RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 ACOT1Q86TX2 421 aa15.45■□□□□ 0.06
TRAFD1-201ENST00000257604 SPATS2Q86XZ4 545 aaKnown RBP15.45■□□□□ 0.06
TRAFD1-201ENST00000257604 C16orf70Q9BSU1 422 aa15.45■□□□□ 0.06
TRAFD1-201ENST00000257604 RAB6CQ9H0N0 254 aa15.45■□□□□ 0.06
TRAFD1-201ENST00000257604 FZD8Q9H461 694 aa15.45■□□□□ 0.06
TRAFD1-201ENST00000257604 PDZD7Q9H5P4 517 aa15.45■□□□□ 0.06
TRAFD1-201ENST00000257604 PRMT7Q9NVM4 692 aaPredicted RBP15.45■□□□□ 0.06
TRAFD1-201ENST00000257604 SUFUQ9UMX1 484 aa15.45■□□□□ 0.06
TRAFD1-201ENST00000257604 KIAA0391O15091 583 aaKnown RBP15.45■□□□□ 0.06
TRAFD1-201ENST00000257604 TRAPPC3O43617 180 aa15.45■□□□□ 0.06
TRAFD1-201ENST00000257604 PROSCO94903 275 aa15.45■□□□□ 0.06
TRAFD1-201ENST00000257604 CYP2C9P11712 490 aa15.45■□□□□ 0.06
TRAFD1-201ENST00000257604 LRRC14Q15048 493 aa15.45■□□□□ 0.06
TRAFD1-201ENST00000257604 TAF5Q15542 800 aa15.45■□□□□ 0.06
TRAFD1-201ENST00000257604 SH3PXD2AQ5TCZ1 1133 aa15.45■□□□□ 0.06
TRAFD1-201ENST00000257604 HIBCHQ6NVY1 386 aaPredicted RBP15.45■□□□□ 0.06
TRAFD1-201ENST00000257604 TSHZ1Q6ZSZ6 1077 aa15.45■□□□□ 0.06
TRAFD1-201ENST00000257604 ARFGAP2Q8N6H7 521 aa15.45■□□□□ 0.06
TRAFD1-201ENST00000257604 OR6B3Q8NGW1 331 aa15.45■□□□□ 0.06
TRAFD1-201ENST00000257604 C9orf72Q96LT7 481 aa15.45■□□□□ 0.06
TRAFD1-201ENST00000257604 WDR81Q562E7 1941 aa15.45■□□□□ 0.06
TRAFD1-201ENST00000257604 F5H423 210 aaPredicted RBP15.44■□□□□ 0.06
TRAFD1-201ENST00000257604 FAM189A1O60320 539 aa15.44■□□□□ 0.06
TRAFD1-201ENST00000257604 PIGRP01833 764 aa15.44■□□□□ 0.06
TRAFD1-201ENST00000257604 KRT3P12035 628 aa15.44■□□□□ 0.06
TRAFD1-201ENST00000257604 ASPAP45381 313 aa15.44■□□□□ 0.06
TRAFD1-201ENST00000257604 PMS2P54278 862 aa15.44■□□□□ 0.06
TRAFD1-201ENST00000257604 PPP2R2AP63151 447 aa15.44■□□□□ 0.06
TRAFD1-201ENST00000257604 DGKDQ16760 1214 aa15.44■□□□□ 0.06
TRAFD1-201ENST00000257604 PTPN20Q4JDL3 420 aa15.44■□□□□ 0.06
TRAFD1-201ENST00000257604 FAM102AQ5T9C2 384 aaPredicted RBP15.44■□□□□ 0.06
TRAFD1-201ENST00000257604 RHOT1Q8IXI2 618 aa15.44■□□□□ 0.06
TRAFD1-201ENST00000257604 CACNA2D3Q8IZS8 1091 aa15.44■□□□□ 0.06
TRAFD1-201ENST00000257604 THOC1Q96FV9 657 aaKnown RBP15.44■□□□□ 0.06
TRAFD1-201ENST00000257604 CPXM1Q96SM3 734 aa15.44■□□□□ 0.06
TRAFD1-201ENST00000257604 NXF3Q9H4D5 531 aaKnown RBP15.44■□□□□ 0.06
TRAFD1-201ENST00000257604 MTRF1LQ9UGC7 380 aaKnown RBP15.44■□□□□ 0.06
TRAFD1-201ENST00000257604 CYTH4Q9UIA0 394 aa15.44■□□□□ 0.06
TRAFD1-201ENST00000257604 PASKQ96RG2 1323 aa15.44■□□□□ 0.06
TRAFD1-201ENST00000257604 CYP1A1P04798 512 aaPredicted RBP15.44■□□□□ 0.06
TRAFD1-201ENST00000257604 C6orf222P0C671 652 aaPredicted RBP15.44■□□□□ 0.06
TRAFD1-201ENST00000257604 RABGGTBP53611 331 aa15.44■□□□□ 0.06
TRAFD1-201ENST00000257604 FAM228AQ86W67 206 aa15.44■□□□□ 0.06
TRAFD1-201ENST00000257604 FUKQ8N0W3 1084 aa15.44■□□□□ 0.06
TRAFD1-201ENST00000257604 NETO2Q8NC67 525 aa15.44■□□□□ 0.06
TRAFD1-201ENST00000257604 EPS8L3Q8TE67 593 aaKnown RBP15.44■□□□□ 0.06
TRAFD1-201ENST00000257604 CD101Q93033 1021 aa15.44■□□□□ 0.06
TRAFD1-201ENST00000257604 L3MBTL3Q96JM7 780 aaPredicted RBP15.44■□□□□ 0.06
TRAFD1-201ENST00000257604 TACO1Q9BSH4 297 aaKnown RBP15.44■□□□□ 0.06
TRAFD1-201ENST00000257604 DPP3Q9NY33 737 aa15.44■□□□□ 0.06
TRAFD1-201ENST00000257604 KAT6AQ92794 2004 aa15.44■□□□□ 0.06
TRAFD1-201ENST00000257604 CES2O00748 559 aa15.44■□□□□ 0.06
TRAFD1-201ENST00000257604 CAND2O75155 1236 aa15.44■□□□□ 0.06
TRAFD1-201ENST00000257604 ADORA2BP29275 332 aa15.44■□□□□ 0.06
TRAFD1-201ENST00000257604 NDST1P52848 882 aa15.44■□□□□ 0.06
TRAFD1-201ENST00000257604 LONRF1Q17RB8 773 aa15.44■□□□□ 0.06
TRAFD1-201ENST00000257604 ANKRD20A8PQ5CZ79 823 aa15.44■□□□□ 0.06
TRAFD1-201ENST00000257604 YTHDF3Q7Z739 585 aaKnown RBP15.44■□□□□ 0.06
TRAFD1-201ENST00000257604 TBC1D1Q86TI0 1168 aaPredicted RBP15.44■□□□□ 0.06
TRAFD1-201ENST00000257604 PARP9Q8IXQ6 854 aa15.44■□□□□ 0.06
TRAFD1-201ENST00000257604 WDTC1Q8N5D0 677 aa15.44■□□□□ 0.06
TRAFD1-201ENST00000257604 GLIS1Q8NBF1 620 aa15.44■□□□□ 0.06
TRAFD1-201ENST00000257604 XYLT2Q9H1B5 865 aa15.44■□□□□ 0.06
TRAFD1-201ENST00000257604 L3MBTL1Q9Y468 752 aa15.44■□□□□ 0.06
TRAFD1-201ENST00000257604 PARP14Q460N5 1801 aa15.43■□□□□ 0.06
TRAFD1-201ENST00000257604 PMM2O15305 246 aa15.43■□□□□ 0.06
TRAFD1-201ENST00000257604 TREHO43280 583 aa15.43■□□□□ 0.06
TRAFD1-201ENST00000257604 MMP3P08254 477 aa15.43■□□□□ 0.06
TRAFD1-201ENST00000257604 ABCD1P33897 745 aa15.43■□□□□ 0.06
TRAFD1-201ENST00000257604 CHKAP35790 457 aa15.43■□□□□ 0.06
TRAFD1-201ENST00000257604 SCTRP47872 440 aa15.43■□□□□ 0.06
TRAFD1-201ENST00000257604 SNCBQ16143 134 aa15.43■□□□□ 0.06
TRAFD1-201ENST00000257604 KYNUQ16719 465 aa15.43■□□□□ 0.06
TRAFD1-201ENST00000257604 CCDC142Q17RM4 750 aa15.43■□□□□ 0.06
TRAFD1-201ENST00000257604 ACCSLQ4AC99 568 aa15.43■□□□□ 0.06
TRAFD1-201ENST00000257604 SPRYD7Q5W111 196 aa15.43■□□□□ 0.06
TRAFD1-201ENST00000257604 DUPD1Q68J44 220 aa15.43■□□□□ 0.06
TRAFD1-201ENST00000257604 NGRNQ9NPE2 291 aaKnown RBP15.43■□□□□ 0.06
TRAFD1-201ENST00000257604 GPATCH2LQ9NWQ4 482 aa15.43■□□□□ 0.06
TRAFD1-201ENST00000257604 FLRT1Q9NZU1 646 aa15.43■□□□□ 0.06
TRAFD1-201ENST00000257604 TUBGCP4Q9UGJ1 667 aa15.43■□□□□ 0.06
TRAFD1-201ENST00000257604 TPX2Q9ULW0 747 aaKnown RBP15.43■□□□□ 0.06
TRAFD1-201ENST00000257604 DIS3Q9Y2L1 958 aaKnown RBP15.43■□□□□ 0.06
TRAFD1-201ENST00000257604 IGKV6-21A0A0C4DH24 114 aa15.43■□□□□ 0.06
TRAFD1-201ENST00000257604 SGK1O00141 431 aa15.43■□□□□ 0.06
TRAFD1-201ENST00000257604 ABLIM1O14639 778 aa15.43■□□□□ 0.06
TRAFD1-201ENST00000257604 BYSLQ13895 437 aaKnown RBP15.43■□□□□ 0.06
TRAFD1-201ENST00000257604 CDCA2Q69YH5 1023 aaPredicted RBP15.43■□□□□ 0.06
TRAFD1-201ENST00000257604 RUFY4Q6ZNE9 571 aa15.43■□□□□ 0.06
TRAFD1-201ENST00000257604 PPTC7Q8NI37 304 aa15.43■□□□□ 0.06
TRAFD1-201ENST00000257604 PIWIL1Q96J94 861 aaKnown RBP15.43■□□□□ 0.06
TRAFD1-201ENST00000257604 PARK7Q99497 189 aaKnown RBP15.43■□□□□ 0.06
TRAFD1-201ENST00000257604 TMEM121Q9BTD3 319 aa15.43■□□□□ 0.06
TRAFD1-201ENST00000257604 ELOVL4Q9GZR5 314 aa15.43■□□□□ 0.06
TRAFD1-201ENST00000257604 VIMP08670 466 aaKnown RBP15.42■□□□□ 0.06
TRAFD1-201ENST00000257604 CD48P09326 243 aa15.42■□□□□ 0.06
TRAFD1-201ENST00000257604 ITGA8P53708 1063 aa15.42■□□□□ 0.06
TRAFD1-201ENST00000257604 CLDN10P78369 228 aa15.42■□□□□ 0.06
TRAFD1-201ENST00000257604 POU5F1Q01860 360 aaKnown RBP15.42■□□□□ 0.06
TRAFD1-201ENST00000257604 NAA25Q14CX7 972 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms