RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 METTL7BQ6UX53 244 aa19.74■□□□□ 0.75
SMPD3-201ENST00000219334 ANO5Q75V66 913 aa19.74■□□□□ 0.75
SMPD3-201ENST00000219334 PRUNE1Q86TP1 453 aa19.74■□□□□ 0.75
SMPD3-201ENST00000219334 ELOA2Q8IYF1 753 aaPredicted RBP19.74■□□□□ 0.75
SMPD3-201ENST00000219334 TRAF3IP3Q9Y228 551 aa19.74■□□□□ 0.75
SMPD3-201ENST00000219334 H3BRB1 525 aa19.74■□□□□ 0.75
SMPD3-201ENST00000219334 PMPCBO75439 489 aa19.74■□□□□ 0.75
SMPD3-201ENST00000219334 EPB42P16452 691 aa19.74■□□□□ 0.75
SMPD3-201ENST00000219334 MZF1P28698 734 aaPredicted RBP19.74■□□□□ 0.75
SMPD3-201ENST00000219334 HERVK_113P62684 666 aa19.74■□□□□ 0.75
SMPD3-201ENST00000219334 VPS37AQ8NEZ2 397 aa19.74■□□□□ 0.75
SMPD3-201ENST00000219334 DNERQ8NFT8 737 aa19.74■□□□□ 0.75
SMPD3-201ENST00000219334 RUBCNQ92622 972 aa19.74■□□□□ 0.75
SMPD3-201ENST00000219334 TRIM51Q9BSJ1 452 aa19.74■□□□□ 0.75
SMPD3-201ENST00000219334 TUT1Q9H6E5 874 aaKnown RBP19.74■□□□□ 0.75
SMPD3-201ENST00000219334 GPRC5CQ9NQ84 441 aa19.74■□□□□ 0.75
SMPD3-201ENST00000219334 KANSL3Q9P2N6 904 aa19.74■□□□□ 0.75
SMPD3-201ENST00000219334 SLC37A4O43826 429 aa19.74■□□□□ 0.75
SMPD3-201ENST00000219334 ARP10275 920 aa19.74■□□□□ 0.75
SMPD3-201ENST00000219334 LHX1P48742 406 aa19.74■□□□□ 0.75
SMPD3-201ENST00000219334 GEMP55040 296 aa19.74■□□□□ 0.75
SMPD3-201ENST00000219334 NFE2Q16621 373 aaPredicted RBP19.74■□□□□ 0.75
SMPD3-201ENST00000219334 MTG1Q9BT17 334 aaPredicted RBP19.74■□□□□ 0.75
SMPD3-201ENST00000219334 ATMINO43313 823 aaPredicted RBP19.73■□□□□ 0.75
SMPD3-201ENST00000219334 STRNO43815 780 aa19.73■□□□□ 0.75
SMPD3-201ENST00000219334 PFDN1O60925 122 aa19.73■□□□□ 0.75
SMPD3-201ENST00000219334 INPP5AQ14642 412 aa19.73■□□□□ 0.75
SMPD3-201ENST00000219334 ZNF669Q96BR6 464 aaPredicted RBP19.73■□□□□ 0.75
SMPD3-201ENST00000219334 MTMR12Q9C0I1 747 aa19.73■□□□□ 0.75
SMPD3-201ENST00000219334 BRD8Q9H0E9 1235 aa19.73■□□□□ 0.75
SMPD3-201ENST00000219334 ETNK1Q9HBU6 452 aa19.73■□□□□ 0.75
SMPD3-201ENST00000219334 PXMP2Q9NR77 195 aa19.73■□□□□ 0.75
SMPD3-201ENST00000219334 PCMTD2Q9NV79 361 aa19.73■□□□□ 0.75
SMPD3-201ENST00000219334 MRFAP1Q9Y605 127 aa19.73■□□□□ 0.75
SMPD3-201ENST00000219334 ALG6Q9Y672 507 aa19.73■□□□□ 0.75
SMPD3-201ENST00000219334 H2AFYO75367 372 aaKnown RBP19.73■□□□□ 0.75
SMPD3-201ENST00000219334 AGTP01019 485 aa19.73■□□□□ 0.75
SMPD3-201ENST00000219334 KRT16P08779 473 aa19.73■□□□□ 0.75
SMPD3-201ENST00000219334 PCNX4Q63HM2 1172 aa19.73■□□□□ 0.75
SMPD3-201ENST00000219334 DDI1Q8WTU0 396 aa19.73■□□□□ 0.75
SMPD3-201ENST00000219334 PRPF18Q99633 342 aaKnown RBP19.73■□□□□ 0.75
SMPD3-201ENST00000219334 EMILIN2Q9BXX0 1053 aa19.73■□□□□ 0.75
SMPD3-201ENST00000219334 AURKCQ9UQB9 309 aa19.73■□□□□ 0.75
SMPD3-201ENST00000219334 LRRIQ3A6PVS8 624 aaPredicted RBP19.73■□□□□ 0.75
SMPD3-201ENST00000219334 CENPCQ03188 943 aa19.73■□□□□ 0.75
SMPD3-201ENST00000219334 EFL1Q7Z2Z2 1120 aaKnown RBP19.73■□□□□ 0.75
SMPD3-201ENST00000219334 RIN2Q8WYP3 895 aaPredicted RBP19.73■□□□□ 0.75
SMPD3-201ENST00000219334 CARNMT1Q8N4J0 409 aa19.73■□□□□ 0.75
SMPD3-201ENST00000219334 LRRC1Q9BTT6 524 aa19.73■□□□□ 0.75
SMPD3-201ENST00000219334 ADAM33Q9BZ11 813 aa19.73■□□□□ 0.75
SMPD3-201ENST00000219334 MAP3K13O43283 966 aa19.72■□□□□ 0.75
SMPD3-201ENST00000219334 SYNCRIPO60506 623 aaKnown RBP19.72■□□□□ 0.75
SMPD3-201ENST00000219334 DDHD2O94830 711 aa19.72■□□□□ 0.75
SMPD3-201ENST00000219334 MS4A14Q96JA4 679 aa19.72■□□□□ 0.75
SMPD3-201ENST00000219334 RIC8BQ9NVN3 520 aa19.72■□□□□ 0.75
SMPD3-201ENST00000219334 OXCT1P55809 520 aa19.72■□□□□ 0.75
SMPD3-201ENST00000219334 ITIH5Q86UX2 942 aa19.72■□□□□ 0.75
SMPD3-201ENST00000219334 ADAM21Q9UKJ8 722 aa19.72■□□□□ 0.75
SMPD3-201ENST00000219334 CDC42BPAQ5VT25 1732 aa19.72■□□□□ 0.75
SMPD3-201ENST00000219334 NPTX2P47972 431 aa19.72■□□□□ 0.75
SMPD3-201ENST00000219334 PHKG1Q16816 387 aa19.72■□□□□ 0.75
SMPD3-201ENST00000219334 FRMD8Q9BZ67 464 aaPredicted RBP19.72■□□□□ 0.75
SMPD3-201ENST00000219334 A0A1W2PQJ5 194 aa19.72■□□□□ 0.75
SMPD3-201ENST00000219334 SNRPAP09012 282 aaKnown RBP19.72■□□□□ 0.75
SMPD3-201ENST00000219334 VCLP18206 1134 aa19.72■□□□□ 0.75
SMPD3-201ENST00000219334 PTK7Q13308 1070 aa19.72■□□□□ 0.75
SMPD3-201ENST00000219334 AARS2Q5JTZ9 985 aaKnown RBP19.72■□□□□ 0.75
SMPD3-201ENST00000219334 RTFDC1Q9BY42 306 aaPredicted RBP19.72■□□□□ 0.75
SMPD3-201ENST00000219334 MRGBPQ9NV56 204 aa19.72■□□□□ 0.75
SMPD3-201ENST00000219334 PQBP1O60828 265 aaKnown RBP19.72■□□□□ 0.75
SMPD3-201ENST00000219334 BCAT1P54687 386 aa19.72■□□□□ 0.75
SMPD3-201ENST00000219334 ALDH18A1P54886 795 aaKnown RBP19.72■□□□□ 0.75
SMPD3-201ENST00000219334 E4F1Q66K89 784 aaPredicted RBP19.72■□□□□ 0.75
SMPD3-201ENST00000219334 ACAD10Q6JQN1 1059 aa19.72■□□□□ 0.75
SMPD3-201ENST00000219334 BLOC1S5Q8TDH9 187 aa19.72■□□□□ 0.75
SMPD3-201ENST00000219334 ARHGAP26Q9UNA1 814 aa19.72■□□□□ 0.75
SMPD3-201ENST00000219334 ZDHHC9Q9Y397 364 aa19.72■□□□□ 0.75
SMPD3-201ENST00000219334 SETBP1Q9Y6X0 1596 aa19.72■□□□□ 0.75
SMPD3-201ENST00000219334 KRT87PA6NCN2 255 aa19.71■□□□□ 0.75
SMPD3-201ENST00000219334 DDTLA6NHG4 134 aaPredicted RBP19.71■□□□□ 0.75
SMPD3-201ENST00000219334 CAPZA2P47755 286 aa19.71■□□□□ 0.75
SMPD3-201ENST00000219334 GYS2P54840 703 aa19.71■□□□□ 0.75
SMPD3-201ENST00000219334 TMEM39AQ9NV64 488 aa19.71■□□□□ 0.75
SMPD3-201ENST00000219334 FBXO21O94952 628 aa19.71■□□□□ 0.75
SMPD3-201ENST00000219334 TGFB3P10600 412 aa19.71■□□□□ 0.75
SMPD3-201ENST00000219334 FDFT1P37268 417 aa19.71■□□□□ 0.75
SMPD3-201ENST00000219334 RAB27AP51159 221 aa19.71■□□□□ 0.75
SMPD3-201ENST00000219334 CSE1LP55060 971 aaKnown RBP19.71■□□□□ 0.75
SMPD3-201ENST00000219334 TP53BP2Q13625 1128 aa19.71■□□□□ 0.75
SMPD3-201ENST00000219334 NR1I3Q14994 352 aa19.71■□□□□ 0.75
SMPD3-201ENST00000219334 SGO1Q5FBB7 561 aa19.71■□□□□ 0.75
SMPD3-201ENST00000219334 MRNIPQ6NTE8 343 aa19.71■□□□□ 0.75
SMPD3-201ENST00000219334 C3orf62Q6ZUJ4 267 aa19.71■□□□□ 0.75
SMPD3-201ENST00000219334 NLRP14Q86W24 1093 aa19.71■□□□□ 0.75
SMPD3-201ENST00000219334 NUP93Q8N1F7 819 aa19.71■□□□□ 0.75
SMPD3-201ENST00000219334 FAM71DQ8N9W8 422 aa19.71■□□□□ 0.75
SMPD3-201ENST00000219334 CYFIP2Q96F07 1278 aa19.71■□□□□ 0.75
SMPD3-201ENST00000219334 FAM118BQ9BPY3 351 aa19.71■□□□□ 0.75
SMPD3-201ENST00000219334 MRPL1Q9BYD6 325 aaKnown RBP19.71■□□□□ 0.75
SMPD3-201ENST00000219334 VPS33BQ9H267 617 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms