RNA–Protein interactions for RNA: ENST00000253251.12

UBE4B-201, Transcript of ubiquitination factor E4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE4B, Length 4,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-201ENST00000253251 SPATA20Q8TB22 786 aa15.69■□□□□ 0.1
UBE4B-201ENST00000253251 UMODL1Q5DID0 1318 aa15.69■□□□□ 0.1
UBE4B-201ENST00000253251 SETD1AO15047 1707 aaKnown RBP15.69■□□□□ 0.1
UBE4B-201ENST00000253251 GMNCA6NCL1 334 aa15.69■□□□□ 0.1
UBE4B-201ENST00000253251 NOL9Q5SY16 702 aaKnown RBP15.69■□□□□ 0.1
UBE4B-201ENST00000253251 CCNJLQ8IV13 435 aa15.69■□□□□ 0.1
UBE4B-201ENST00000253251 CALML6Q8TD86 181 aa15.69■□□□□ 0.1
UBE4B-201ENST00000253251 DNAJB3Q8WWF6 145 aa15.69■□□□□ 0.1
UBE4B-201ENST00000253251 LRGUKQ96M69 825 aa15.69■□□□□ 0.1
UBE4B-201ENST00000253251 SERPINI1Q99574 410 aa15.69■□□□□ 0.1
UBE4B-201ENST00000253251 TRIM51Q9BSJ1 452 aa15.69■□□□□ 0.1
UBE4B-201ENST00000253251 PIK3R2O00459 728 aa15.69■□□□□ 0.1
UBE4B-201ENST00000253251 NOGQ13253 232 aa15.69■□□□□ 0.1
UBE4B-201ENST00000253251 POP1Q99575 1024 aaKnown RBP15.69■□□□□ 0.1
UBE4B-201ENST00000253251 MRPL9Q9BYD2 267 aaKnown RBP15.69■□□□□ 0.1
UBE4B-201ENST00000253251 HMX1Q9NP08 348 aaPredicted RBP15.69■□□□□ 0.1
UBE4B-201ENST00000253251 FNDC3AQ9Y2H6 1198 aaKnown RBP15.69■□□□□ 0.1
UBE4B-201ENST00000253251 LTBP3Q9NS15 1303 aa15.69■□□□□ 0.1
UBE4B-201ENST00000253251 CCDC160A6NGH7 325 aa15.68■□□□□ 0.1
UBE4B-201ENST00000253251 SNX2O60749 519 aa15.68■□□□□ 0.1
UBE4B-201ENST00000253251 APRTP07741 180 aa15.68■□□□□ 0.1
UBE4B-201ENST00000253251 TYK2P29597 1187 aa15.68■□□□□ 0.1
UBE4B-201ENST00000253251 HSPA9P38646 679 aaKnown RBP15.68■□□□□ 0.1
UBE4B-201ENST00000253251 KPNA1P52294 538 aaPredicted RBP15.68■□□□□ 0.1
UBE4B-201ENST00000253251 MAPK7Q13164 816 aa15.68■□□□□ 0.1
UBE4B-201ENST00000253251 CYP4A22Q5TCH4 519 aa15.68■□□□□ 0.1
UBE4B-201ENST00000253251 WDR93Q6P2C0 686 aa15.68■□□□□ 0.1
UBE4B-201ENST00000253251 FRA10AC1Q70Z53 315 aa15.68■□□□□ 0.1
UBE4B-201ENST00000253251 LINC00523Q86TU6 105 aa15.68■□□□□ 0.1
UBE4B-201ENST00000253251 MYLK4Q86YV6 388 aaPredicted RBP15.68■□□□□ 0.1
UBE4B-201ENST00000253251 PDCD6IPQ8WUM4 868 aaKnown RBP15.68■□□□□ 0.1
UBE4B-201ENST00000253251 TSPAN17Q96FV3 270 aa15.68■□□□□ 0.1
UBE4B-201ENST00000253251 ZC3H7BQ9UGR2 993 aaKnown RBP15.68■□□□□ 0.1
UBE4B-201ENST00000253251 RGPD1P0DJD0 1748 aa15.68■□□□□ 0.1
UBE4B-201ENST00000253251 MROH7Q68CQ1 1323 aa15.68■□□□□ 0.1
UBE4B-201ENST00000253251 GRAP2O75791 330 aa15.68■□□□□ 0.1
UBE4B-201ENST00000253251 UPP2O95045 317 aa15.68■□□□□ 0.1
UBE4B-201ENST00000253251 ZBTB48P10074 688 aaPredicted RBP15.68■□□□□ 0.1
UBE4B-201ENST00000253251 ACAP1Q15027 740 aa15.68■□□□□ 0.1
UBE4B-201ENST00000253251 FAM110CQ1W6H9 321 aa15.68■□□□□ 0.1
UBE4B-201ENST00000253251 TFDP3Q5H9I0 405 aa15.68■□□□□ 0.1
UBE4B-201ENST00000253251 MEI1Q5TIA1 1274 aa15.68■□□□□ 0.1
UBE4B-201ENST00000253251 NAPEPLDQ6IQ20 393 aa15.68■□□□□ 0.1
UBE4B-201ENST00000253251 TMEM161BQ8NDZ6 487 aa15.68■□□□□ 0.1
UBE4B-201ENST00000253251 XPO7Q9UIA9 1087 aaKnown RBP15.68■□□□□ 0.1
UBE4B-201ENST00000253251 UNCXA6NJT0 531 aa15.68■□□□□ 0.1
UBE4B-201ENST00000253251 PDCLQ13371 301 aa15.68■□□□□ 0.1
UBE4B-201ENST00000253251 IL17AQ16552 155 aa15.68■□□□□ 0.1
UBE4B-201ENST00000253251 LRRC55Q6ZSA7 311 aa15.68■□□□□ 0.1
UBE4B-201ENST00000253251 GPR142Q7Z601 462 aa15.68■□□□□ 0.1
UBE4B-201ENST00000253251 OR6P1Q8NGX9 317 aa15.68■□□□□ 0.1
UBE4B-201ENST00000253251 CDK5RAP1Q96SZ6 601 aaKnown RBP15.68■□□□□ 0.1
UBE4B-201ENST00000253251 EFHD1Q9BUP0 239 aa15.68■□□□□ 0.1
UBE4B-201ENST00000253251 PRDM16Q9HAZ2 1276 aa15.68■□□□□ 0.1
UBE4B-201ENST00000253251 KCND1Q9NSA2 647 aa15.68■□□□□ 0.1
UBE4B-201ENST00000253251 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.68■□□□□ 0.1
UBE4B-201ENST00000253251 VAV3Q9UKW4 847 aa15.68■□□□□ 0.1
UBE4B-201ENST00000253251 LRRIQ3A6PVS8 624 aaPredicted RBP15.68■□□□□ 0.1
UBE4B-201ENST00000253251 TOMM70O94826 608 aa15.68■□□□□ 0.1
UBE4B-201ENST00000253251 SPATA31C1P0DKV0 1188 aa15.68■□□□□ 0.1
UBE4B-201ENST00000253251 GLRA2P23416 452 aa15.68■□□□□ 0.1
UBE4B-201ENST00000253251 RCN2Q14257 317 aa15.68■□□□□ 0.1
UBE4B-201ENST00000253251 NFIL3Q16649 462 aa15.68■□□□□ 0.1
UBE4B-201ENST00000253251 ACAD11Q709F0 780 aa15.68■□□□□ 0.1
UBE4B-201ENST00000253251 PSMC3IPQ9P2W1 217 aaPredicted RBP15.68■□□□□ 0.1
UBE4B-201ENST00000253251 TRIM33Q9UPN9 1127 aa15.68■□□□□ 0.1
UBE4B-201ENST00000253251 WDR91A4D1P6 747 aa15.67■□□□□ 0.1
UBE4B-201ENST00000253251 CSPG5O95196 566 aa15.67■□□□□ 0.1
UBE4B-201ENST00000253251 NCKAP1LP55160 1127 aa15.67■□□□□ 0.1
UBE4B-201ENST00000253251 ARHGAP15Q53QZ3 475 aa15.67■□□□□ 0.1
UBE4B-201ENST00000253251 MCOLN2Q8IZK6 566 aa15.67■□□□□ 0.1
UBE4B-201ENST00000253251 GANCQ8TET4 914 aa15.67■□□□□ 0.1
UBE4B-201ENST00000253251 MMTAG2Q9BU76 263 aaKnown RBP15.67■□□□□ 0.1
UBE4B-201ENST00000253251 SNTG2Q9NY99 539 aa15.67■□□□□ 0.1
UBE4B-201ENST00000253251 APOBEC2Q9Y235 224 aaKnown RBP15.67■□□□□ 0.1
UBE4B-201ENST00000253251 SIK3Q9Y2K2 1263 aa15.67■□□□□ 0.1
UBE4B-201ENST00000253251 KDM3BQ7LBC6 1761 aa15.67■□□□□ 0.1
UBE4B-201ENST00000253251 ANXA9O76027 345 aa15.67■□□□□ 0.1
UBE4B-201ENST00000253251 ESRRAP11474 423 aaPredicted RBP15.67■□□□□ 0.1
UBE4B-201ENST00000253251 EIF4BP23588 611 aaKnown RBP15.67■□□□□ 0.1
UBE4B-201ENST00000253251 RRM1P23921 792 aa15.67■□□□□ 0.1
UBE4B-201ENST00000253251 SLC11A2P49281 568 aa15.67■□□□□ 0.1
UBE4B-201ENST00000253251 SOX10P56693 466 aa15.67■□□□□ 0.1
UBE4B-201ENST00000253251 YAF2Q8IY57 180 aa15.67■□□□□ 0.1
UBE4B-201ENST00000253251 ZNF606Q8WXB4 792 aa15.67■□□□□ 0.1
UBE4B-201ENST00000253251 RMDN1Q96DB5 314 aa15.67■□□□□ 0.1
UBE4B-201ENST00000253251 SGSM3Q96HU1 749 aa15.67■□□□□ 0.1
UBE4B-201ENST00000253251 WDCPQ9H6R7 721 aa15.67■□□□□ 0.1
UBE4B-201ENST00000253251 DDIT4Q9NX09 232 aa15.67■□□□□ 0.1
UBE4B-201ENST00000253251 SH3BP1Q9Y3L3 701 aa15.67■□□□□ 0.1
UBE4B-201ENST00000253251 M0QYT0 321 aa15.67■□□□□ 0.1
UBE4B-201ENST00000253251 ZNF135P52742 658 aaPredicted RBP15.67■□□□□ 0.1
UBE4B-201ENST00000253251 TMEM86AQ8N2M4 240 aa15.67■□□□□ 0.1
UBE4B-201ENST00000253251 TRIM54Q9BYV2 358 aa15.67■□□□□ 0.1
UBE4B-201ENST00000253251 ACO1P21399 889 aaKnown RBP15.67■□□□□ 0.1
UBE4B-201ENST00000253251 TSTA3Q13630 321 aaPredicted RBP15.67■□□□□ 0.1
UBE4B-201ENST00000253251 SLC47A2Q86VL8 602 aa15.67■□□□□ 0.1
UBE4B-201ENST00000253251 UNC93AQ86WB7 457 aa15.67■□□□□ 0.1
UBE4B-201ENST00000253251 CHSY1Q86X52 802 aa15.67■□□□□ 0.1
UBE4B-201ENST00000253251 USP13Q92995 863 aaPredicted RBP15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms