RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 ABHD2P08910 425 aa17.06■□□□□ 0.32
UBE3D-201ENST00000237186 CD19P15391 556 aa17.06■□□□□ 0.32
UBE3D-201ENST00000237186 ATP5DP30049 168 aa17.06■□□□□ 0.32
UBE3D-201ENST00000237186 GABRB2P47870 512 aa17.06■□□□□ 0.32
UBE3D-201ENST00000237186 CCNA1P78396 465 aa17.06■□□□□ 0.32
UBE3D-201ENST00000237186 CCDC142Q17RM4 750 aa17.06■□□□□ 0.32
UBE3D-201ENST00000237186 ZNF467Q7Z7K2 595 aaPredicted RBP17.06■□□□□ 0.32
UBE3D-201ENST00000237186 PNMA8AQ86V59 439 aaPredicted RBP17.06■□□□□ 0.32
UBE3D-201ENST00000237186 SLC4A11Q8NBS3 891 aa17.06■□□□□ 0.32
UBE3D-201ENST00000237186 GPRC5AQ8NFJ5 357 aa17.06■□□□□ 0.32
UBE3D-201ENST00000237186 FDXACB1Q9BRP7 624 aaPredicted RBP17.06■□□□□ 0.32
UBE3D-201ENST00000237186 SDCBP2Q9H190 292 aa17.06■□□□□ 0.32
UBE3D-201ENST00000237186 SLC45A1Q9Y2W3 748 aa17.06■□□□□ 0.32
UBE3D-201ENST00000237186 C3orf70A6NLC5 250 aaPredicted RBP17.05■□□□□ 0.32
UBE3D-201ENST00000237186 SMIM23A6NLE4 172 aa17.05■□□□□ 0.32
UBE3D-201ENST00000237186 DNALI1O14645 258 aaPredicted RBP17.05■□□□□ 0.32
UBE3D-201ENST00000237186 NDC80O14777 642 aa17.05■□□□□ 0.32
UBE3D-201ENST00000237186 ITGAVP06756 1048 aa17.05■□□□□ 0.32
UBE3D-201ENST00000237186 KRT19P08727 400 aa17.05■□□□□ 0.32
UBE3D-201ENST00000237186 KRT7P08729 469 aa17.05■□□□□ 0.32
UBE3D-201ENST00000237186 SLCO1A2P46721 670 aa17.05■□□□□ 0.32
UBE3D-201ENST00000237186 VCPP55072 806 aaKnown RBP17.05■□□□□ 0.32
UBE3D-201ENST00000237186 SLC25A11Q02978 314 aaKnown RBP17.05■□□□□ 0.32
UBE3D-201ENST00000237186 PTPN11Q06124 597 aaPredicted RBP17.05■□□□□ 0.32
UBE3D-201ENST00000237186 QPCTQ16769 361 aa17.05■□□□□ 0.32
UBE3D-201ENST00000237186 LONRF1Q17RB8 773 aa17.05■□□□□ 0.32
UBE3D-201ENST00000237186 CYP4A22Q5TCH4 519 aa17.05■□□□□ 0.32
UBE3D-201ENST00000237186 TXNRD3NBQ6F5E7 133 aa17.05■□□□□ 0.32
UBE3D-201ENST00000237186 JADE1Q6IE81 842 aa17.05■□□□□ 0.32
UBE3D-201ENST00000237186 GSTA5Q7RTV2 222 aa17.05■□□□□ 0.32
UBE3D-201ENST00000237186 NT5DC4Q86YG4 428 aa17.05■□□□□ 0.32
UBE3D-201ENST00000237186 OTUD6BQ8N6M0 293 aa17.05■□□□□ 0.32
UBE3D-201ENST00000237186 FAM118BQ9BPY3 351 aa17.05■□□□□ 0.32
UBE3D-201ENST00000237186 KATNBL1Q9H079 304 aa17.05■□□□□ 0.32
UBE3D-201ENST00000237186 INTS9Q9NV88 658 aaKnown RBP17.05■□□□□ 0.32
UBE3D-201ENST00000237186 LGALS13Q9UHV8 139 aa17.05■□□□□ 0.32
UBE3D-201ENST00000237186 SCN4AP35499 1836 aa17.05■□□□□ 0.32
UBE3D-201ENST00000237186 LRCH4O75427 683 aa17.05■□□□□ 0.32
UBE3D-201ENST00000237186 ITGB3P05106 788 aa17.05■□□□□ 0.32
UBE3D-201ENST00000237186 P4HA1P13674 534 aa17.05■□□□□ 0.32
UBE3D-201ENST00000237186 ATF7P17544 494 aaPredicted RBP17.05■□□□□ 0.32
UBE3D-201ENST00000237186 PSMA2P25787 234 aa17.05■□□□□ 0.32
UBE3D-201ENST00000237186 CDH8P55286 799 aa17.05■□□□□ 0.32
UBE3D-201ENST00000237186 IGBP1P78318 339 aa17.05■□□□□ 0.32
UBE3D-201ENST00000237186 STAT4Q14765 748 aa17.05■□□□□ 0.32
UBE3D-201ENST00000237186 ACAP1Q15027 740 aa17.05■□□□□ 0.32
UBE3D-201ENST00000237186 CNGA2Q16280 664 aa17.05■□□□□ 0.32
UBE3D-201ENST00000237186 P3H1Q32P28 736 aa17.05■□□□□ 0.32
UBE3D-201ENST00000237186 SLC10A6Q3KNW5 377 aa17.05■□□□□ 0.32
UBE3D-201ENST00000237186 KAZNQ674X7 775 aa17.05■□□□□ 0.32
UBE3D-201ENST00000237186 XYLT1Q86Y38 959 aa17.05■□□□□ 0.32
UBE3D-201ENST00000237186 ARFGAP1Q8N6T3 406 aa17.05■□□□□ 0.32
UBE3D-201ENST00000237186 SLC35B2Q8TB61 432 aa17.05■□□□□ 0.32
UBE3D-201ENST00000237186 TMEM176AQ96HP8 235 aa17.05■□□□□ 0.32
UBE3D-201ENST00000237186 SEC16BQ96JE7 1060 aa17.05■□□□□ 0.32
UBE3D-201ENST00000237186 SELENOSQ9BQE4 189 aa17.05■□□□□ 0.32
UBE3D-201ENST00000237186 C16orf70Q9BSU1 422 aa17.05■□□□□ 0.32
UBE3D-201ENST00000237186 KLHL11Q9NVR0 708 aa17.05■□□□□ 0.32
UBE3D-201ENST00000237186 ZNF148Q9UQR1 794 aa17.05■□□□□ 0.32
UBE3D-201ENST00000237186 C2CD2Q9Y426 696 aa17.05■□□□□ 0.32
UBE3D-201ENST00000237186 HMGCRP04035 888 aa17.04■□□□□ 0.32
UBE3D-201ENST00000237186 CYP2C8P10632 490 aa17.04■□□□□ 0.32
UBE3D-201ENST00000237186 ARF4P18085 180 aaPredicted RBP17.04■□□□□ 0.32
UBE3D-201ENST00000237186 RAP1GAPP47736 663 aa17.04■□□□□ 0.32
UBE3D-201ENST00000237186 VPS41P49754 854 aa17.04■□□□□ 0.32
UBE3D-201ENST00000237186 PSMC1P62191 440 aaKnown RBP17.04■□□□□ 0.32
UBE3D-201ENST00000237186 GKAP1Q5VSY0 366 aaPredicted RBP17.04■□□□□ 0.32
UBE3D-201ENST00000237186 TTC39CQ8N584 583 aa17.04■□□□□ 0.32
UBE3D-201ENST00000237186 ARHGEF2Q92974 986 aaKnown RBP17.04■□□□□ 0.32
UBE3D-201ENST00000237186 MCRS1Q96EZ8 462 aa17.04■□□□□ 0.32
UBE3D-201ENST00000237186 ELOVL4Q9GZR5 314 aa17.04■□□□□ 0.32
UBE3D-201ENST00000237186 CLEC11AQ9Y240 323 aa17.04■□□□□ 0.32
UBE3D-201ENST00000237186 A0A1B0GUA9 196 aa17.03■□□□□ 0.32
UBE3D-201ENST00000237186 LRRD1A4D1F6 860 aa17.03■□□□□ 0.32
UBE3D-201ENST00000237186 STRNO43815 780 aa17.03■□□□□ 0.32
UBE3D-201ENST00000237186 FSBPO95073 299 aa17.03■□□□□ 0.32
UBE3D-201ENST00000237186 VDRP11473 427 aa17.03■□□□□ 0.32
UBE3D-201ENST00000237186 HOXD8P13378 290 aaPredicted RBP17.03■□□□□ 0.32
UBE3D-201ENST00000237186 ADORA2AP29274 412 aa17.03■□□□□ 0.32
UBE3D-201ENST00000237186 INCA1Q0VD86 236 aa17.03■□□□□ 0.32
UBE3D-201ENST00000237186 MORF4L2Q15014 288 aa17.03■□□□□ 0.32
UBE3D-201ENST00000237186 HADHQ16836 314 aaKnown RBP17.03■□□□□ 0.32
UBE3D-201ENST00000237186 ZFYVE27Q5T4F4 411 aa17.03■□□□□ 0.32
UBE3D-201ENST00000237186 MTHFD1LQ6UB35 978 aa17.03■□□□□ 0.32
UBE3D-201ENST00000237186 PIGWQ7Z7B1 504 aa17.03■□□□□ 0.32
UBE3D-201ENST00000237186 CPLX4Q7Z7G2 160 aa17.03■□□□□ 0.32
UBE3D-201ENST00000237186 KIAA0319LQ8IZA0 1049 aa17.03■□□□□ 0.32
UBE3D-201ENST00000237186 TTC13Q8NBP0 860 aa17.03■□□□□ 0.32
UBE3D-201ENST00000237186 JOSD2Q8TAC2 188 aa17.03■□□□□ 0.32
UBE3D-201ENST00000237186 AFG1LQ8WV93 481 aa17.03■□□□□ 0.32
UBE3D-201ENST00000237186 TWNKQ96RR1 684 aa17.03■□□□□ 0.32
UBE3D-201ENST00000237186 CPXM1Q96SM3 734 aa17.03■□□□□ 0.32
UBE3D-201ENST00000237186 SMYD3Q9H7B4 428 aa17.03■□□□□ 0.32
UBE3D-201ENST00000237186 EURLQ9NYK6 297 aa17.03■□□□□ 0.32
UBE3D-201ENST00000237186 ITGA11Q9UKX5 1188 aa17.03■□□□□ 0.32
UBE3D-201ENST00000237186 KIAA1257Q9ULG3 409 aa17.03■□□□□ 0.32
UBE3D-201ENST00000237186 TPX2Q9ULW0 747 aaKnown RBP17.03■□□□□ 0.32
UBE3D-201ENST00000237186 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.03■□□□□ 0.32
UBE3D-201ENST00000237186 CDH16O75309 829 aa17.03■□□□□ 0.32
UBE3D-201ENST00000237186 IL1R2P27930 398 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms