RNA–Protein interactions for RNA: ENST00000259254.8

GYPC-201, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GYPC, Length 1,246 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-201ENST00000259254 B3GALNT2Q8NCR0 500 aa16.58■□□□□ 0.24
GYPC-201ENST00000259254 RIN2Q8WYP3 895 aaPredicted RBP16.58■□□□□ 0.24
GYPC-201ENST00000259254 LPIN3Q9BQK8 851 aa16.58■□□□□ 0.24
GYPC-201ENST00000259254 HERC2P3Q9BVR0 1158 aa16.58■□□□□ 0.24
GYPC-201ENST00000259254 CDH9Q9ULB4 789 aa16.58■□□□□ 0.24
GYPC-201ENST00000259254 MTUS1Q9ULD2 1270 aa16.58■□□□□ 0.24
GYPC-201ENST00000259254 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.58■□□□□ 0.24
GYPC-201ENST00000259254 UNC80Q8N2C7 3258 aa16.58■□□□□ 0.24
GYPC-201ENST00000259254 DLL1O00548 723 aa16.57■□□□□ 0.24
GYPC-201ENST00000259254 C2CD2LO14523 706 aa16.57■□□□□ 0.24
GYPC-201ENST00000259254 ATP2C2O75185 946 aa16.57■□□□□ 0.24
GYPC-201ENST00000259254 IPO7O95373 1038 aaKnown RBP16.57■□□□□ 0.24
GYPC-201ENST00000259254 SOD2P04179 222 aa16.57■□□□□ 0.24
GYPC-201ENST00000259254 URODP06132 367 aa16.57■□□□□ 0.24
GYPC-201ENST00000259254 MMEP08473 750 aa16.57■□□□□ 0.24
GYPC-201ENST00000259254 PTPN1P18031 435 aaKnown RBP16.57■□□□□ 0.24
GYPC-201ENST00000259254 ANXA13P27216 316 aa16.57■□□□□ 0.24
GYPC-201ENST00000259254 CA8P35219 290 aa16.57■□□□□ 0.24
GYPC-201ENST00000259254 GLUD2P49448 558 aa16.57■□□□□ 0.24
GYPC-201ENST00000259254 KIF11P52732 1056 aa16.57■□□□□ 0.24
GYPC-201ENST00000259254 MAPK8IP2Q13387 824 aaPredicted RBP16.57■□□□□ 0.24
GYPC-201ENST00000259254 MTF1Q14872 753 aa16.57■□□□□ 0.24
GYPC-201ENST00000259254 MDH1BQ5I0G3 518 aa16.57■□□□□ 0.24
GYPC-201ENST00000259254 RAD9BQ6WBX8 426 aa16.57■□□□□ 0.24
GYPC-201ENST00000259254 ANKS3Q6ZW76 656 aa16.57■□□□□ 0.24
GYPC-201ENST00000259254 DDX53Q86TM3 631 aaKnown RBP16.57■□□□□ 0.24
GYPC-201ENST00000259254 GLYCTKQ8IVS8 523 aa16.57■□□□□ 0.24
GYPC-201ENST00000259254 CCDC170Q8IYT3 715 aa16.57■□□□□ 0.24
GYPC-201ENST00000259254 CRYBG2Q8N1P7 616 aa16.57■□□□□ 0.24
GYPC-201ENST00000259254 KLHL23Q8NBE8 558 aa16.57■□□□□ 0.24
GYPC-201ENST00000259254 ZNF606Q8WXB4 792 aa16.57■□□□□ 0.24
GYPC-201ENST00000259254 TFAP2BQ92481 460 aa16.57■□□□□ 0.24
GYPC-201ENST00000259254 RTP3Q9BQQ7 232 aa16.57■□□□□ 0.24
GYPC-201ENST00000259254 ACBD6Q9BR61 282 aa16.57■□□□□ 0.24
GYPC-201ENST00000259254 C17orf80Q9BSJ5 609 aa16.57■□□□□ 0.24
GYPC-201ENST00000259254 MED10Q9BTT4 135 aa16.57■□□□□ 0.24
GYPC-201ENST00000259254 VN1R3Q9BXE9 311 aa16.57■□□□□ 0.24
GYPC-201ENST00000259254 SPTLC3Q9NUV7 552 aa16.57■□□□□ 0.24
GYPC-201ENST00000259254 ADAMTS1Q9UHI8 967 aa16.57■□□□□ 0.24
GYPC-201ENST00000259254 CHD7Q9P2D1 2997 aa16.57■□□□□ 0.24
GYPC-201ENST00000259254 TDRD15B5MCY1 1934 aaKnown RBP16.57■□□□□ 0.24
GYPC-201ENST00000259254 FAM170AA1A519 330 aa16.56■□□□□ 0.24
GYPC-201ENST00000259254 OR6C75A6NL08 312 aa16.56■□□□□ 0.24
GYPC-201ENST00000259254 OAZ2O95190 189 aa16.56■□□□□ 0.24
GYPC-201ENST00000259254 LINC00271P0C7V0 271 aa16.56■□□□□ 0.24
GYPC-201ENST00000259254 CHRNB2P17787 502 aa16.56■□□□□ 0.24
GYPC-201ENST00000259254 IGFBP4P22692 258 aa16.56■□□□□ 0.24
GYPC-201ENST00000259254 ADORA2BP29275 332 aa16.56■□□□□ 0.24
GYPC-201ENST00000259254 ARPP19P56211 112 aa16.56■□□□□ 0.24
GYPC-201ENST00000259254 GFPT1Q06210 699 aaPredicted RBP16.56■□□□□ 0.24
GYPC-201ENST00000259254 SPA17Q15506 151 aa16.56■□□□□ 0.24
GYPC-201ENST00000259254 GOLGA7BQ2TAP0 167 aa16.56■□□□□ 0.24
GYPC-201ENST00000259254 INTS6LQ5JSJ4 861 aaKnown RBP16.56■□□□□ 0.24
GYPC-201ENST00000259254 PRSS55Q6UWB4 352 aaPredicted RBP16.56■□□□□ 0.24
GYPC-201ENST00000259254 PASD1Q8IV76 773 aa16.56■□□□□ 0.24
GYPC-201ENST00000259254 VPS52Q8N1B4 723 aa16.56■□□□□ 0.24
GYPC-201ENST00000259254 C12orf29Q8N999 325 aa16.56■□□□□ 0.24
GYPC-201ENST00000259254 OR10T2Q8NGX3 314 aa16.56■□□□□ 0.24
GYPC-201ENST00000259254 HESX1Q9UBX0 185 aa16.56■□□□□ 0.24
GYPC-201ENST00000259254 STK39Q9UEW8 545 aa16.56■□□□□ 0.24
GYPC-201ENST00000259254 CEP83Q9Y592 693 aa16.56■□□□□ 0.24
GYPC-201ENST00000259254 EPN1Q9Y6I3 576 aaPredicted RBP16.56■□□□□ 0.24
GYPC-201ENST00000259254 TRIP11Q15643 1979 aa16.55■□□□□ 0.24
GYPC-201ENST00000259254 FNDC1Q4ZHG4 1894 aaPredicted RBP16.55■□□□□ 0.24
GYPC-201ENST00000259254 NLRC5Q86WI3 1866 aa16.55■□□□□ 0.24
GYPC-201ENST00000259254 MYBPHLA2RUH7 354 aa16.55■□□□□ 0.24
GYPC-201ENST00000259254 M0QYV0 167 aa16.55■□□□□ 0.24
GYPC-201ENST00000259254 O00370 1275 aa16.55■□□□□ 0.24
GYPC-201ENST00000259254 DDX3XO00571 662 aaKnown RBP eCLIP16.55■□□□□ 0.243e-15■■■■□ 24
GYPC-201ENST00000259254 CSPG5O95196 566 aa16.55■□□□□ 0.24
GYPC-201ENST00000259254 NDUFA10O95299 355 aa16.55■□□□□ 0.24
GYPC-201ENST00000259254 CCDC130P13994 396 aa16.55■□□□□ 0.24
GYPC-201ENST00000259254 CDR1P51861 262 aa16.55■□□□□ 0.24
GYPC-201ENST00000259254 FMO1Q01740 532 aa16.55■□□□□ 0.24
GYPC-201ENST00000259254 PLCB3Q01970 1234 aa16.55■□□□□ 0.24
GYPC-201ENST00000259254 CYP27A1Q02318 531 aa16.55■□□□□ 0.24
GYPC-201ENST00000259254 BMS1Q14692 1282 aaKnown RBP16.55■□□□□ 0.24
GYPC-201ENST00000259254 STILQ15468 1287 aa16.55■□□□□ 0.24
GYPC-201ENST00000259254 PSMD5Q16401 504 aa16.55■□□□□ 0.24
GYPC-201ENST00000259254 CCDC142Q17RM4 750 aa16.55■□□□□ 0.24
GYPC-201ENST00000259254 HS1BP3Q53T59 392 aa16.55■□□□□ 0.24
GYPC-201ENST00000259254 KIAA0319Q5VV43 1072 aa16.55■□□□□ 0.24
GYPC-201ENST00000259254 RNF168Q8IYW5 571 aaPredicted RBP16.55■□□□□ 0.24
GYPC-201ENST00000259254 DCP1BQ8IZD4 617 aaKnown RBP16.55■□□□□ 0.24
GYPC-201ENST00000259254 LNX1Q8TBB1 728 aaPredicted RBP16.55■□□□□ 0.24
GYPC-201ENST00000259254 SLC2A14Q8TDB8 520 aa16.55■□□□□ 0.24
GYPC-201ENST00000259254 DDX1Q92499 740 aaKnown RBP16.55■□□□□ 0.24
GYPC-201ENST00000259254 CYFIP2Q96F07 1278 aa16.55■□□□□ 0.24
GYPC-201ENST00000259254 SAMD11Q96NU1 681 aa16.55■□□□□ 0.24
GYPC-201ENST00000259254 TGS1Q96RS0 853 aaKnown RBP16.55■□□□□ 0.24
GYPC-201ENST00000259254 TMEM209Q96SK2 561 aa16.55■□□□□ 0.24
GYPC-201ENST00000259254 ZSWIM1Q9BR11 485 aa16.55■□□□□ 0.24
GYPC-201ENST00000259254 PLVAPQ9BX97 442 aa16.55■□□□□ 0.24
GYPC-201ENST00000259254 CERS4Q9HA82 394 aa16.55■□□□□ 0.24
GYPC-201ENST00000259254 CRTAC1Q9NQ79 661 aa16.55■□□□□ 0.24
GYPC-201ENST00000259254 GTF3C4Q9UKN8 822 aa16.55■□□□□ 0.24
GYPC-201ENST00000259254 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.55■□□□□ 0.245e-6■■□□□ 11.8
GYPC-201ENST00000259254 A0A087X0T9 212 aa16.54■□□□□ 0.24
GYPC-201ENST00000259254 EPOPA6NHQ4 379 aa16.54■□□□□ 0.24
GYPC-201ENST00000259254 TMCO5BA8MYB1 307 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms