RNA–Protein interactions for RNA: ENST00000259605.10

RNF38-201, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 5,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-201ENST00000259605 CORO1BQ9BR76 489 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 TBCDQ9BTW9 1192 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 SLC2A4RGQ9NR83 387 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 PAPOLBQ9NRJ5 636 aaKnown RBP4.22□□□□□ -1.73
RNF38-201ENST00000259605 KRT82Q9NSB4 513 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 FAM207AQ9NSI2 230 aaPredicted RBP4.22□□□□□ -1.73
RNF38-201ENST00000259605 PSME2Q9UL46 239 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 SLC12A8A0AV02 714 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 SOWAHDA6NJG2 315 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 GOLGA8RI6L899 631 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 CLEC3AO75596 197 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 KRT37O76014 449 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 CCNDBP1O95273 360 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 INHAP05111 366 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 AKT2P31751 481 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 CHRNA3P32297 505 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 PSEN1P49768 467 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 BCAR1P56945 870 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 C1QTNF8P60827 252 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 BDH1Q02338 343 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 GRM3Q14832 879 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 WDR72Q3MJ13 1102 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 FASTKD1Q53R41 847 aaKnown RBP4.22□□□□□ -1.73
RNF38-201ENST00000259605 METTL7BQ6UX53 244 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 VASH1Q7L8A9 365 aaPredicted RBP4.22□□□□□ -1.73
RNF38-201ENST00000259605 CFAP61Q8NHU2 1237 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 HERVK_113Q902F9 699 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 DDX1Q92499 740 aaKnown RBP4.22□□□□□ -1.73
RNF38-201ENST00000259605 ZNF512BQ96KM6 892 aaPredicted RBP4.22□□□□□ -1.73
RNF38-201ENST00000259605 ZDHHC15Q96MV8 337 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 FAM161BQ96MY7 647 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 QRFPRQ96P65 431 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 TGS1Q96RS0 853 aaKnown RBP4.22□□□□□ -1.73
RNF38-201ENST00000259605 LXNQ9BS40 222 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 C2orf49Q9BVC5 232 aaPredicted RBP4.22□□□□□ -1.73
RNF38-201ENST00000259605 BRINP2Q9C0B6 783 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 USP44Q9H0E7 712 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 DHX35Q9H5Z1 703 aaKnown RBP4.22□□□□□ -1.73
RNF38-201ENST00000259605 KLHL28Q9NXS3 571 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 ARL15Q9NXU5 204 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 DDX20Q9UHI6 824 aaKnown RBP4.22□□□□□ -1.73
RNF38-201ENST00000259605 MAPK8IP1Q9UQF2 711 aa4.22□□□□□ -1.73
RNF38-201ENST00000259605 ABHD14A-ACY1A0A1B0GW23 586 aa4.21□□□□□ -1.73
RNF38-201ENST00000259605 TBX3O15119 743 aa4.21□□□□□ -1.73
RNF38-201ENST00000259605 SLC16A4O15374 487 aa4.21□□□□□ -1.73
RNF38-201ENST00000259605 KERAO60938 352 aa4.21□□□□□ -1.73
RNF38-201ENST00000259605 LCP1P13796 627 aa4.21□□□□□ -1.73
RNF38-201ENST00000259605 IL1R1P14778 569 aa4.21□□□□□ -1.73
RNF38-201ENST00000259605 PSMA4P25789 261 aaKnown RBP4.21□□□□□ -1.73
RNF38-201ENST00000259605 YWHABP31946 246 aaKnown RBP4.21□□□□□ -1.73
RNF38-201ENST00000259605 GPC1P35052 558 aa4.21□□□□□ -1.73
RNF38-201ENST00000259605 GPD2P43304 727 aa4.21□□□□□ -1.73
RNF38-201ENST00000259605 FKBP1AP62942 108 aaKnown RBP4.21□□□□□ -1.73
RNF38-201ENST00000259605 PTK6Q13882 451 aa4.21□□□□□ -1.73
RNF38-201ENST00000259605 ANKRD20A4Q4UJ75 823 aa4.21□□□□□ -1.73
RNF38-201ENST00000259605 FAM102AQ5T9C2 384 aaPredicted RBP4.21□□□□□ -1.73
RNF38-201ENST00000259605 ANKRD20A1Q5TYW2 823 aa4.21□□□□□ -1.73
RNF38-201ENST00000259605 ARL6IP4Q66PJ3 421 aaKnown RBP4.21□□□□□ -1.73
RNF38-201ENST00000259605 CDC42EP5Q6NZY7 148 aa4.21□□□□□ -1.73
RNF38-201ENST00000259605 TBC1D1Q86TI0 1168 aaPredicted RBP4.21□□□□□ -1.73
RNF38-201ENST00000259605 ACOT1Q86TX2 421 aa4.21□□□□□ -1.73
RNF38-201ENST00000259605 RHOT2Q8IXI1 618 aa4.21□□□□□ -1.73
RNF38-201ENST00000259605 MOCOSQ96EN8 888 aa4.21□□□□□ -1.73
RNF38-201ENST00000259605 C1QTNF1Q9BXJ1 281 aa4.21□□□□□ -1.73
RNF38-201ENST00000259605 TM6SF1Q9BZW5 370 aa4.21□□□□□ -1.73
RNF38-201ENST00000259605 ASCC2Q9H1I8 757 aaPredicted RBP4.21□□□□□ -1.73
RNF38-201ENST00000259605 DCCP43146 1447 aa4.21□□□□□ -1.73
RNF38-201ENST00000259605 MAST1Q9Y2H9 1570 aa4.21□□□□□ -1.74
RNF38-201ENST00000259605 hCG_1642624A0A1W2PR95 340 aa4.21□□□□□ -1.74
RNF38-201ENST00000259605 TLR2O60603 784 aa4.21□□□□□ -1.74
RNF38-201ENST00000259605 NDUFB10O96000 172 aa4.21□□□□□ -1.74
RNF38-201ENST00000259605 ALPPP05187 535 aa4.21□□□□□ -1.74
RNF38-201ENST00000259605 ICAM1P05362 532 aa4.21□□□□□ -1.74
RNF38-201ENST00000259605 KLK3P07288 261 aaPredicted RBP4.21□□□□□ -1.74
RNF38-201ENST00000259605 SRGNP10124 158 aa4.21□□□□□ -1.74
RNF38-201ENST00000259605 GYS1P13807 737 aa4.21□□□□□ -1.74
RNF38-201ENST00000259605 SP100P23497 879 aaPredicted RBP4.21□□□□□ -1.74
RNF38-201ENST00000259605 STX2P32856 288 aa4.21□□□□□ -1.74
RNF38-201ENST00000259605 MASP1P48740 699 aa4.21□□□□□ -1.74
RNF38-201ENST00000259605 PER3P56645 1201 aa4.21□□□□□ -1.74
RNF38-201ENST00000259605 POLR2FP61218 127 aaKnown RBP4.21□□□□□ -1.74
RNF38-201ENST00000259605 ILF3Q12906 894 aaKnown RBP eCLIP4.21□□□□□ -1.74
RNF38-201ENST00000259605 MESDQ14696 234 aa4.21□□□□□ -1.74
RNF38-201ENST00000259605 UBE2SQ16763 222 aa4.21□□□□□ -1.74
RNF38-201ENST00000259605 SETMARQ53H47 684 aaPredicted RBP4.21□□□□□ -1.74
RNF38-201ENST00000259605 MIIPQ5JXC2 388 aa4.21□□□□□ -1.74
RNF38-201ENST00000259605 GJC2Q5T442 439 aaPredicted RBP4.21□□□□□ -1.74
RNF38-201ENST00000259605 MTHFD1LQ6UB35 978 aa4.21□□□□□ -1.74
RNF38-201ENST00000259605 TMEM270Q6UE05 265 aa4.21□□□□□ -1.74
RNF38-201ENST00000259605 RBM23Q86U06 439 aaKnown RBP4.21□□□□□ -1.74
RNF38-201ENST00000259605 TEX9Q8N6V9 391 aa4.21□□□□□ -1.74
RNF38-201ENST00000259605 IRF7Q92985 503 aa4.21□□□□□ -1.74
RNF38-201ENST00000259605 RERGQ96A58 199 aaPredicted RBP4.21□□□□□ -1.74
RNF38-201ENST00000259605 TMEM159Q96B96 161 aa4.21□□□□□ -1.74
RNF38-201ENST00000259605 PHACTR3Q96KR7 559 aa4.21□□□□□ -1.74
RNF38-201ENST00000259605 SENP7Q9BQF6 1050 aa4.21□□□□□ -1.74
RNF38-201ENST00000259605 CNPY3Q9BT09 278 aa4.21□□□□□ -1.74
RNF38-201ENST00000259605 ADI1Q9BV57 179 aa4.21□□□□□ -1.74
RNF38-201ENST00000259605 SLC13A1Q9BZW2 595 aa4.21□□□□□ -1.74
RNF38-201ENST00000259605 ELOVL4Q9GZR5 314 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms