RNA–Protein interactions for RNA: ENST00000219837.11

KNOP1-201, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KNOP1, Length 6,432 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-201ENST00000219837 VPS72Q15906 364 aa11.55□□□□□ -0.56
KNOP1-201ENST00000219837 HHIPL2Q6UWX4 724 aa11.55□□□□□ -0.56
KNOP1-201ENST00000219837 BLOC1S5Q8TDH9 187 aa11.55□□□□□ -0.56
KNOP1-201ENST00000219837 OLFM3Q96PB7 478 aa11.55□□□□□ -0.56
KNOP1-201ENST00000219837 CHST12Q9NRB3 414 aa11.55□□□□□ -0.56
KNOP1-201ENST00000219837 FAM205CA6NFA0 338 aa11.55□□□□□ -0.56
KNOP1-201ENST00000219837 CNTN1Q12860 1018 aa11.55□□□□□ -0.56
KNOP1-201ENST00000219837 LRRC36Q1X8D7 754 aa11.55□□□□□ -0.56
KNOP1-201ENST00000219837 CCDC33Q8N5R6 958 aa11.55□□□□□ -0.56
KNOP1-201ENST00000219837 RBM15Q96T37 977 aaKnown RBP eCLIP11.55□□□□□ -0.562e-6■□□□□ 9.2
KNOP1-201ENST00000219837 ADGRG1Q9Y653 693 aa11.55□□□□□ -0.56
KNOP1-201ENST00000219837 SPATA31E1Q6ZUB1 1445 aa11.55□□□□□ -0.56
KNOP1-201ENST00000219837 ITSN1Q15811 1721 aa11.55□□□□□ -0.56
KNOP1-201ENST00000219837 LRRC7Q96NW7 1537 aa11.55□□□□□ -0.56
KNOP1-201ENST00000219837 MYMKA6NI61 221 aa11.55□□□□□ -0.56
KNOP1-201ENST00000219837 LRRIQ3A6PVS8 624 aaPredicted RBP11.55□□□□□ -0.56
KNOP1-201ENST00000219837 PTPN7P35236 360 aa11.55□□□□□ -0.56
KNOP1-201ENST00000219837 SPRP35270 261 aaPredicted RBP11.55□□□□□ -0.56
KNOP1-201ENST00000219837 GALCP54803 685 aa11.55□□□□□ -0.56
KNOP1-201ENST00000219837 MAP3K7CLP57077 242 aa11.55□□□□□ -0.56
KNOP1-201ENST00000219837 SFSWAPQ12872 951 aaKnown RBP11.55□□□□□ -0.56
KNOP1-201ENST00000219837 ALFQ53S48 1182 aa11.55□□□□□ -0.56
KNOP1-201ENST00000219837 ANKRD13AQ8IZ07 590 aa11.55□□□□□ -0.56
KNOP1-201ENST00000219837 MIER2Q8N344 545 aa11.55□□□□□ -0.56
KNOP1-201ENST00000219837 FAM151AQ8WW52 585 aa11.55□□□□□ -0.56
KNOP1-201ENST00000219837 FBXO32Q969P5 355 aa11.55□□□□□ -0.56
KNOP1-201ENST00000219837 GOLPH3Q9H4A6 298 aa11.55□□□□□ -0.56
KNOP1-201ENST00000219837 GTF2A1LQ9UNN4 478 aa11.55□□□□□ -0.56
KNOP1-201ENST00000219837 UBE2Q2LH0YL09 131 aa11.55□□□□□ -0.56
KNOP1-201ENST00000219837 EZH2Q15910 746 aaKnown RBP11.55□□□□□ -0.56
KNOP1-201ENST00000219837 E2F4Q16254 413 aa11.55□□□□□ -0.56
KNOP1-201ENST00000219837 CCDC144BQ3MJ40 725 aa11.55□□□□□ -0.56
KNOP1-201ENST00000219837 LVRNQ6Q4G3 990 aa11.55□□□□□ -0.56
KNOP1-201ENST00000219837 TEX9Q8N6V9 391 aa11.55□□□□□ -0.56
KNOP1-201ENST00000219837 KIF2CQ99661 725 aa11.55□□□□□ -0.56
KNOP1-201ENST00000219837 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.55□□□□□ -0.56
KNOP1-201ENST00000219837 RIC8BQ9NVN3 520 aa11.55□□□□□ -0.56
KNOP1-201ENST00000219837 ITIH2P19823 946 aa11.54□□□□□ -0.56
KNOP1-201ENST00000219837 ACTN3Q08043 901 aaPredicted RBP11.54□□□□□ -0.56
KNOP1-201ENST00000219837 C3orf62Q6ZUJ4 267 aa11.54□□□□□ -0.56
KNOP1-201ENST00000219837 PLEKHH3Q7Z736 793 aa11.54□□□□□ -0.56
KNOP1-201ENST00000219837 DEFB128Q7Z7B8 93 aa11.54□□□□□ -0.56
KNOP1-201ENST00000219837 PRPF39Q86UA1 669 aaKnown RBP11.54□□□□□ -0.56
KNOP1-201ENST00000219837 METTL16Q86W50 562 aaKnown RBP11.54□□□□□ -0.56
KNOP1-201ENST00000219837 CERKQ8TCT0 537 aa11.54□□□□□ -0.56
KNOP1-201ENST00000219837 ERLEC1Q96DZ1 483 aa11.54□□□□□ -0.56
KNOP1-201ENST00000219837 DDX28Q9NUL7 540 aaKnown RBP11.54□□□□□ -0.56
KNOP1-201ENST00000219837 GID8Q9NWU2 228 aa11.54□□□□□ -0.56
KNOP1-201ENST00000219837 RUVBL2Q9Y230 463 aaKnown RBP11.54□□□□□ -0.56
KNOP1-201ENST00000219837 MBD5Q9P267 1494 aa11.54□□□□□ -0.56
KNOP1-201ENST00000219837 PWP1Q13610 501 aa11.54□□□□□ -0.56
KNOP1-201ENST00000219837 MTF1Q14872 753 aa11.54□□□□□ -0.56
KNOP1-201ENST00000219837 TMEM132BQ14DG7 1078 aa11.54□□□□□ -0.56
KNOP1-201ENST00000219837 GALNTL6Q49A17 601 aa11.54□□□□□ -0.56
KNOP1-201ENST00000219837 E4F1Q66K89 784 aaPredicted RBP11.54□□□□□ -0.56
KNOP1-201ENST00000219837 LRRC8BQ6P9F7 803 aa11.54□□□□□ -0.56
KNOP1-201ENST00000219837 LINC00523Q86TU6 105 aa11.54□□□□□ -0.56
KNOP1-201ENST00000219837 SCFD2Q8WU76 684 aa11.54□□□□□ -0.56
KNOP1-201ENST00000219837 RUBCNQ92622 972 aa11.54□□□□□ -0.56
KNOP1-201ENST00000219837 SHCBP1LQ9BZQ2 653 aa11.54□□□□□ -0.56
KNOP1-201ENST00000219837 SPACA6W5XKT8 324 aa11.54□□□□□ -0.56
KNOP1-201ENST00000219837 SYNCRIPO60506 623 aaKnown RBP11.54□□□□□ -0.56
KNOP1-201ENST00000219837 CAMK2GQ13555 558 aaPredicted RBP11.54□□□□□ -0.56
KNOP1-201ENST00000219837 CHI3L2Q15782 390 aa11.54□□□□□ -0.56
KNOP1-201ENST00000219837 RABGAP1LQ5R372 815 aa11.54□□□□□ -0.56
KNOP1-201ENST00000219837 GALNT4Q8N4A0 578 aa11.54□□□□□ -0.56
KNOP1-201ENST00000219837 DEFB129Q9H1M3 183 aa11.54□□□□□ -0.56
KNOP1-201ENST00000219837 PNMA8BQ9ULN7 279 aaPredicted RBP11.54□□□□□ -0.56
KNOP1-201ENST00000219837 SMG5Q9UPR3 1016 aaKnown RBP11.54□□□□□ -0.56
KNOP1-201ENST00000219837 DCDC2CA8MYV0 355 aa11.54□□□□□ -0.56
KNOP1-201ENST00000219837 ZNF609O15014 1411 aa11.54□□□□□ -0.56
KNOP1-201ENST00000219837 ATN1P54259 1190 aaPredicted RBP11.54□□□□□ -0.56
KNOP1-201ENST00000219837 PDS5AQ29RF7 1337 aaKnown RBP11.54□□□□□ -0.56
KNOP1-201ENST00000219837 EPC2Q52LR7 807 aa11.54□□□□□ -0.56
KNOP1-201ENST00000219837 TRIM65Q6PJ69 517 aa11.54□□□□□ -0.56
KNOP1-201ENST00000219837 CCDC60Q8IWA6 550 aaPredicted RBP11.54□□□□□ -0.56
KNOP1-201ENST00000219837 ADGRF2Q8IZF7 708 aa11.54□□□□□ -0.56
KNOP1-201ENST00000219837 FEZF2Q8TBJ5 459 aa11.54□□□□□ -0.56
KNOP1-201ENST00000219837 DTX3LQ8TDB6 740 aa11.54□□□□□ -0.56
KNOP1-201ENST00000219837 RSAD1Q9HA92 442 aa11.54□□□□□ -0.56
KNOP1-201ENST00000219837 TRIM10Q9UDY6 481 aa11.54□□□□□ -0.56
KNOP1-201ENST00000219837 CFAP73A6NFT4 308 aa11.54□□□□□ -0.56
KNOP1-201ENST00000219837 TBX3O15119 743 aa11.54□□□□□ -0.56
KNOP1-201ENST00000219837 FOXP2O15409 715 aa11.54□□□□□ -0.56
KNOP1-201ENST00000219837 AP1G2O75843 785 aa11.54□□□□□ -0.56
KNOP1-201ENST00000219837 APOA1P02647 267 aa11.54□□□□□ -0.56
KNOP1-201ENST00000219837 RPS12P25398 132 aaKnown RBP11.54□□□□□ -0.56
KNOP1-201ENST00000219837 S100A5P33763 92 aa11.54□□□□□ -0.56
KNOP1-201ENST00000219837 PCYT1AP49585 367 aa11.54□□□□□ -0.56
KNOP1-201ENST00000219837 KPNA1P52294 538 aaPredicted RBP11.54□□□□□ -0.56
KNOP1-201ENST00000219837 LAYNQ6UX15 382 aa11.54□□□□□ -0.56
KNOP1-201ENST00000219837 OTOAQ7RTW8 1153 aa11.54□□□□□ -0.56
KNOP1-201ENST00000219837 IFNEQ86WN2 208 aa11.54□□□□□ -0.56
KNOP1-201ENST00000219837 ATG4CQ96DT6 458 aa11.54□□□□□ -0.56
KNOP1-201ENST00000219837 CMTM5Q96DZ9 223 aa11.54□□□□□ -0.56
KNOP1-201ENST00000219837 PLA2G12BQ9BX93 195 aa11.54□□□□□ -0.56
KNOP1-201ENST00000219837 RRAGCQ9HB90 399 aa11.54□□□□□ -0.56
KNOP1-201ENST00000219837 KCNH7Q9NS40 1196 aa11.54□□□□□ -0.56
KNOP1-201ENST00000219837 TBX20Q9UMR3 447 aa11.54□□□□□ -0.56
KNOP1-201ENST00000219837 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms