RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 FNDC1Q4ZHG4 1894 aaPredicted RBP18.56■□□□□ 0.56
SRSF1-201ENST00000258962 THAP12O43422 761 aa18.56■□□□□ 0.56
SRSF1-201ENST00000258962 NCK2O43639 380 aa18.56■□□□□ 0.56
SRSF1-201ENST00000258962 NOP2P46087 812 aaKnown RBP18.56■□□□□ 0.56
SRSF1-201ENST00000258962 TCEAL1Q15170 157 aa18.56■□□□□ 0.56
SRSF1-201ENST00000258962 CCDC85BQ15834 202 aaPredicted RBP18.56■□□□□ 0.56
SRSF1-201ENST00000258962 ZNF394Q53GI3 561 aa18.56■□□□□ 0.56
SRSF1-201ENST00000258962 SLC35G2Q8TBE7 412 aa18.56■□□□□ 0.56
SRSF1-201ENST00000258962 WHAMMQ8TF30 809 aa18.56■□□□□ 0.56
SRSF1-201ENST00000258962 ZNF558Q96NG5 402 aa18.56■□□□□ 0.56
SRSF1-201ENST00000258962 TSPAN18Q96SJ8 248 aa18.56■□□□□ 0.56
SRSF1-201ENST00000258962 CWH43Q9H720 699 aa18.56■□□□□ 0.56
SRSF1-201ENST00000258962 CYP3A43Q9HB55 503 aa18.56■□□□□ 0.56
SRSF1-201ENST00000258962 COG5Q9UP83 839 aa18.56■□□□□ 0.56
SRSF1-201ENST00000258962 PTGESO14684 152 aa18.55■□□□□ 0.56
SRSF1-201ENST00000258962 FTCDO95954 541 aa18.55■□□□□ 0.56
SRSF1-201ENST00000258962 ALDH7A1P49419 539 aaKnown RBP18.55■□□□□ 0.56
SRSF1-201ENST00000258962 SOX4Q06945 474 aaPredicted RBP18.55■□□□□ 0.56
SRSF1-201ENST00000258962 IFI16Q16666 785 aaKnown RBP18.55■□□□□ 0.56
SRSF1-201ENST00000258962 C9orf57Q5W0N0 161 aa18.55■□□□□ 0.56
SRSF1-201ENST00000258962 KLHL23Q8NBE8 558 aa18.55■□□□□ 0.56
SRSF1-201ENST00000258962 COLGALT1Q8NBJ5 622 aa18.55■□□□□ 0.56
SRSF1-201ENST00000258962 ZNF606Q8WXB4 792 aa18.55■□□□□ 0.56
SRSF1-201ENST00000258962 MRPL38Q96DV4 380 aaKnown RBP18.55■□□□□ 0.56
SRSF1-201ENST00000258962 FAM193BQ96PV7 902 aaPredicted RBP18.55■□□□□ 0.56
SRSF1-201ENST00000258962 TLR10Q9BXR5 811 aa18.55■□□□□ 0.56
SRSF1-201ENST00000258962 ALG13Q9NP73 1137 aaKnown RBP18.55■□□□□ 0.56
SRSF1-201ENST00000258962 HCSTQ9UBK5 93 aa18.55■□□□□ 0.56
SRSF1-201ENST00000258962 HMGXB4Q9UGU5 601 aa18.55■□□□□ 0.56
SRSF1-201ENST00000258962 SNX12Q9UMY4 172 aa18.55■□□□□ 0.56
SRSF1-201ENST00000258962 GIT1Q9Y2X7 761 aa18.55■□□□□ 0.56
SRSF1-201ENST00000258962 SAR1BQ9Y6B6 198 aa18.55■□□□□ 0.56
SRSF1-201ENST00000258962 PRRC2BQ5JSZ5 2229 aaKnown RBP18.55■□□□□ 0.56
SRSF1-201ENST00000258962 CARNS1A5YM72 827 aa18.54■□□□□ 0.56
SRSF1-201ENST00000258962 SRGAP2O75044 1071 aa18.54■□□□□ 0.56
SRSF1-201ENST00000258962 P4HA1P13674 534 aa18.54■□□□□ 0.56
SRSF1-201ENST00000258962 BRD2P25440 801 aaKnown RBP18.54■□□□□ 0.56
SRSF1-201ENST00000258962 SSTR3P32745 418 aaPredicted RBP18.54■□□□□ 0.56
SRSF1-201ENST00000258962 RAD23BP54727 409 aa18.54■□□□□ 0.56
SRSF1-201ENST00000258962 NOMO3P69849 1222 aa18.54■□□□□ 0.56
SRSF1-201ENST00000258962 GPC5P78333 572 aa18.54■□□□□ 0.56
SRSF1-201ENST00000258962 CENPCQ03188 943 aa18.54■□□□□ 0.56
SRSF1-201ENST00000258962 NAA35Q5VZE5 725 aa18.54■□□□□ 0.56
SRSF1-201ENST00000258962 KCNT2Q6UVM3 1135 aa18.54■□□□□ 0.56
SRSF1-201ENST00000258962 TRIM72Q6ZMU5 477 aa18.54■□□□□ 0.56
SRSF1-201ENST00000258962 SLFN11Q7Z7L1 901 aa18.54■□□□□ 0.56
SRSF1-201ENST00000258962 LRRC52Q8N7C0 313 aa18.54■□□□□ 0.56
SRSF1-201ENST00000258962 TFAP2BQ92481 460 aa18.54■□□□□ 0.56
SRSF1-201ENST00000258962 TSC1Q92574 1164 aa18.54■□□□□ 0.56
SRSF1-201ENST00000258962 CYFIP2Q96F07 1278 aa18.54■□□□□ 0.56
SRSF1-201ENST00000258962 ZFP42Q96MM3 310 aa18.54■□□□□ 0.56
SRSF1-201ENST00000258962 TWNKQ96RR1 684 aa18.54■□□□□ 0.56
SRSF1-201ENST00000258962 LMAN2LQ9H0V9 348 aa18.54■□□□□ 0.56
SRSF1-201ENST00000258962 GOLPH3Q9H4A6 298 aa18.54■□□□□ 0.56
SRSF1-201ENST00000258962 TBC1D13Q9NVG8 400 aa18.54■□□□□ 0.56
SRSF1-201ENST00000258962 CHD7Q9P2D1 2997 aa18.54■□□□□ 0.56
SRSF1-201ENST00000258962 ARL5CA6NH57 179 aa18.54■□□□□ 0.56
SRSF1-201ENST00000258962 PIRO00625 290 aa18.54■□□□□ 0.56
SRSF1-201ENST00000258962 GRM6O15303 877 aa18.54■□□□□ 0.56
SRSF1-201ENST00000258962 ATMINO43313 823 aaPredicted RBP18.54■□□□□ 0.56
SRSF1-201ENST00000258962 CILPO75339 1184 aa18.54■□□□□ 0.56
SRSF1-201ENST00000258962 CYP1A2P05177 515 aa18.54■□□□□ 0.56
SRSF1-201ENST00000258962 PPM1AP35813 382 aa18.54■□□□□ 0.56
SRSF1-201ENST00000258962 HADHBP55084 474 aaKnown RBP18.54■□□□□ 0.56
SRSF1-201ENST00000258962 TNNC1P63316 161 aa18.54■□□□□ 0.56
SRSF1-201ENST00000258962 INCA1Q0VD86 236 aa18.54■□□□□ 0.56
SRSF1-201ENST00000258962 WHAMMP3Q1A5X7 153 aa18.54■□□□□ 0.56
SRSF1-201ENST00000258962 MEI1Q5TIA1 1274 aa18.54■□□□□ 0.56
SRSF1-201ENST00000258962 PASD1Q8IV76 773 aa18.54■□□□□ 0.56
SRSF1-201ENST00000258962 RHOT2Q8IXI1 618 aa18.54■□□□□ 0.56
SRSF1-201ENST00000258962 CPA5Q8WXQ8 436 aa18.54■□□□□ 0.56
SRSF1-201ENST00000258962 GAD1Q99259 594 aa18.54■□□□□ 0.56
SRSF1-201ENST00000258962 ELOVL4Q9GZR5 314 aa18.54■□□□□ 0.56
SRSF1-201ENST00000258962 GOLGA2P5Q9HBQ8 144 aa18.54■□□□□ 0.56
SRSF1-201ENST00000258962 SPG21Q9NZD8 308 aa18.54■□□□□ 0.56
SRSF1-201ENST00000258962 PUF60Q9UHX1 559 aaKnown RBP18.54■□□□□ 0.56
SRSF1-201ENST00000258962 GTF3C4Q9UKN8 822 aa18.54■□□□□ 0.56
SRSF1-201ENST00000258962 TDRD15B5MCY1 1934 aaKnown RBP18.53■□□□□ 0.56
SRSF1-201ENST00000258962 NLRC5Q86WI3 1866 aa18.53■□□□□ 0.56
SRSF1-201ENST00000258962 XPOTO43592 962 aaKnown RBP18.53■□□□□ 0.56
SRSF1-201ENST00000258962 BUB1BO60566 1050 aaPredicted RBP18.53■□□□□ 0.56
SRSF1-201ENST00000258962 FGF18O76093 207 aa18.53■□□□□ 0.56
SRSF1-201ENST00000258962 POMCP01189 267 aa18.53■□□□□ 0.56
SRSF1-201ENST00000258962 ITGB1P05556 798 aa18.53■□□□□ 0.56
SRSF1-201ENST00000258962 CYP3A5P20815 502 aa18.53■□□□□ 0.56
SRSF1-201ENST00000258962 MLH1P40692 756 aa18.53■□□□□ 0.56
SRSF1-201ENST00000258962 BCAR1P56945 870 aa18.53■□□□□ 0.56
SRSF1-201ENST00000258962 TUBB4BP68371 445 aa18.53■□□□□ 0.56
SRSF1-201ENST00000258962 KRT17Q04695 432 aa18.53■□□□□ 0.56
SRSF1-201ENST00000258962 MYO1EQ12965 1108 aa18.53■□□□□ 0.56
SRSF1-201ENST00000258962 NAA30Q147X3 362 aaPredicted RBP18.53■□□□□ 0.56
SRSF1-201ENST00000258962 SKIV2LQ15477 1246 aaKnown RBP18.53■□□□□ 0.56
SRSF1-201ENST00000258962 SLC4A11Q8NBS3 891 aa18.53■□□□□ 0.56
SRSF1-201ENST00000258962 GSTCDQ8NEC7 633 aa18.53■□□□□ 0.56
SRSF1-201ENST00000258962 ZNF653Q96CK0 615 aa18.53■□□□□ 0.56
SRSF1-201ENST00000258962 PPP1R10Q96QC0 940 aaKnown RBP18.53■□□□□ 0.56
SRSF1-201ENST00000258962 RPS6KC1Q96S38 1066 aa18.53■□□□□ 0.56
SRSF1-201ENST00000258962 PDCL3Q9H2J4 239 aa18.53■□□□□ 0.56
SRSF1-201ENST00000258962 CHORDC1Q9UHD1 332 aaPredicted RBP18.53■□□□□ 0.56
SRSF1-201ENST00000258962 TADA3O75528 432 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 142.7 ms