RNA–Protein interactions for RNA: ENST00000254231.4

LIN28A-201, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 3,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-201ENST00000254231 ZNF410Q86VK4 478 aa12.32□□□□□ -0.44
LIN28A-201ENST00000254231 JOSD2Q8TAC2 188 aa12.32□□□□□ -0.44
LIN28A-201ENST00000254231 TMEM176AQ96HP8 235 aa12.32□□□□□ -0.44
LIN28A-201ENST00000254231 TMEM209Q96SK2 561 aa12.32□□□□□ -0.44
LIN28A-201ENST00000254231 TRIM51Q9BSJ1 452 aa12.32□□□□□ -0.44
LIN28A-201ENST00000254231 CEP41Q9BYV8 373 aa12.32□□□□□ -0.44
LIN28A-201ENST00000254231 LRRC4Q9HBW1 653 aa12.32□□□□□ -0.44
LIN28A-201ENST00000254231 FNDC3AQ9Y2H6 1198 aaKnown RBP12.32□□□□□ -0.44
LIN28A-201ENST00000254231 ATG2BQ96BY7 2078 aa12.32□□□□□ -0.44
LIN28A-201ENST00000254231 ADGRA2Q96PE1 1338 aa12.32□□□□□ -0.44
LIN28A-201ENST00000254231 UNCXA6NJT0 531 aa12.32□□□□□ -0.44
LIN28A-201ENST00000254231 GOLGA8MH3BSY2 632 aa12.32□□□□□ -0.44
LIN28A-201ENST00000254231 BNIP3LO60238 219 aa12.32□□□□□ -0.44
LIN28A-201ENST00000254231 RTN2O75298 545 aa12.32□□□□□ -0.44
LIN28A-201ENST00000254231 CPB1P15086 417 aa12.32□□□□□ -0.44
LIN28A-201ENST00000254231 EN2P19622 333 aaPredicted RBP12.32□□□□□ -0.44
LIN28A-201ENST00000254231 NRLP54845 237 aa12.32□□□□□ -0.44
LIN28A-201ENST00000254231 CFAP221Q4G0U5 840 aa12.32□□□□□ -0.44
LIN28A-201ENST00000254231 TXNRD3NBQ6F5E7 133 aa12.32□□□□□ -0.44
LIN28A-201ENST00000254231 ZC3H18Q86VM9 953 aaKnown RBP12.32□□□□□ -0.44
LIN28A-201ENST00000254231 HACE1Q8IYU2 909 aa12.32□□□□□ -0.44
LIN28A-201ENST00000254231 ADGRF2Q8IZF7 708 aa12.32□□□□□ -0.44
LIN28A-201ENST00000254231 SMG8Q8ND04 991 aaKnown RBP12.32□□□□□ -0.44
LIN28A-201ENST00000254231 C3orf58Q8NDZ4 430 aa12.32□□□□□ -0.44
LIN28A-201ENST00000254231 RFFLQ8WZ73 363 aa12.32□□□□□ -0.44
LIN28A-201ENST00000254231 ALG3Q92685 438 aa12.32□□□□□ -0.44
LIN28A-201ENST00000254231 MAGOHBQ96A72 148 aaKnown RBP12.32□□□□□ -0.44
LIN28A-201ENST00000254231 CFAP57Q96MR6 1250 aa12.32□□□□□ -0.44
LIN28A-201ENST00000254231 FAM161BQ96MY7 647 aa12.32□□□□□ -0.44
LIN28A-201ENST00000254231 NACA2Q9H009 215 aa12.32□□□□□ -0.44
LIN28A-201ENST00000254231 TMPRSS4Q9NRS4 437 aa12.32□□□□□ -0.44
LIN28A-201ENST00000254231 PIH1D1Q9NWS0 290 aaKnown RBP12.32□□□□□ -0.44
LIN28A-201ENST00000254231 CNTRLQ7Z7A1 2325 aa12.32□□□□□ -0.44
LIN28A-201ENST00000254231 TLDC2A0PJX2 215 aa12.32□□□□□ -0.44
LIN28A-201ENST00000254231 MYBPHLA2RUH7 354 aa12.32□□□□□ -0.44
LIN28A-201ENST00000254231 PDGFRAP16234 1089 aa12.32□□□□□ -0.44
LIN28A-201ENST00000254231 TBXAS1P24557 533 aaPredicted RBP12.32□□□□□ -0.44
LIN28A-201ENST00000254231 TAF6P49848 677 aa12.32□□□□□ -0.44
LIN28A-201ENST00000254231 DCAF6Q58WW2 860 aa12.32□□□□□ -0.44
LIN28A-201ENST00000254231 C18orf8Q96DM3 657 aa12.32□□□□□ -0.44
LIN28A-201ENST00000254231 PNKPQ96T60 521 aa12.32□□□□□ -0.44
LIN28A-201ENST00000254231 SEPT5Q99719 369 aaPredicted RBP12.32□□□□□ -0.44
LIN28A-201ENST00000254231 SNX12Q9UMY4 172 aa12.32□□□□□ -0.44
LIN28A-201ENST00000254231 RBM47A0AV96 593 aaKnown RBP12.31□□□□□ -0.44
LIN28A-201ENST00000254231 GTPBP10A4D1E9 387 aaKnown RBP12.31□□□□□ -0.44
LIN28A-201ENST00000254231 MICAL2O94851 1124 aa12.31□□□□□ -0.44
LIN28A-201ENST00000254231 FAM171A1Q5VUB5 890 aa12.31□□□□□ -0.44
LIN28A-201ENST00000254231 AGMOQ6ZNB7 445 aa12.31□□□□□ -0.44
LIN28A-201ENST00000254231 APBB1IPQ7Z5R6 666 aaPredicted RBP12.31□□□□□ -0.44
LIN28A-201ENST00000254231 IPO4Q8TEX9 1081 aaKnown RBP12.31□□□□□ -0.44
LIN28A-201ENST00000254231 PTPRHQ9HD43 1115 aa12.31□□□□□ -0.44
LIN28A-201ENST00000254231 ZCCHC17Q9NP64 241 aaKnown RBP12.31□□□□□ -0.44
LIN28A-201ENST00000254231 UBQLN1Q9UMX0 589 aaKnown RBP12.31□□□□□ -0.44
LIN28A-201ENST00000254231 L1RE1Q9UN81 338 aa12.31□□□□□ -0.44
LIN28A-201ENST00000254231 DCDC2CA8MYV0 355 aa12.31□□□□□ -0.44
LIN28A-201ENST00000254231 PODXLO00592 558 aa12.31□□□□□ -0.44
LIN28A-201ENST00000254231 CREB3O43889 395 aa12.31□□□□□ -0.44
LIN28A-201ENST00000254231 KIF4AO95239 1232 aa12.31□□□□□ -0.44
LIN28A-201ENST00000254231 ASPAP45381 313 aa12.31□□□□□ -0.44
LIN28A-201ENST00000254231 BPIFB4P59827 614 aa12.31□□□□□ -0.44
LIN28A-201ENST00000254231 LILRA4P59901 499 aa12.31□□□□□ -0.44
LIN28A-201ENST00000254231 VSNL1P62760 191 aa12.31□□□□□ -0.44
LIN28A-201ENST00000254231 PPP1R7Q15435 360 aa12.31□□□□□ -0.44
LIN28A-201ENST00000254231 IFI16Q16666 785 aaKnown RBP12.31□□□□□ -0.44
LIN28A-201ENST00000254231 C9orf57Q5W0N0 161 aa12.31□□□□□ -0.44
LIN28A-201ENST00000254231 ACAD10Q6JQN1 1059 aa12.31□□□□□ -0.44
LIN28A-201ENST00000254231 RSRC2Q7L4I2 434 aaKnown RBP12.31□□□□□ -0.44
LIN28A-201ENST00000254231 FAM131BQ86XD5 332 aa12.31□□□□□ -0.44
LIN28A-201ENST00000254231 SPATA4Q8NEY3 305 aa12.31□□□□□ -0.44
LIN28A-201ENST00000254231 XYLT2Q9H1B5 865 aa12.31□□□□□ -0.44
LIN28A-201ENST00000254231 IL18RAPO95256 599 aa12.31□□□□□ -0.44
LIN28A-201ENST00000254231 CSF2RAP15509 400 aa12.31□□□□□ -0.44
LIN28A-201ENST00000254231 GRIK1P39086 918 aa12.31□□□□□ -0.44
LIN28A-201ENST00000254231 SOWAHAQ2M3V2 549 aa12.31□□□□□ -0.44
LIN28A-201ENST00000254231 ASTE1Q2TB18 679 aaPredicted RBP12.31□□□□□ -0.44
LIN28A-201ENST00000254231 CC2D1AQ6P1N0 951 aaPredicted RBP12.31□□□□□ -0.44
LIN28A-201ENST00000254231 LEKR1Q6ZMV7 388 aa12.31□□□□□ -0.44
LIN28A-201ENST00000254231 C12orf56Q8IXR9 622 aa12.31□□□□□ -0.44
LIN28A-201ENST00000254231 MICALL1Q8N3F8 863 aa12.31□□□□□ -0.44
LIN28A-201ENST00000254231 ATAD1Q8NBU5 361 aa12.31□□□□□ -0.44
LIN28A-201ENST00000254231 RNPC3Q96LT9 517 aaKnown RBP12.31□□□□□ -0.44
LIN28A-201ENST00000254231 SEPT10Q9P0V9 454 aa12.31□□□□□ -0.44
LIN28A-201ENST00000254231 PRKAG2Q9UGJ0 569 aa12.31□□□□□ -0.44
LIN28A-201ENST00000254231 NOCTQ9UK39 431 aaKnown RBP12.31□□□□□ -0.44
LIN28A-201ENST00000254231 PCDHB7Q9Y5E2 793 aa12.31□□□□□ -0.44
LIN28A-201ENST00000254231 ABLIM1O14639 778 aa12.3□□□□□ -0.44
LIN28A-201ENST00000254231 KRT1P04264 644 aa12.3□□□□□ -0.44
LIN28A-201ENST00000254231 HSPA1AP0DMV8 641 aaKnown RBP12.3□□□□□ -0.44
LIN28A-201ENST00000254231 HSPA1BP0DMV9 641 aaKnown RBP12.3□□□□□ -0.44
LIN28A-201ENST00000254231 PYGMP11217 842 aa12.3□□□□□ -0.44
LIN28A-201ENST00000254231 SURF1Q15526 300 aa12.3□□□□□ -0.44
LIN28A-201ENST00000254231 DDR2Q16832 855 aa12.3□□□□□ -0.44
LIN28A-201ENST00000254231 PTPN20Q4JDL3 420 aa12.3□□□□□ -0.44
LIN28A-201ENST00000254231 SND1Q7KZF4 910 aaKnown RBP eCLIP12.3□□□□□ -0.44
LIN28A-201ENST00000254231 MIB1Q86YT6 1006 aa12.3□□□□□ -0.44
LIN28A-201ENST00000254231 TXLNBQ8N3L3 684 aa12.3□□□□□ -0.44
LIN28A-201ENST00000254231 CEP112Q8N8E3 955 aa12.3□□□□□ -0.44
LIN28A-201ENST00000254231 PPM1EQ8WY54 764 aa12.3□□□□□ -0.44
LIN28A-201ENST00000254231 RIN2Q8WYP3 895 aaPredicted RBP12.3□□□□□ -0.44
LIN28A-201ENST00000254231 NFU1Q9UMS0 254 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms