RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 PCSK1P29120 753 aa17.24■□□□□ 0.35
USE1-201ENST00000263897 STXBP5Q5T5C0 1151 aa17.24■□□□□ 0.35
USE1-201ENST00000263897 SLC9A9Q8IVB4 645 aa17.24■□□□□ 0.35
USE1-201ENST00000263897 ARID3BQ8IVW6 561 aaPredicted RBP17.24■□□□□ 0.35
USE1-201ENST00000263897 FSIP1Q8NA03 581 aa17.24■□□□□ 0.35
USE1-201ENST00000263897 PJA1Q8NG27 643 aa17.24■□□□□ 0.35
USE1-201ENST00000263897 DEPDC1BQ8WUY9 529 aa17.24■□□□□ 0.35
USE1-201ENST00000263897 DNASE1L2Q92874 299 aa17.24■□□□□ 0.35
USE1-201ENST00000263897 IRF7Q92985 503 aa17.24■□□□□ 0.35
USE1-201ENST00000263897 NELL2Q99435 816 aa17.24■□□□□ 0.35
USE1-201ENST00000263897 MKNK1Q9BUB5 465 aa17.24■□□□□ 0.35
USE1-201ENST00000263897 KCTD10Q9H3F6 313 aa17.24■□□□□ 0.35
USE1-201ENST00000263897 IL21Q9HBE4 155 aa17.24■□□□□ 0.35
USE1-201ENST00000263897 ABCB6Q9NP58 842 aa17.24■□□□□ 0.35
USE1-201ENST00000263897 MYBPHLA2RUH7 354 aa17.23■□□□□ 0.35
USE1-201ENST00000263897 HEPACAM2A8MVW5 462 aa17.23■□□□□ 0.35
USE1-201ENST00000263897 PDXKO00764 312 aa17.23■□□□□ 0.35
USE1-201ENST00000263897 HCRTO43612 131 aa17.23■□□□□ 0.35
USE1-201ENST00000263897 FAM163BP0C2L3 166 aa17.23■□□□□ 0.35
USE1-201ENST00000263897 HMGA1P17096 107 aaKnown RBP17.23■□□□□ 0.35
USE1-201ENST00000263897 CD72P21854 359 aa17.23■□□□□ 0.35
USE1-201ENST00000263897 CYP2F1P24903 491 aa17.23■□□□□ 0.35
USE1-201ENST00000263897 LMO2P25791 158 aa17.23■□□□□ 0.35
USE1-201ENST00000263897 WEE1P30291 646 aa17.23■□□□□ 0.35
USE1-201ENST00000263897 CDC25CP30307 473 aa17.23■□□□□ 0.35
USE1-201ENST00000263897 GDI1P31150 447 aa17.23■□□□□ 0.35
USE1-201ENST00000263897 RPL10AP62906 217 aaKnown RBP17.23■□□□□ 0.35
USE1-201ENST00000263897 ANGPT1Q15389 498 aa17.23■□□□□ 0.35
USE1-201ENST00000263897 ARHGAP15Q53QZ3 475 aa17.23■□□□□ 0.35
USE1-201ENST00000263897 GPR158Q5T848 1215 aa17.23■□□□□ 0.35
USE1-201ENST00000263897 FAM171BQ6P995 826 aa17.23■□□□□ 0.35
USE1-201ENST00000263897 KRBA2Q6ZNG9 492 aa17.23■□□□□ 0.35
USE1-201ENST00000263897 PARD3BQ8TEW8 1205 aa17.23■□□□□ 0.35
USE1-201ENST00000263897 KBTBD7Q8WVZ9 684 aa17.23■□□□□ 0.35
USE1-201ENST00000263897 MMS19Q96T76 1030 aa17.23■□□□□ 0.35
USE1-201ENST00000263897 OSBPL6Q9BZF3 934 aa17.23■□□□□ 0.35
USE1-201ENST00000263897 GOLPH3LQ9H4A5 285 aa17.23■□□□□ 0.35
USE1-201ENST00000263897 TASP1Q9H6P5 420 aa17.23■□□□□ 0.35
USE1-201ENST00000263897 GDPD2Q9HCC8 539 aa17.23■□□□□ 0.35
USE1-201ENST00000263897 TRPV5Q9NQA5 729 aa17.23■□□□□ 0.35
USE1-201ENST00000263897 HEBP1Q9NRV9 189 aa17.23■□□□□ 0.35
USE1-201ENST00000263897 MTF2Q9Y483 593 aaPredicted RBP17.23■□□□□ 0.35
USE1-201ENST00000263897 FAM170BA6NMN3 283 aa17.22■□□□□ 0.35
USE1-201ENST00000263897 ATP2C2O75185 946 aa17.22■□□□□ 0.35
USE1-201ENST00000263897 LRRN2O75325 713 aa17.22■□□□□ 0.35
USE1-201ENST00000263897 RHOBTB3O94955 611 aa17.22■□□□□ 0.35
USE1-201ENST00000263897 ZNF202O95125 648 aa17.22■□□□□ 0.35
USE1-201ENST00000263897 PRR29P0C7W0 189 aa17.22■□□□□ 0.35
USE1-201ENST00000263897 GLULP15104 373 aa17.22■□□□□ 0.35
USE1-201ENST00000263897 WARSP23381 471 aaKnown RBP17.22■□□□□ 0.35
USE1-201ENST00000263897 DPYDQ12882 1025 aa17.22■□□□□ 0.35
USE1-201ENST00000263897 WDR72Q3MJ13 1102 aa17.22■□□□□ 0.35
USE1-201ENST00000263897 CFAP221Q4G0U5 840 aa17.22■□□□□ 0.35
USE1-201ENST00000263897 TPRG1Q6ZUI0 275 aa17.22■□□□□ 0.35
USE1-201ENST00000263897 SPATA2LQ8IUW3 424 aaPredicted RBP17.22■□□□□ 0.35
USE1-201ENST00000263897 GPIHBP1Q8IV16 184 aa17.22■□□□□ 0.35
USE1-201ENST00000263897 PLEKHO2Q8TD55 490 aa17.22■□□□□ 0.35
USE1-201ENST00000263897 CCDC47Q96A33 483 aaKnown RBP17.22■□□□□ 0.35
USE1-201ENST00000263897 RSPRY1Q96DX4 576 aa17.22■□□□□ 0.35
USE1-201ENST00000263897 LTB4R2Q9NPC1 389 aa17.22■□□□□ 0.35
USE1-201ENST00000263897 CDH9Q9ULB4 789 aa17.22■□□□□ 0.35
USE1-201ENST00000263897 RIF1Q5UIP0 2472 aaKnown RBP17.22■□□□□ 0.35
USE1-201ENST00000263897 NCANO14594 1321 aa17.21■□□□□ 0.35
USE1-201ENST00000263897 PTPRZ1P23471 2315 aaPredicted RBP17.21■□□□□ 0.35
USE1-201ENST00000263897 SHISA7A6NL88 538 aa17.21■□□□□ 0.35
USE1-201ENST00000263897 PROB1E7EW31 1015 aa17.21■□□□□ 0.35
USE1-201ENST00000263897 ZNF263O14978 683 aa17.21■□□□□ 0.35
USE1-201ENST00000263897 TACC1O75410 805 aa17.21■□□□□ 0.35
USE1-201ENST00000263897 STAU1O95793 577 aaKnown RBP17.21■□□□□ 0.35
USE1-201ENST00000263897 F11P03951 625 aa17.21■□□□□ 0.35
USE1-201ENST00000263897 PDGFRBP09619 1106 aa17.21■□□□□ 0.35
USE1-201ENST00000263897 CSH1P0DML2 217 aa17.21■□□□□ 0.35
USE1-201ENST00000263897 CSH2P0DML3 217 aa17.21■□□□□ 0.35
USE1-201ENST00000263897 GNL1P36915 607 aaPredicted RBP17.21■□□□□ 0.35
USE1-201ENST00000263897 NBL1P41271 181 aa17.21■□□□□ 0.35
USE1-201ENST00000263897 CASP4P49662 377 aa17.21■□□□□ 0.35
USE1-201ENST00000263897 GPR15P49685 360 aa17.21■□□□□ 0.35
USE1-201ENST00000263897 AP3M2P53677 418 aa17.21■□□□□ 0.35
USE1-201ENST00000263897 MYL6P60660 151 aa17.21■□□□□ 0.35
USE1-201ENST00000263897 CLDN10P78369 228 aa17.21■□□□□ 0.35
USE1-201ENST00000263897 TRPC3Q13507 836 aa17.21■□□□□ 0.35
USE1-201ENST00000263897 UBXN2BQ14CS0 331 aa17.21■□□□□ 0.35
USE1-201ENST00000263897 DDR2Q16832 855 aa17.21■□□□□ 0.35
USE1-201ENST00000263897 CCDC142Q17RM4 750 aa17.21■□□□□ 0.35
USE1-201ENST00000263897 SDHAF4Q5VUM1 108 aa17.21■□□□□ 0.35
USE1-201ENST00000263897 ZNF852Q6ZMS4 543 aa17.21■□□□□ 0.35
USE1-201ENST00000263897 TMEM150AQ86TG1 271 aa17.21■□□□□ 0.35
USE1-201ENST00000263897 FUBP3Q96I24 572 aaKnown RBP eCLIP17.21■□□□□ 0.35
USE1-201ENST00000263897 SYT15Q9BQS2 421 aa17.21■□□□□ 0.35
USE1-201ENST00000263897 SLC46A2Q9BY10 475 aa17.21■□□□□ 0.35
USE1-201ENST00000263897 OBP2AQ9NY56 170 aa17.21■□□□□ 0.35
USE1-201ENST00000263897 ZMYM5Q9UJ78 669 aa17.21■□□□□ 0.35
USE1-201ENST00000263897 MIA3Q5JRA6 1907 aa17.21■□□□□ 0.35
USE1-201ENST00000263897 DENND4CQ5VZ89 1909 aa17.21■□□□□ 0.35
USE1-201ENST00000263897 COL4A3Q01955 1670 aa17.2■□□□□ 0.34
USE1-201ENST00000263897 DPYSL4O14531 572 aa17.2■□□□□ 0.34
USE1-201ENST00000263897 PHACTR2O75167 634 aa17.2■□□□□ 0.34
USE1-201ENST00000263897 KIF20AO95235 890 aa17.2■□□□□ 0.34
USE1-201ENST00000263897 NR3C1P04150 777 aa17.2■□□□□ 0.34
USE1-201ENST00000263897 ATICP31939 592 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms