RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 CHURC1-FNTBB4DL54 471 aa13.15□□□□□ -0.3
TRAF4-202ENST00000262396 STX6O43752 255 aa13.15□□□□□ -0.3
TRAF4-202ENST00000262396 PRAMEF12O95522 483 aa13.15□□□□□ -0.3
TRAF4-202ENST00000262396 CKMP06732 381 aa13.15□□□□□ -0.3
TRAF4-202ENST00000262396 KCNA4P22459 653 aa13.15□□□□□ -0.3
TRAF4-202ENST00000262396 ACAT1P24752 427 aaKnown RBP13.15□□□□□ -0.3
TRAF4-202ENST00000262396 ANXA13P27216 316 aa13.15□□□□□ -0.3
TRAF4-202ENST00000262396 FNTBP49356 437 aa13.15□□□□□ -0.3
TRAF4-202ENST00000262396 TNK2Q07912 1038 aa13.15□□□□□ -0.3
TRAF4-202ENST00000262396 FZD5Q13467 585 aa13.15□□□□□ -0.3
TRAF4-202ENST00000262396 DDR2Q16832 855 aa13.15□□□□□ -0.3
TRAF4-202ENST00000262396 SDHAF4Q5VUM1 108 aa13.15□□□□□ -0.3
TRAF4-202ENST00000262396 FOXD4L5Q5VV16 416 aaPredicted RBP13.15□□□□□ -0.3
TRAF4-202ENST00000262396 LAIR1Q6GTX8 287 aa13.15□□□□□ -0.3
TRAF4-202ENST00000262396 CRELD2Q6UXH1 353 aaPredicted RBP13.15□□□□□ -0.3
TRAF4-202ENST00000262396 C4orf50Q6ZRC1 276 aa13.15□□□□□ -0.3
TRAF4-202ENST00000262396 LRRTM3Q86VH5 581 aa13.15□□□□□ -0.3
TRAF4-202ENST00000262396 FOXD4L4Q8WXT5 416 aaPredicted RBP13.15□□□□□ -0.3
TRAF4-202ENST00000262396 DHX58Q96C10 678 aa13.15□□□□□ -0.3
TRAF4-202ENST00000262396 DNAJC19Q96DA6 116 aa13.15□□□□□ -0.3
TRAF4-202ENST00000262396 INTS4Q96HW7 963 aaKnown RBP13.15□□□□□ -0.3
TRAF4-202ENST00000262396 FNBP1Q96RU3 617 aa13.15□□□□□ -0.3
TRAF4-202ENST00000262396 ACBD6Q9BR61 282 aa13.15□□□□□ -0.3
TRAF4-202ENST00000262396 CBWD1Q9BRT8 395 aa13.15□□□□□ -0.3
TRAF4-202ENST00000262396 SLC46A2Q9BY10 475 aa13.15□□□□□ -0.3
TRAF4-202ENST00000262396 MTMR12Q9C0I1 747 aa13.15□□□□□ -0.3
TRAF4-202ENST00000262396 KIF9Q9HAQ2 790 aa13.15□□□□□ -0.3
TRAF4-202ENST00000262396 PDE11AQ9HCR9 933 aa13.15□□□□□ -0.3
TRAF4-202ENST00000262396 TDP1Q9NUW8 608 aa13.15□□□□□ -0.3
TRAF4-202ENST00000262396 GTF3C4Q9UKN8 822 aa13.15□□□□□ -0.3
TRAF4-202ENST00000262396 SLC8A2Q9UPR5 921 aa13.15□□□□□ -0.3
TRAF4-202ENST00000262396 CACNA1IQ9P0X4 2223 aa13.15□□□□□ -0.31
TRAF4-202ENST00000262396 K7ELQ4 463 aaPredicted RBP13.14□□□□□ -0.31
TRAF4-202ENST00000262396 SPTLC2O15270 562 aa13.14□□□□□ -0.31
TRAF4-202ENST00000262396 LILRB5O75023 590 aa13.14□□□□□ -0.31
TRAF4-202ENST00000262396 ATG13O75143 517 aa13.14□□□□□ -0.31
TRAF4-202ENST00000262396 TNNI1P19237 187 aa13.14□□□□□ -0.31
TRAF4-202ENST00000262396 CYP2F1P24903 491 aa13.14□□□□□ -0.31
TRAF4-202ENST00000262396 CNR2P34972 360 aa13.14□□□□□ -0.31
TRAF4-202ENST00000262396 IFNAR2P48551 515 aa13.14□□□□□ -0.31
TRAF4-202ENST00000262396 CASP5P51878 434 aa13.14□□□□□ -0.31
TRAF4-202ENST00000262396 NLRP12P59046 1061 aa13.14□□□□□ -0.31
TRAF4-202ENST00000262396 SPEM2Q0P670 501 aa13.14□□□□□ -0.31
TRAF4-202ENST00000262396 PSMD2Q13200 908 aa13.14□□□□□ -0.31
TRAF4-202ENST00000262396 RUNX3Q13761 415 aa13.14□□□□□ -0.31
TRAF4-202ENST00000262396 DUOXA2Q1HG44 320 aa13.14□□□□□ -0.31
TRAF4-202ENST00000262396 INTS6LQ5JSJ4 861 aaKnown RBP13.14□□□□□ -0.31
TRAF4-202ENST00000262396 LMBRD2Q68DH5 695 aaPredicted RBP13.14□□□□□ -0.31
TRAF4-202ENST00000262396 TXNDC8Q6A555 127 aa13.14□□□□□ -0.31
TRAF4-202ENST00000262396 LONP2Q86WA8 852 aa13.14□□□□□ -0.31
TRAF4-202ENST00000262396 SYNPOQ8N3V7 929 aa13.14□□□□□ -0.31
TRAF4-202ENST00000262396 C1orf127Q8N9H9 656 aa13.14□□□□□ -0.31
TRAF4-202ENST00000262396 HPDLQ96IR7 371 aa13.14□□□□□ -0.31
TRAF4-202ENST00000262396 TNMDQ9H2S6 317 aa13.14□□□□□ -0.31
TRAF4-202ENST00000262396 SNX25Q9H3E2 840 aa13.14□□□□□ -0.31
TRAF4-202ENST00000262396 KIAA1586Q9HCI6 787 aa13.14□□□□□ -0.31
TRAF4-202ENST00000262396 MAGEC2Q9UBF1 373 aaPredicted RBP13.14□□□□□ -0.31
TRAF4-202ENST00000262396 L1RE1Q9UN81 338 aa13.14□□□□□ -0.31
TRAF4-202ENST00000262396 EP300Q09472 2414 aaPredicted RBP13.14□□□□□ -0.31
TRAF4-202ENST00000262396 DMDP11532 3685 aa13.14□□□□□ -0.31
TRAF4-202ENST00000262396 PDCD11Q14690 1871 aaKnown RBP13.14□□□□□ -0.31
TRAF4-202ENST00000262396 NCANO14594 1321 aa13.13□□□□□ -0.31
TRAF4-202ENST00000262396 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.13□□□□□ -0.31
TRAF4-202ENST00000262396 TRAV19A0A0A6YYK7 116 aa13.13□□□□□ -0.31
TRAF4-202ENST00000262396 ARNTLO00327 626 aa13.13□□□□□ -0.31
TRAF4-202ENST00000262396 PPP1R37O75864 691 aa13.13□□□□□ -0.31
TRAF4-202ENST00000262396 USP17L7P0C7H9 530 aa13.13□□□□□ -0.31
TRAF4-202ENST00000262396 CCDC192P0DO97 292 aa13.13□□□□□ -0.31
TRAF4-202ENST00000262396 DLATP10515 647 aaKnown RBP13.13□□□□□ -0.31
TRAF4-202ENST00000262396 WEE1P30291 646 aa13.13□□□□□ -0.31
TRAF4-202ENST00000262396 GRIK1P39086 918 aa13.13□□□□□ -0.31
TRAF4-202ENST00000262396 GPR15P49685 360 aa13.13□□□□□ -0.31
TRAF4-202ENST00000262396 CYP27A1Q02318 531 aa13.13□□□□□ -0.31
TRAF4-202ENST00000262396 NR1H3Q13133 447 aa13.13□□□□□ -0.31
TRAF4-202ENST00000262396 TRPC3Q13507 836 aa13.13□□□□□ -0.31
TRAF4-202ENST00000262396 KCNB1Q14721 858 aa13.13□□□□□ -0.31
TRAF4-202ENST00000262396 PDGFRLQ15198 375 aa13.13□□□□□ -0.31
TRAF4-202ENST00000262396 MAPRE1Q15691 268 aaKnown RBP13.13□□□□□ -0.31
TRAF4-202ENST00000262396 FOXD4L6Q3SYB3 417 aaPredicted RBP13.13□□□□□ -0.31
TRAF4-202ENST00000262396 TXNDC11Q6PKC3 985 aa13.13□□□□□ -0.31
TRAF4-202ENST00000262396 FOXD4L3Q6VB84 417 aaPredicted RBP13.13□□□□□ -0.31
TRAF4-202ENST00000262396 MAMSTRQ6ZN01 415 aa13.13□□□□□ -0.31
TRAF4-202ENST00000262396 Q6ZS52 159 aa13.13□□□□□ -0.31
TRAF4-202ENST00000262396 CPA6Q8N4T0 437 aa13.13□□□□□ -0.31
TRAF4-202ENST00000262396 TOP6BLQ8N6T0 577 aa13.13□□□□□ -0.31
TRAF4-202ENST00000262396 IQUBQ8NA54 791 aa13.13□□□□□ -0.31
TRAF4-202ENST00000262396 RDH13Q8NBN7 331 aa13.13□□□□□ -0.31
TRAF4-202ENST00000262396 STKLD1Q8NE28 680 aa13.13□□□□□ -0.31
TRAF4-202ENST00000262396 MKNK1Q9BUB5 465 aa13.13□□□□□ -0.31
TRAF4-202ENST00000262396 CUEDC2Q9H467 287 aa13.13□□□□□ -0.31
TRAF4-202ENST00000262396 EBF3Q9H4W6 596 aa13.13□□□□□ -0.31
TRAF4-202ENST00000262396 ABCB6Q9NP58 842 aa13.13□□□□□ -0.31
TRAF4-202ENST00000262396 TMLHEQ9NVH6 421 aa13.13□□□□□ -0.31
TRAF4-202ENST00000262396 FAM13BQ9NYF5 915 aa13.13□□□□□ -0.31
TRAF4-202ENST00000262396 EHD2Q9NZN4 543 aa13.13□□□□□ -0.31
TRAF4-202ENST00000262396 TFIP11Q9UBB9 837 aaKnown RBP13.13□□□□□ -0.31
TRAF4-202ENST00000262396 MTMR6Q9Y217 621 aa13.13□□□□□ -0.31
TRAF4-202ENST00000262396 SHISA7A6NL88 538 aa13.12□□□□□ -0.31
TRAF4-202ENST00000262396 PHACTR2O75167 634 aa13.12□□□□□ -0.31
TRAF4-202ENST00000262396 ABL1P00519 1130 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms