RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 KLHL10Q6JEL2 608 aa26.03■■□□□ 1.76
SDF2L1-201ENST00000248958 SPATA2LQ8IUW3 424 aaPredicted RBP26.03■■□□□ 1.76
SDF2L1-201ENST00000248958 CCDC150Q8NCX0 1101 aa26.03■■□□□ 1.76
SDF2L1-201ENST00000248958 NELFBQ8WX92 580 aa26.03■■□□□ 1.76
SDF2L1-201ENST00000248958 PSMG2Q969U7 264 aa26.03■■□□□ 1.76
SDF2L1-201ENST00000248958 EEF2KMTQ96G04 330 aa26.03■■□□□ 1.76
SDF2L1-201ENST00000248958 MRPL45Q9BRJ2 306 aaKnown RBP26.03■■□□□ 1.76
SDF2L1-201ENST00000248958 DNAJC25Q9H1X3 360 aa26.03■■□□□ 1.76
SDF2L1-201ENST00000248958 TMLHEQ9NVH6 421 aa26.03■■□□□ 1.76
SDF2L1-201ENST00000248958 GDE1Q9NZC3 331 aa26.03■■□□□ 1.76
SDF2L1-201ENST00000248958 COL9A1P20849 921 aa26.02■■□□□ 1.76
SDF2L1-201ENST00000248958 LMO2P25791 158 aa26.02■■□□□ 1.76
SDF2L1-201ENST00000248958 PAK1Q13153 545 aa26.02■■□□□ 1.76
SDF2L1-201ENST00000248958 TDGQ13569 410 aa26.02■■□□□ 1.76
SDF2L1-201ENST00000248958 TMEM31Q5JXX7 168 aa26.02■■□□□ 1.76
SDF2L1-201ENST00000248958 MTSS1LQ765P7 747 aa26.02■■□□□ 1.76
SDF2L1-201ENST00000248958 NPAS3Q8IXF0 933 aa26.02■■□□□ 1.76
SDF2L1-201ENST00000248958 TTC9BQ8N6N2 239 aa26.02■■□□□ 1.76
SDF2L1-201ENST00000248958 FAM200AQ8TCP9 573 aa26.02■■□□□ 1.76
SDF2L1-201ENST00000248958 ARMCX3Q9UH62 379 aaPredicted RBP26.02■■□□□ 1.76
SDF2L1-201ENST00000248958 ANHXE9PGG2 379 aa26.01■■□□□ 1.75
SDF2L1-201ENST00000248958 ASGR2P07307 311 aa26.01■■□□□ 1.75
SDF2L1-201ENST00000248958 RPL10AP62906 217 aaKnown RBP26.01■■□□□ 1.75
SDF2L1-201ENST00000248958 SIGLEC14Q08ET2 396 aa26.01■■□□□ 1.75
SDF2L1-201ENST00000248958 SLC5A9Q2M3M2 681 aa26.01■■□□□ 1.75
SDF2L1-201ENST00000248958 TTI2Q6NXR4 508 aa26.01■■□□□ 1.75
SDF2L1-201ENST00000248958 FRMD5Q7Z6J6 570 aa26.01■■□□□ 1.75
SDF2L1-201ENST00000248958 DNAJB7Q7Z6W7 309 aaPredicted RBP26.01■■□□□ 1.75
SDF2L1-201ENST00000248958 FAXDC2Q96IV6 333 aa26.01■■□□□ 1.75
SDF2L1-201ENST00000248958 PI4K2AQ9BTU6 479 aa26.01■■□□□ 1.75
SDF2L1-201ENST00000248958 GPR88Q9GZN0 384 aa26.01■■□□□ 1.75
SDF2L1-201ENST00000248958 NUP62CLQ9H1M0 184 aa26.01■■□□□ 1.75
SDF2L1-201ENST00000248958 MMRN2Q9H8L6 949 aa26.01■■□□□ 1.75
SDF2L1-201ENST00000248958 MAGEC2Q9UBF1 373 aaPredicted RBP26.01■■□□□ 1.75
SDF2L1-201ENST00000248958 CTNND2Q9UQB3 1225 aa26.01■■□□□ 1.75
SDF2L1-201ENST00000248958 MYBPHLA2RUH7 354 aa26■■□□□ 1.75
SDF2L1-201ENST00000248958 A8MXQ7 604 aa26■■□□□ 1.75
SDF2L1-201ENST00000248958 PDGFRBP09619 1106 aa26■■□□□ 1.75
SDF2L1-201ENST00000248958 MYL4P12829 197 aa26■■□□□ 1.75
SDF2L1-201ENST00000248958 MXI1P50539 228 aa26■■□□□ 1.75
SDF2L1-201ENST00000248958 TAF12Q16514 161 aa26■■□□□ 1.75
SDF2L1-201ENST00000248958 HS6ST3Q8IZP7 471 aa26■■□□□ 1.75
SDF2L1-201ENST00000248958 DUSP9Q99956 384 aaKnown RBP26■■□□□ 1.75
SDF2L1-201ENST00000248958 LRRC3Q9BY71 257 aa26■■□□□ 1.75
SDF2L1-201ENST00000248958 HCRTO43612 131 aa25.99■■□□□ 1.75
SDF2L1-201ENST00000248958 SOAT2O75908 522 aa25.99■■□□□ 1.75
SDF2L1-201ENST00000248958 FGFR1OPO95684 399 aaKnown RBP25.99■■□□□ 1.75
SDF2L1-201ENST00000248958 GNA14O95837 355 aa25.99■■□□□ 1.75
SDF2L1-201ENST00000248958 ATF6P18850 670 aa25.99■■□□□ 1.75
SDF2L1-201ENST00000248958 MAGEA11P43364 429 aa25.99■■□□□ 1.75
SDF2L1-201ENST00000248958 DCAF17Q5H9S7 520 aaPredicted RBP25.99■■□□□ 1.75
SDF2L1-201ENST00000248958 TCERG1LQ5VWI1 586 aa25.99■■□□□ 1.75
SDF2L1-201ENST00000248958 TRIM67Q6ZTA4 783 aa25.99■■□□□ 1.75
SDF2L1-201ENST00000248958 FBXL13Q8NEE6 735 aa25.99■■□□□ 1.75
SDF2L1-201ENST00000248958 MYCBPAPQ8TBZ2 947 aa25.99■■□□□ 1.75
SDF2L1-201ENST00000248958 TAS1R2Q8TE23 839 aa25.99■■□□□ 1.75
SDF2L1-201ENST00000248958 TNIP3Q96KP6 325 aa25.99■■□□□ 1.75
SDF2L1-201ENST00000248958 CRTAC1Q9NQ79 661 aa25.99■■□□□ 1.75
SDF2L1-201ENST00000248958 PRR33A8MZF0 331 aa25.98■■□□□ 1.75
SDF2L1-201ENST00000248958 ATP2C2O75185 946 aa25.98■■□□□ 1.75
SDF2L1-201ENST00000248958 TRIM21P19474 475 aaKnown RBP25.98■■□□□ 1.75
SDF2L1-201ENST00000248958 PSMC1P62191 440 aaKnown RBP25.98■■□□□ 1.75
SDF2L1-201ENST00000248958 NOP14P78316 857 aaKnown RBP25.98■■□□□ 1.75
SDF2L1-201ENST00000248958 HTR4Q13639 388 aa25.98■■□□□ 1.75
SDF2L1-201ENST00000248958 CCDC40Q4G0X9 1142 aa25.98■■□□□ 1.75
SDF2L1-201ENST00000248958 VSTM1Q6UX27 236 aa25.98■■□□□ 1.75
SDF2L1-201ENST00000248958 TMC8Q8IU68 726 aa25.98■■□□□ 1.75
SDF2L1-201ENST00000248958 MLKLQ8NB16 471 aa25.98■■□□□ 1.75
SDF2L1-201ENST00000248958 ING5Q8WYH8 240 aa25.98■■□□□ 1.75
SDF2L1-201ENST00000248958 MYLPFQ96A32 169 aa25.98■■□□□ 1.75
SDF2L1-201ENST00000248958 CEP295NLQ96MC4 621 aa25.98■■□□□ 1.75
SDF2L1-201ENST00000248958 LPIN3Q9BQK8 851 aa25.98■■□□□ 1.75
SDF2L1-201ENST00000248958 SMYD3Q9H7B4 428 aa25.98■■□□□ 1.75
SDF2L1-201ENST00000248958 CYP3A43Q9HB55 503 aa25.98■■□□□ 1.75
SDF2L1-201ENST00000248958 RAB20Q9NX57 234 aa25.98■■□□□ 1.75
SDF2L1-201ENST00000248958 DUSP12Q9UNI6 340 aa25.98■■□□□ 1.75
SDF2L1-201ENST00000248958 PTPRDP23468 1912 aa25.98■■□□□ 1.75
SDF2L1-201ENST00000248958 CSH1P0DML2 217 aa25.97■■□□□ 1.75
SDF2L1-201ENST00000248958 CSH2P0DML3 217 aa25.97■■□□□ 1.75
SDF2L1-201ENST00000248958 CEBPBP17676 345 aa25.97■■□□□ 1.75
SDF2L1-201ENST00000248958 PTPN1P18031 435 aaKnown RBP25.97■■□□□ 1.75
SDF2L1-201ENST00000248958 CYP2F1P24903 491 aa25.97■■□□□ 1.75
SDF2L1-201ENST00000248958 CCR2P41597 374 aa25.97■■□□□ 1.75
SDF2L1-201ENST00000248958 UNC93AQ86WB7 457 aa25.97■■□□□ 1.75
SDF2L1-201ENST00000248958 SLC44A3Q8N4M1 653 aa25.97■■□□□ 1.75
SDF2L1-201ENST00000248958 TCEAL4Q96EI5 215 aa25.97■■□□□ 1.75
SDF2L1-201ENST00000248958 MCRS1Q96EZ8 462 aa25.97■■□□□ 1.75
SDF2L1-201ENST00000248958 C11orf16Q9NQ32 467 aa25.97■■□□□ 1.75
SDF2L1-201ENST00000248958 RWDD2AQ9UIY3 292 aa25.97■■□□□ 1.75
SDF2L1-201ENST00000248958 MOSPD3O75425 235 aa25.96■■□□□ 1.75
SDF2L1-201ENST00000248958 CDC25CP30307 473 aa25.96■■□□□ 1.75
SDF2L1-201ENST00000248958 CDH8P55286 799 aa25.96■■□□□ 1.75
SDF2L1-201ENST00000248958 STX17P56962 302 aa25.96■■□□□ 1.75
SDF2L1-201ENST00000248958 CYP27A1Q02318 531 aa25.96■■□□□ 1.75
SDF2L1-201ENST00000248958 SPOPLQ6IQ16 392 aa25.96■■□□□ 1.75
SDF2L1-201ENST00000248958 SCARA5Q6ZMJ2 495 aa25.96■■□□□ 1.75
SDF2L1-201ENST00000248958 BMP8AQ7Z5Y6 402 aa25.96■■□□□ 1.75
SDF2L1-201ENST00000248958 B3GALNT2Q8NCR0 500 aa25.96■■□□□ 1.75
SDF2L1-201ENST00000248958 GIPC2Q8TF65 315 aa25.96■■□□□ 1.75
SDF2L1-201ENST00000248958 SLC35C1Q96A29 364 aa25.96■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms