RNA–Protein interactions for RNA: ENST00000263202.14

UFD1-201, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFD1, Length 1,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-201ENST00000263202 PHF13Q86YI8 300 aaPredicted RBP24.07■■□□□ 1.44
UFD1-201ENST00000263202 MCOLN2Q8IZK6 566 aa24.07■■□□□ 1.44
UFD1-201ENST00000263202 B3GALNT2Q8NCR0 500 aa24.07■■□□□ 1.44
UFD1-201ENST00000263202 C1orf131Q8NDD1 294 aaKnown RBP24.07■■□□□ 1.44
UFD1-201ENST00000263202 ABHD8Q96I13 439 aa24.07■■□□□ 1.44
UFD1-201ENST00000263202 MARCH5Q9NX47 278 aa24.07■■□□□ 1.44
UFD1-201ENST00000263202 MYO1AQ9UBC5 1043 aa24.07■■□□□ 1.44
UFD1-201ENST00000263202 ADAM28Q9UKQ2 775 aa24.07■■□□□ 1.44
UFD1-201ENST00000263202 TSPAN16Q9UKR8 245 aa24.07■■□□□ 1.44
UFD1-201ENST00000263202 CEP83Q9Y592 693 aa24.07■■□□□ 1.44
UFD1-201ENST00000263202 NCANO14594 1321 aa24.07■■□□□ 1.44
UFD1-201ENST00000263202 A0A0A6YYK5 440 aaPredicted RBP24.06■■□□□ 1.44
UFD1-201ENST00000263202 ATP2C2O75185 946 aa24.06■■□□□ 1.44
UFD1-201ENST00000263202 TUBB4AP04350 444 aa24.06■■□□□ 1.44
UFD1-201ENST00000263202 TYMPP19971 482 aa24.06■■□□□ 1.44
UFD1-201ENST00000263202 GPC5P78333 572 aa24.06■■□□□ 1.44
UFD1-201ENST00000263202 ZNF569Q5MCW4 686 aa24.06■■□□□ 1.44
UFD1-201ENST00000263202 KIAA0319Q5VV43 1072 aa24.06■■□□□ 1.44
UFD1-201ENST00000263202 PPP1R2P3Q6NXS1 205 aa24.06■■□□□ 1.44
UFD1-201ENST00000263202 MON1BQ7L1V2 547 aa24.06■■□□□ 1.44
UFD1-201ENST00000263202 RNF10Q8N5U6 811 aaKnown RBP24.06■■□□□ 1.44
UFD1-201ENST00000263202 RTP3Q9BQQ7 232 aa24.06■■□□□ 1.44
UFD1-201ENST00000263202 M0QYV0 167 aa24.05■■□□□ 1.44
UFD1-201ENST00000263202 TRAPPC3O43617 180 aa24.05■■□□□ 1.44
UFD1-201ENST00000263202 MOCS3O95396 460 aa24.05■■□□□ 1.44
UFD1-201ENST00000263202 PTPN1P18031 435 aaKnown RBP24.05■■□□□ 1.44
UFD1-201ENST00000263202 BCAR1P56945 870 aa24.05■■□□□ 1.44
UFD1-201ENST00000263202 PSMC1P62191 440 aaKnown RBP24.05■■□□□ 1.44
UFD1-201ENST00000263202 GOLGA7BQ2TAP0 167 aa24.05■■□□□ 1.44
UFD1-201ENST00000263202 TMEM240Q5SV17 173 aa24.05■■□□□ 1.44
UFD1-201ENST00000263202 COL13A1Q5TAT6 717 aaPredicted RBP24.05■■□□□ 1.44
UFD1-201ENST00000263202 SYT10Q6XYQ8 523 aa24.05■■□□□ 1.44
UFD1-201ENST00000263202 WDR24Q96S15 920 aa24.05■■□□□ 1.44
UFD1-201ENST00000263202 BUB1O43683 1085 aa24.05■■□□□ 1.44
UFD1-201ENST00000263202 PBX3P40426 434 aa24.05■■□□□ 1.44
UFD1-201ENST00000263202 PTP4A2Q12974 167 aa24.05■■□□□ 1.44
UFD1-201ENST00000263202 DNTTIP2Q5QJE6 756 aaKnown RBP24.05■■□□□ 1.44
UFD1-201ENST00000263202 RFFLQ8WZ73 363 aa24.05■■□□□ 1.44
UFD1-201ENST00000263202 ZNF653Q96CK0 615 aa24.05■■□□□ 1.44
UFD1-201ENST00000263202 SYT15Q9BQS2 421 aa24.05■■□□□ 1.44
UFD1-201ENST00000263202 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.05■■□□□ 1.446e-7■■□□□ 13.8
UFD1-201ENST00000263202 CYTH4Q9UIA0 394 aa24.05■■□□□ 1.44
UFD1-201ENST00000263202 CDH9Q9ULB4 789 aa24.05■■□□□ 1.44
UFD1-201ENST00000263202 CAPN6Q9Y6Q1 641 aa24.05■■□□□ 1.44
UFD1-201ENST00000263202 KIAA1671Q9BY89 1806 aa24.04■■□□□ 1.44
UFD1-201ENST00000263202 ZBBXA8MT70 800 aa24.04■■□□□ 1.44
UFD1-201ENST00000263202 NT5C1B-RDH14C9J2C7 533 aa24.04■■□□□ 1.44
UFD1-201ENST00000263202 CCDC130P13994 396 aa24.04■■□□□ 1.44
UFD1-201ENST00000263202 MMP8P22894 467 aa24.04■■□□□ 1.44
UFD1-201ENST00000263202 GPD2P43304 727 aa24.04■■□□□ 1.44
UFD1-201ENST00000263202 PKDCCQ504Y2 493 aa24.04■■□□□ 1.44
UFD1-201ENST00000263202 OVOS1Q6IE37 1185 aa24.04■■□□□ 1.44
UFD1-201ENST00000263202 PSRC1Q6PGN9 363 aaPredicted RBP24.04■■□□□ 1.44
UFD1-201ENST00000263202 SLC35F6Q8N357 371 aa24.04■■□□□ 1.44
UFD1-201ENST00000263202 UBA3Q8TBC4 463 aa24.04■■□□□ 1.44
UFD1-201ENST00000263202 SLC35G2Q8TBE7 412 aa24.04■■□□□ 1.44
UFD1-201ENST00000263202 VCPIP1Q96JH7 1222 aa24.04■■□□□ 1.44
UFD1-201ENST00000263202 CRTAC1Q9NQ79 661 aa24.04■■□□□ 1.44
UFD1-201ENST00000263202 DNAI1Q9UI46 699 aa24.04■■□□□ 1.44
UFD1-201ENST00000263202 GTF3C4Q9UKN8 822 aa24.04■■□□□ 1.44
UFD1-201ENST00000263202 ZMYND8Q9ULU4 1186 aaPredicted RBP24.04■■□□□ 1.44
UFD1-201ENST00000263202 FANCGO15287 622 aa24.03■■□□□ 1.44
UFD1-201ENST00000263202 ATMINO43313 823 aaPredicted RBP24.03■■□□□ 1.44
UFD1-201ENST00000263202 CYP1A2P05177 515 aa24.03■■□□□ 1.44
UFD1-201ENST00000263202 PCSK1P29120 753 aa24.03■■□□□ 1.44
UFD1-201ENST00000263202 TKTP29401 623 aaKnown RBP24.03■■□□□ 1.44
UFD1-201ENST00000263202 C1QBPQ07021 282 aaKnown RBP24.03■■□□□ 1.44
UFD1-201ENST00000263202 CCDC142Q17RM4 750 aa24.03■■□□□ 1.44
UFD1-201ENST00000263202 TTC30AQ86WT1 665 aa24.03■■□□□ 1.44
UFD1-201ENST00000263202 CMTR2Q8IYT2 770 aaKnown RBP24.03■■□□□ 1.44
UFD1-201ENST00000263202 TRIM11Q96F44 468 aa24.03■■□□□ 1.44
UFD1-201ENST00000263202 NOX5Q96PH1 765 aa24.03■■□□□ 1.44
UFD1-201ENST00000263202 ACBD6Q9BR61 282 aa24.03■■□□□ 1.44
UFD1-201ENST00000263202 C11orf70Q9BRQ4 267 aa24.03■■□□□ 1.44
UFD1-201ENST00000263202 ADAM22Q9P0K1 906 aa24.03■■□□□ 1.44
UFD1-201ENST00000263202 MYBL1P10243 752 aa24.03■■□□□ 1.44
UFD1-201ENST00000263202 NAP1L1P55209 391 aaKnown RBP24.03■■□□□ 1.44
UFD1-201ENST00000263202 TCEAL1Q15170 157 aa24.03■■□□□ 1.44
UFD1-201ENST00000263202 C2CD6Q53TS8 623 aa24.03■■□□□ 1.44
UFD1-201ENST00000263202 MMS22LQ6ZRQ5 1243 aa24.03■■□□□ 1.44
UFD1-201ENST00000263202 TMEM173Q86WV6 379 aaPredicted RBP24.03■■□□□ 1.44
UFD1-201ENST00000263202 GPR62Q9BZJ7 368 aa24.03■■□□□ 1.44
UFD1-201ENST00000263202 OSGEPQ9NPF4 335 aa24.03■■□□□ 1.44
UFD1-201ENST00000263202 CNOT8Q9UFF9 292 aaKnown RBP24.03■■□□□ 1.44
UFD1-201ENST00000263202 SYN3O14994 580 aa24.02■■□□□ 1.44
UFD1-201ENST00000263202 NOP2P46087 812 aaKnown RBP24.02■■□□□ 1.44
UFD1-201ENST00000263202 ALDH7A1P49419 539 aaKnown RBP24.02■■□□□ 1.44
UFD1-201ENST00000263202 YWHAHQ04917 246 aaPredicted RBP24.02■■□□□ 1.44
UFD1-201ENST00000263202 MDH1BQ5I0G3 518 aa24.02■■□□□ 1.44
UFD1-201ENST00000263202 RHOT2Q8IXI1 618 aa24.02■■□□□ 1.44
UFD1-201ENST00000263202 THEM5Q8N1Q8 247 aa24.02■■□□□ 1.44
UFD1-201ENST00000263202 SLC2A14Q8TDB8 520 aa24.02■■□□□ 1.44
UFD1-201ENST00000263202 BCL7CQ8WUZ0 217 aaPredicted RBP24.02■■□□□ 1.44
UFD1-201ENST00000263202 CXXC1Q9P0U4 656 aaPredicted RBP24.02■■□□□ 1.44
UFD1-201ENST00000263202 HESX1Q9UBX0 185 aa24.02■■□□□ 1.44
UFD1-201ENST00000263202 SF3B1O75533 1304 aaKnown RBP eCLIP24.01■■□□□ 1.431e-6■■■■■ 75.7
UFD1-201ENST00000263202 RRM1P23921 792 aa24.01■■□□□ 1.43
UFD1-201ENST00000263202 ADORA2BP29275 332 aa24.01■■□□□ 1.43
UFD1-201ENST00000263202 BTG3Q14201 252 aaPredicted RBP24.01■■□□□ 1.43
UFD1-201ENST00000263202 FUT10Q6P4F1 479 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms