RNA–Protein interactions for RNA: ENST00000225726.9

CCDC47-201, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC47, Length 3,466 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-201ENST00000225726 TNFRSF8P28908 595 aa15.74■□□□□ 0.11
CCDC47-201ENST00000225726 HTRA3P83110 453 aa15.74■□□□□ 0.11
CCDC47-201ENST00000225726 PPP2R5EQ16537 467 aa15.74■□□□□ 0.11
CCDC47-201ENST00000225726 OR6B3Q8NGW1 331 aa15.74■□□□□ 0.11
CCDC47-201ENST00000225726 C18orf8Q96DM3 657 aa15.74■□□□□ 0.11
CCDC47-201ENST00000225726 MCEEQ96PE7 176 aa15.74■□□□□ 0.11
CCDC47-201ENST00000225726 SLITRK6Q9H5Y7 841 aa15.74■□□□□ 0.11
CCDC47-201ENST00000225726 PTCH2Q9Y6C5 1203 aa15.74■□□□□ 0.11
CCDC47-201ENST00000225726 GOLGA6L10A0A0M3HER8 536 aa15.74■□□□□ 0.11
CCDC47-201ENST00000225726 PYGMP11217 842 aa15.74■□□□□ 0.11
CCDC47-201ENST00000225726 MLH1P40692 756 aa15.74■□□□□ 0.11
CCDC47-201ENST00000225726 SLC7A5Q01650 507 aa15.74■□□□□ 0.11
CCDC47-201ENST00000225726 ZNF268Q14587 947 aaPredicted RBP15.74■□□□□ 0.11
CCDC47-201ENST00000225726 GOLGA7BQ2TAP0 167 aa15.74■□□□□ 0.11
CCDC47-201ENST00000225726 ZNF618Q5T7W0 954 aa15.74■□□□□ 0.11
CCDC47-201ENST00000225726 DCUN1D2Q6PH85 259 aa15.74■□□□□ 0.11
CCDC47-201ENST00000225726 CCNI2Q6ZMN8 369 aaPredicted RBP15.74■□□□□ 0.11
CCDC47-201ENST00000225726 CPXM1Q96SM3 734 aa15.74■□□□□ 0.11
CCDC47-201ENST00000225726 TSPAN16Q9UKR8 245 aa15.74■□□□□ 0.11
CCDC47-201ENST00000225726 MEIS3P2A8K0S8 358 aa15.74■□□□□ 0.11
CCDC47-201ENST00000225726 MGEA5O60502 916 aa15.74■□□□□ 0.11
CCDC47-201ENST00000225726 RPL7AP62424 266 aaKnown RBP15.74■□□□□ 0.11
CCDC47-201ENST00000225726 PDCLQ13371 301 aa15.74■□□□□ 0.11
CCDC47-201ENST00000225726 ACOT1Q86TX2 421 aa15.74■□□□□ 0.11
CCDC47-201ENST00000225726 XYLT1Q86Y38 959 aa15.74■□□□□ 0.11
CCDC47-201ENST00000225726 TOP6BLQ8N6T0 577 aa15.74■□□□□ 0.11
CCDC47-201ENST00000225726 APPL2Q8NEU8 664 aa15.74■□□□□ 0.11
CCDC47-201ENST00000225726 KBTBD7Q8WVZ9 684 aa15.74■□□□□ 0.11
CCDC47-201ENST00000225726 SNX25Q9H3E2 840 aa15.74■□□□□ 0.11
CCDC47-201ENST00000225726 SYNCQ9H7C4 482 aa15.74■□□□□ 0.11
CCDC47-201ENST00000225726 PHF24Q9UPV7 400 aa15.74■□□□□ 0.11
CCDC47-201ENST00000225726 NME7Q9Y5B8 376 aa15.74■□□□□ 0.11
CCDC47-201ENST00000225726 ZMYND10O75800 440 aa15.73■□□□□ 0.11
CCDC47-201ENST00000225726 THP07101 528 aa15.73■□□□□ 0.11
CCDC47-201ENST00000225726 PSMC1P62191 440 aaKnown RBP15.73■□□□□ 0.11
CCDC47-201ENST00000225726 AADACL2Q6P093 401 aa15.73■□□□□ 0.11
CCDC47-201ENST00000225726 AGMOQ6ZNB7 445 aa15.73■□□□□ 0.11
CCDC47-201ENST00000225726 DPH6Q7L8W6 267 aa15.73■□□□□ 0.11
CCDC47-201ENST00000225726 RHOT1Q8IXI2 618 aa15.73■□□□□ 0.11
CCDC47-201ENST00000225726 LPPQ93052 612 aa15.73■□□□□ 0.11
CCDC47-201ENST00000225726 GAD1Q99259 594 aa15.73■□□□□ 0.11
CCDC47-201ENST00000225726 STARD7Q9NQZ5 370 aa15.73■□□□□ 0.11
CCDC47-201ENST00000225726 SIGLEC16A6NMB1 481 aa15.73■□□□□ 0.11
CCDC47-201ENST00000225726 A8MXQ7 604 aa15.73■□□□□ 0.11
CCDC47-201ENST00000225726 RAD51CO43502 376 aa15.73■□□□□ 0.11
CCDC47-201ENST00000225726 ERBB2P04626 1255 aa15.73■□□□□ 0.11
CCDC47-201ENST00000225726 FAM163BP0C2L3 166 aa15.73■□□□□ 0.11
CCDC47-201ENST00000225726 SKIP12755 728 aa15.73■□□□□ 0.11
CCDC47-201ENST00000225726 LILRA4P59901 499 aa15.73■□□□□ 0.11
CCDC47-201ENST00000225726 MRPS25P82663 173 aaKnown RBP15.73■□□□□ 0.11
CCDC47-201ENST00000225726 ARHGAP17Q68EM7 881 aa15.73■□□□□ 0.11
CCDC47-201ENST00000225726 GSTCDQ8NEC7 633 aa15.73■□□□□ 0.11
CCDC47-201ENST00000225726 UBA3Q8TBC4 463 aa15.73■□□□□ 0.11
CCDC47-201ENST00000225726 MIS12Q9H081 205 aa15.73■□□□□ 0.11
CCDC47-201ENST00000225726 L1RE1Q9UN81 338 aa15.73■□□□□ 0.11
CCDC47-201ENST00000225726 ARL5CA6NH57 179 aa15.73■□□□□ 0.11
CCDC47-201ENST00000225726 HUS1O60921 280 aa15.73■□□□□ 0.11
CCDC47-201ENST00000225726 HEXIM1O94992 359 aaKnown RBP15.73■□□□□ 0.11
CCDC47-201ENST00000225726 SETSIPP0DME0 302 aa15.73■□□□□ 0.11
CCDC47-201ENST00000225726 CKBP12277 381 aa15.73■□□□□ 0.11
CCDC47-201ENST00000225726 PIGHQ14442 188 aaPredicted RBP15.73■□□□□ 0.11
CCDC47-201ENST00000225726 PPP1R26Q5T8A7 1209 aaPredicted RBP15.73■□□□□ 0.11
CCDC47-201ENST00000225726 NIPA2Q8N8Q9 360 aa15.73■□□□□ 0.11
CCDC47-201ENST00000225726 C12orf29Q8N999 325 aa15.73■□□□□ 0.11
CCDC47-201ENST00000225726 DDX27Q96GQ7 796 aaKnown RBP15.73■□□□□ 0.11
CCDC47-201ENST00000225726 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.73■□□□□ 0.11
CCDC47-201ENST00000225726 TRPV6Q9H1D0 765 aa15.73■□□□□ 0.11
CCDC47-201ENST00000225726 GDF3Q9NR23 364 aa15.73■□□□□ 0.11
CCDC47-201ENST00000225726 KBTBD13C9JR72 458 aa15.72■□□□□ 0.11
CCDC47-201ENST00000225726 SART1O43290 800 aaKnown RBP15.72■□□□□ 0.11
CCDC47-201ENST00000225726 WARSP23381 471 aaKnown RBP15.72■□□□□ 0.11
CCDC47-201ENST00000225726 GNL1P36915 607 aaPredicted RBP15.72■□□□□ 0.11
CCDC47-201ENST00000225726 EP400NLQ6ZTU2 488 aa15.72■□□□□ 0.11
CCDC47-201ENST00000225726 IFT20Q8IY31 132 aa15.72■□□□□ 0.11
CCDC47-201ENST00000225726 CRYBG2Q8N1P7 616 aa15.72■□□□□ 0.11
CCDC47-201ENST00000225726 CCDC26Q8TAB7 109 aa15.72■□□□□ 0.11
CCDC47-201ENST00000225726 PGBD4Q96DM1 585 aa15.72■□□□□ 0.11
CCDC47-201ENST00000225726 DDX47Q9H0S4 455 aaKnown RBP15.72■□□□□ 0.11
CCDC47-201ENST00000225726 TSPYL2Q9H2G4 693 aaPredicted RBP15.72■□□□□ 0.11
CCDC47-201ENST00000225726 TJP2Q9UDY2 1190 aa15.72■□□□□ 0.11
CCDC47-201ENST00000225726 TRIM17Q9Y577 477 aa15.72■□□□□ 0.11
CCDC47-201ENST00000225726 A0A0U1RQF3 1178 aa15.72■□□□□ 0.11
CCDC47-201ENST00000225726 GOLGA8SH3BPF8 625 aa15.72■□□□□ 0.11
CCDC47-201ENST00000225726 PFKMP08237 780 aa15.72■□□□□ 0.11
CCDC47-201ENST00000225726 FGFR1P11362 822 aa15.72■□□□□ 0.11
CCDC47-201ENST00000225726 ZNF252P-AS1Q0IIN9 211 aa15.72■□□□□ 0.11
CCDC47-201ENST00000225726 PKDCCQ504Y2 493 aa15.72■□□□□ 0.11
CCDC47-201ENST00000225726 SLC13A5Q86YT5 568 aaPredicted RBP15.72■□□□□ 0.11
CCDC47-201ENST00000225726 ADGRF2Q8IZF7 708 aa15.72■□□□□ 0.11
CCDC47-201ENST00000225726 MCRS1Q96EZ8 462 aa15.72■□□□□ 0.11
CCDC47-201ENST00000225726 SEZ6LQ9BYH1 1024 aa15.72■□□□□ 0.11
CCDC47-201ENST00000225726 UBN1Q9NPG3 1134 aa15.72■□□□□ 0.11
CCDC47-201ENST00000225726 GLI1P08151 1106 aa15.71■□□□□ 0.11
CCDC47-201ENST00000225726 KRT3P12035 628 aa15.71■□□□□ 0.11
CCDC47-201ENST00000225726 KATNAL2Q8IYT4 538 aa15.71■□□□□ 0.11
CCDC47-201ENST00000225726 ADAM2Q99965 735 aa15.71■□□□□ 0.11
CCDC47-201ENST00000225726 MIOSQ9NXC5 875 aa15.71■□□□□ 0.11
CCDC47-201ENST00000225726 HESX1Q9UBX0 185 aa15.71■□□□□ 0.11
CCDC47-201ENST00000225726 USTQ9Y2C2 406 aa15.71■□□□□ 0.11
CCDC47-201ENST00000225726 ARVCFO00192 962 aa15.71■□□□□ 0.11
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