RNA–Protein interactions for RNA: ENST00000252456.6

CNN1-201, Transcript of calponin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNN1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-201ENST00000252456 TAF4BQ92750 862 aa15.22■□□□□ 0.03
CNN1-201ENST00000252456 SEMA4DQ92854 862 aa15.22■□□□□ 0.03
CNN1-201ENST00000252456 FGF13Q92913 245 aa15.22■□□□□ 0.03
CNN1-201ENST00000252456 ACSF2Q96CM8 615 aaPredicted RBP15.22■□□□□ 0.03
CNN1-201ENST00000252456 TCEAL4Q96EI5 215 aa15.22■□□□□ 0.03
CNN1-201ENST00000252456 CORO1BQ9BR76 489 aa15.22■□□□□ 0.03
CNN1-201ENST00000252456 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.22■□□□□ 0.03
CNN1-201ENST00000252456 LIMD1Q9UGP4 676 aa15.22■□□□□ 0.03
CNN1-201ENST00000252456 CDH9Q9ULB4 789 aa15.22■□□□□ 0.03
CNN1-201ENST00000252456 DENND4CQ5VZ89 1909 aa15.22■□□□□ 0.03
CNN1-201ENST00000252456 DCXO43602 365 aa15.21■□□□□ 0.03
CNN1-201ENST00000252456 MOSPD3O75425 235 aa15.21■□□□□ 0.03
CNN1-201ENST00000252456 PDGFRBP09619 1106 aa15.21■□□□□ 0.03
CNN1-201ENST00000252456 HAPLN1P10915 354 aaPredicted RBP15.21■□□□□ 0.03
CNN1-201ENST00000252456 LAMP2P13473 410 aa15.21■□□□□ 0.03
CNN1-201ENST00000252456 GBP2P32456 591 aaPredicted RBP15.21■□□□□ 0.03
CNN1-201ENST00000252456 NOP14P78316 857 aaKnown RBP15.21■□□□□ 0.03
CNN1-201ENST00000252456 DPCR1Q3MIW9 517 aa15.21■□□□□ 0.03
CNN1-201ENST00000252456 DCAF17Q5H9S7 520 aaPredicted RBP15.21■□□□□ 0.03
CNN1-201ENST00000252456 RBM43Q6ZSC3 357 aaKnown RBP15.21■□□□□ 0.03
CNN1-201ENST00000252456 FRMD5Q7Z6J6 570 aa15.21■□□□□ 0.03
CNN1-201ENST00000252456 NPAS3Q8IXF0 933 aa15.21■□□□□ 0.03
CNN1-201ENST00000252456 SEPT5Q99719 369 aaPredicted RBP15.21■□□□□ 0.03
CNN1-201ENST00000252456 LPIN3Q9BQK8 851 aa15.21■□□□□ 0.03
CNN1-201ENST00000252456 BCO2Q9BYV7 579 aa15.21■□□□□ 0.03
CNN1-201ENST00000252456 DPEP3Q9H4B8 488 aa15.21■□□□□ 0.03
CNN1-201ENST00000252456 ABCB6Q9NP58 842 aa15.21■□□□□ 0.03
CNN1-201ENST00000252456 C11orf16Q9NQ32 467 aa15.21■□□□□ 0.03
CNN1-201ENST00000252456 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.21■□□□□ 0.03
CNN1-201ENST00000252456 RWDD2AQ9UIY3 292 aa15.21■□□□□ 0.03
CNN1-201ENST00000252456 PCDHB5Q9Y5E4 795 aa15.21■□□□□ 0.03
CNN1-201ENST00000252456 GOLGA6L22H0YM25 854 aa15.21■□□□□ 0.02
CNN1-201ENST00000252456 CEBPBP17676 345 aa15.21■□□□□ 0.02
CNN1-201ENST00000252456 GNL1P36915 607 aaPredicted RBP15.21■□□□□ 0.02
CNN1-201ENST00000252456 ALDH1A3P47895 512 aa15.21■□□□□ 0.02
CNN1-201ENST00000252456 TUFMP49411 452 aaKnown RBP15.21■□□□□ 0.02
CNN1-201ENST00000252456 PLD1Q13393 1074 aa15.21■□□□□ 0.02
CNN1-201ENST00000252456 PTPN21Q16825 1174 aa15.21■□□□□ 0.02
CNN1-201ENST00000252456 MGAT5BQ3V5L5 792 aa15.21■□□□□ 0.02
CNN1-201ENST00000252456 CFAP221Q4G0U5 840 aa15.21■□□□□ 0.02
CNN1-201ENST00000252456 TCERG1LQ5VWI1 586 aa15.21■□□□□ 0.02
CNN1-201ENST00000252456 MLKLQ8NB16 471 aa15.21■□□□□ 0.02
CNN1-201ENST00000252456 OR6B3Q8NGW1 331 aa15.21■□□□□ 0.02
CNN1-201ENST00000252456 ING5Q8WYH8 240 aa15.21■□□□□ 0.02
CNN1-201ENST00000252456 PSMG2Q969U7 264 aa15.21■□□□□ 0.02
CNN1-201ENST00000252456 MYLPFQ96A32 169 aa15.21■□□□□ 0.02
CNN1-201ENST00000252456 ZNF512Q96ME7 567 aaPredicted RBP15.21■□□□□ 0.02
CNN1-201ENST00000252456 ZNF334Q9HCZ1 680 aaPredicted RBP15.21■□□□□ 0.02
CNN1-201ENST00000252456 HMGXB4Q9UGU5 601 aa15.21■□□□□ 0.02
CNN1-201ENST00000252456 CDH7Q9ULB5 785 aa15.21■□□□□ 0.02
CNN1-201ENST00000252456 COQ4Q9Y3A0 265 aa15.21■□□□□ 0.02
CNN1-201ENST00000252456 MRPS23Q9Y3D9 190 aaKnown RBP15.21■□□□□ 0.02
CNN1-201ENST00000252456 CYP2F1P24903 491 aa15.2■□□□□ 0.02
CNN1-201ENST00000252456 GPR15P49685 360 aa15.2■□□□□ 0.02
CNN1-201ENST00000252456 EPHB3P54753 998 aa15.2■□□□□ 0.02
CNN1-201ENST00000252456 MARSP56192 900 aaKnown RBP15.2■□□□□ 0.02
CNN1-201ENST00000252456 IQCEQ6IPM2 695 aa15.2■□□□□ 0.02
CNN1-201ENST00000252456 DNAJB7Q7Z6W7 309 aaPredicted RBP15.2■□□□□ 0.02
CNN1-201ENST00000252456 TRIM59Q8IWR1 403 aa15.2■□□□□ 0.02
CNN1-201ENST00000252456 ELMOD1Q8N336 334 aa15.2■□□□□ 0.02
CNN1-201ENST00000252456 FBXL13Q8NEE6 735 aa15.2■□□□□ 0.02
CNN1-201ENST00000252456 MYCBPAPQ8TBZ2 947 aa15.2■□□□□ 0.02
CNN1-201ENST00000252456 PCED1BQ96HM7 432 aa15.2■□□□□ 0.02
CNN1-201ENST00000252456 FUBP3Q96I24 572 aaKnown RBP eCLIP15.2■□□□□ 0.02
CNN1-201ENST00000252456 SRRTQ9BXP5 876 aaKnown RBP15.2■□□□□ 0.02
CNN1-201ENST00000252456 SNX25Q9H3E2 840 aa15.2■□□□□ 0.02
CNN1-201ENST00000252456 SMOC2Q9H3U7 446 aa15.2■□□□□ 0.02
CNN1-201ENST00000252456 METTL14Q9HCE5 456 aaKnown RBP15.2■□□□□ 0.02
CNN1-201ENST00000252456 A8MXQ7 604 aa15.19■□□□□ 0.02
CNN1-201ENST00000252456 ANHXE9PGG2 379 aa15.19■□□□□ 0.02
CNN1-201ENST00000252456 STX10O60499 249 aa15.19■□□□□ 0.02
CNN1-201ENST00000252456 HTR4Q13639 388 aa15.19■□□□□ 0.02
CNN1-201ENST00000252456 IRF2BP1Q8IU81 584 aa15.19■□□□□ 0.02
CNN1-201ENST00000252456 STKLD1Q8NE28 680 aa15.19■□□□□ 0.02
CNN1-201ENST00000252456 ST13P5Q8NFI4 369 aaPredicted RBP15.19■□□□□ 0.02
CNN1-201ENST00000252456 GPR152Q8TDT2 470 aa15.19■□□□□ 0.02
CNN1-201ENST00000252456 RSAD2Q8WXG1 361 aa15.19■□□□□ 0.02
CNN1-201ENST00000252456 NIF3L1Q9GZT8 377 aa15.19■□□□□ 0.02
CNN1-201ENST00000252456 KCNK12Q9HB15 430 aa15.19■□□□□ 0.02
CNN1-201ENST00000252456 ASAH2Q9NR71 780 aa15.19■□□□□ 0.02
CNN1-201ENST00000252456 TMEM30AQ9NV96 361 aa15.19■□□□□ 0.02
CNN1-201ENST00000252456 RAB20Q9NX57 234 aa15.19■□□□□ 0.02
CNN1-201ENST00000252456 SORCS3Q9UPU3 1222 aa15.19■□□□□ 0.02
CNN1-201ENST00000252456 ASB3Q9Y575 518 aa15.19■□□□□ 0.02
CNN1-201ENST00000252456 ZFP37Q9Y6Q3 630 aaPredicted RBP15.19■□□□□ 0.02
CNN1-201ENST00000252456 ZNF638Q14966 1978 aaKnown RBP15.19■□□□□ 0.02
CNN1-201ENST00000252456 MICAL2O94851 1124 aa15.18■□□□□ 0.02
CNN1-201ENST00000252456 MYL4P12829 197 aa15.18■□□□□ 0.02
CNN1-201ENST00000252456 P4HA1P13674 534 aa15.18■□□□□ 0.02
CNN1-201ENST00000252456 ALADP13716 330 aa15.18■□□□□ 0.02
CNN1-201ENST00000252456 HMGA1P17096 107 aaKnown RBP15.18■□□□□ 0.02
CNN1-201ENST00000252456 GJA1P17302 382 aa15.18■□□□□ 0.02
CNN1-201ENST00000252456 PTPN1P18031 435 aaKnown RBP15.18■□□□□ 0.02
CNN1-201ENST00000252456 FMO5P49326 533 aa15.18■□□□□ 0.02
CNN1-201ENST00000252456 NLRP12P59046 1061 aa15.18■□□□□ 0.02
CNN1-201ENST00000252456 INCA1Q0VD86 236 aa15.18■□□□□ 0.02
CNN1-201ENST00000252456 CCDC40Q4G0X9 1142 aa15.18■□□□□ 0.02
CNN1-201ENST00000252456 MDH1BQ5I0G3 518 aa15.18■□□□□ 0.02
CNN1-201ENST00000252456 SDHAF4Q5VUM1 108 aa15.18■□□□□ 0.02
CNN1-201ENST00000252456 GAREM2Q75VX8 874 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms