□□□□ 0.59
COL5A3-201ENST00000264828 PLA2G12BQ9BX93 195 aa18.74■□□□□ 0.59
COL5A3-201ENST00000264828 CDY2AQ9Y6F7 541 aa18.74■□□□□ 0.59
COL5A3-201ENST00000264828 CDY1Q9Y6F8 540 aa18.74■□□□□ 0.59
COL5A3-201ENST00000264828 RNF103O00237 685 aa18.73■□□□□ 0.59
COL5A3-201ENST00000264828 PPIL6Q8IXY8 311 aa18.73■□□□□ 0.59
COL5A3-201ENST00000264828 CCDC33Q8N5R6 958 aa18.73■□□□□ 0.59
COL5A3-201ENST00000264828 PNPLA6Q8IY17 1366 aa18.73■□□□□ 0.59
COL5A3-201ENST00000264828 LINC00854A0A1B0GVQ3 168 aa18.73■□□□□ 0.59
COL5A3-201ENST00000264828 ZNF189O75820 626 aaPredicted RBP18.73■□□□□ 0.59
COL5A3-201ENST00000264828 RHOBTB1O94844 696 aa18.73■□□□□ 0.59
COL5A3-201ENST00000264828 ALBP02768 609 aa18.73■□□□□ 0.59
COL5A3-201ENST00000264828 PLEKP08567 350 aaPredicted RBP18.73■□□□□ 0.59
COL5A3-201ENST00000264828 TMEM253P0C7T8 217 aa18.73■□□□□ 0.59
COL5A3-201ENST00000264828 NME5P56597 212 aa18.73■□□□□ 0.59
COL5A3-201ENST00000264828 IGDCC4Q8TDY8 1250 aa18.73■□□□□ 0.59
COL5A3-201ENST00000264828 HERC5Q9UII4 1024 aaKnown RBP18.73■□□□□ 0.59
COL5A3-201ENST00000264828 PHTF1Q9UMS5 762 aa18.73■□□□□ 0.59
COL5A3-201ENST00000264828 SPATA31A1Q5TZJ5 1347 aa18.73■□□□□ 0.59
COL5A3-201ENST00000264828 TADA2AO75478 443 aa18.73■□□□□ 0.59
COL5A3-201ENST00000264828 SKAP2O75563 359 aaPredicted RBP18.73■□□□□ 0.59
COL5A3-201ENST00000264828 CHRM3P20309 590 aa18.73■□□□□ 0.59
COL5A3-201ENST00000264828 MIER2Q8N344 545 aa18.73■□□□□ 0.59
COL5A3-201ENST00000264828 PNMA8BQ9ULN7 279 aaPredicted RBP18.73■□□□□ 0.59
COL5A3-201ENST00000264828 PDS5AQ29RF7 1337 aaKnown RBP18.73■□□□□ 0.59
COL5A3-201ENST00000264828 YAF2Q8IY57 180 aa18.73■□□□□ 0.59
COL5A3-201ENST00000264828 DTNAQ9Y4J8 743 aa18.73■□□□□ 0.59
COL5A3-201ENST00000264828 TRIM49D1C9J1S8 452 aa18.73■□□□□ 0.59
COL5A3-201ENST00000264828 DGAT1O75907 488 aa18.73■□□□□ 0.59
COL5A3-201ENST00000264828 SLC16A1P53985 500 aa18.73■□□□□ 0.59
COL5A3-201ENST00000264828 SEPT3Q9UH03 358 aa18.73■□□□□ 0.59
COL5A3-201ENST00000264828 CTCFP49711 727 aaPredicted RBP18.72■□□□□ 0.59
COL5A3-201ENST00000264828 CENPCQ03188 943 aa18.72■□□□□ 0.59
COL5A3-201ENST00000264828 KRT35Q92764 455 aa18.72■□□□□ 0.59
COL5A3-201ENST00000264828 PNKPQ96T60 521 aa18.72■□□□□ 0.59
COL5A3-201ENST00000264828 TIPINQ9BVW5 301 aa18.72■□□□□ 0.59
COL5A3-201ENST00000264828 HNRNPRO43390 633 aaKnown RBP18.72■□□□□ 0.59
COL5A3-201ENST00000264828 NSUN4Q96CB9 384 aaKnown RBP18.72■□□□□ 0.59
COL5A3-201ENST00000264828 ZFP42Q96MM3 310 aa18.72■□□□□ 0.59
COL5A3-201ENST00000264828 RERGLQ9H628 205 aa18.72■□□□□ 0.59
COL5A3-201ENST00000264828 SENP2Q9HC62 589 aa18.72■□□□□ 0.59
COL5A3-201ENST00000264828 CAPN10Q9HC96 672 aa18.72■□□□□ 0.59
COL5A3-201ENST00000264828 PTPRMP28827 1452 aa18.72■□□□□ 0.59
COL5A3-201ENST00000264828 A0A0G2JLW4 131 aa18.72■□□□□ 0.59
COL5A3-201ENST00000264828 A0A1W2PQJ5 194 aa18.72■□□□□ 0.59
COL5A3-201ENST00000264828 KCNJ6P48051 423 aa18.72■□□□□ 0.59
COL5A3-201ENST00000264828 BAATQ14032 418 aaPredicted RBP18.72■□□□□ 0.59
COL5A3-201ENST00000264828 AASDHQ4L235 1098 aaPredicted RBP18.72■□□□□ 0.59
COL5A3-201ENST00000264828 THAP2Q9H0W7 228 aa18.72■□□□□ 0.59
COL5A3-201ENST00000264828 ELP3Q9H9T3 547 aa18.72■□□□□ 0.59
COL5A3-201ENST00000264828 NSMCE4AQ9NXX6 385 aa18.72■□□□□ 0.59
COL5A3-201ENST00000264828 MZF1P28698 734 aaPredicted RBP18.72■□□□□ 0.59
COL5A3-201ENST00000264828 MFSD14CQ5VZR4 134 aa18.72■□□□□ 0.59
COL5A3-201ENST00000264828 PSD3Q9NYI0 1048 aa18.72■□□□□ 0.59
COL5A3-201ENST00000264828 SMNDC1O75940 238 aaKnown RBP eCLIP18.72■□□□□ 0.59
COL5A3-201ENST00000264828 TFE3P19532 575 aaPredicted RBP18.72■□□□□ 0.59
COL5A3-201ENST00000264828 MRPS35P82673 323 aaKnown RBP18.72■□□□□ 0.59
COL5A3-201ENST00000264828 ZNF543Q08ER8 600 aa18.72■□□□□ 0.59
COL5A3-201ENST00000264828 PDK1Q15118 436 aa18.72■□□□□ 0.59
COL5A3-201ENST00000264828 TSGA10IPQ3SY00 556 aa18.72■□□□□ 0.59
COL5A3-201ENST00000264828 CYB5D1Q6P9G0 228 aa18.72■□□□□ 0.59
COL5A3-201ENST00000264828 DENND5BQ6ZUT9 1274 aa18.72■□□□□ 0.59
COL5A3-201ENST00000264828 MMGT1Q8N4V1 131 aa18.72■□□□□ 0.59
COL5A3-201ENST00000264828 MTMR4Q9NYA4 1195 aa18.72■□□□□ 0.59
COL5A3-201ENST00000264828 PGK2P07205 417 aa18.71■□□□□ 0.59
COL5A3-201ENST00000264828 TCF3P15923 654 aa18.71■□□□□ 0.59
COL5A3-201ENST00000264828 XKR3Q5GH77 459 aa18.71■□□□□ 0.59
COL5A3-201ENST00000264828 KLHDC7AQ5VTJ3 777 aa18.71■□□□□ 0.59
COL5A3-201ENST00000264828 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.71■□□□□ 0.59
COL5A3-201ENST00000264828 RSAD1Q9HA92 442 aa18.71■□□□□ 0.59
COL5A3-201ENST00000264828 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.71■□□□□ 0.59
COL5A3-201ENST00000264828 HEY2Q9UBP5 337 aa18.71■□□□□ 0.59
COL5A3-201ENST00000264828 ASB14A6NK59 587 aa18.71■□□□□ 0.59
COL5A3-201ENST00000264828 RSPH10B2B2RC85 870 aa18.71■□□□□ 0.59
COL5A3-201ENST00000264828 KIAA0391O15091 583 aaKnown RBP18.71■□□□□ 0.59
COL5A3-201ENST00000264828 RSPH10BP0C881 870 aa18.71■□□□□ 0.59
COL5A3-201ENST00000264828 ARHGEF7Q14155 803 aa18.71■□□□□ 0.59
COL5A3-201ENST00000264828 ECSITQ9BQ95 431 aa18.71■□□□□ 0.59
COL5A3-201ENST00000264828 STILQ15468 1287 aa18.71■□□□□ 0.59
COL5A3-201ENST00000264828 RIBC1Q8N443 379 aaPredicted RBP18.71■□□□□ 0.59
COL5A3-201ENST00000264828 FEZF2Q8TBJ5 459 aa18.71■□□□□ 0.59
COL5A3-201ENST00000264828 PXDNLA1KZ92 1463 aa18.71■□□□□ 0.59
COL5A3-201ENST00000264828 INO80Q9ULG1 1556 aaPredicted RBP18.71■□□□□ 0.59
COL5A3-201ENST00000264828 ZCCHC18P0CG32 403 aa18.71■□□□□ 0.59
COL5A3-201ENST00000264828 CORO7P57737 925 aa18.71■□□□□ 0.59
COL5A3-201ENST00000264828 POU4F1Q01851 419 aa18.71■□□□□ 0.59
COL5A3-201ENST00000264828 BBS7Q8IWZ6 715 aa18.71■□□□□ 0.59
COL5A3-201ENST00000264828 MICALL2Q8IY33 904 aa18.71■□□□□ 0.59
COL5A3-201ENST00000264828 PPCSQ9HAB8 311 aa18.71■□□□□ 0.59
COL5A3-201ENST00000264828 NCF1BA6NI72 391 aaPredicted RBP18.7■□□□□ 0.58
COL5A3-201ENST00000264828 NCF1CA8MVU1 366 aaPredicted RBP18.7■□□□□ 0.58
COL5A3-201ENST00000264828 NCF1P14598 390 aaPredicted RBP18.7■□□□□ 0.58
COL5A3-201ENST00000264828 TMEM8AQ9HCN3 771 aa18.7■□□□□ 0.58
COL5A3-201ENST00000264828 RIC8BQ9NVN3 520 aa18.7■□□□□ 0.58
COL5A3-201ENST00000264828 C6orf203Q9P0P8 240 aaPredicted RBP18.7■□□□□ 0.58
COL5A3-201ENST00000264828 FLT1P17948 1338 aa18.7■□□□□ 0.58
COL5A3-201ENST00000264828 SPAG6O75602 509 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms