RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 ZNF394Q53GI3 561 aa18.19■□□□□ 0.5
USB1-201ENST00000219281 TFDP3Q5H9I0 405 aa18.19■□□□□ 0.5
USB1-201ENST00000219281 LRRC38Q5VT99 294 aa18.19■□□□□ 0.5
USB1-201ENST00000219281 NSUN6Q8TEA1 469 aaKnown RBP18.19■□□□□ 0.5
USB1-201ENST00000219281 LRMDAQ9H2I8 198 aa18.19■□□□□ 0.5
USB1-201ENST00000219281 PSMC3IPQ9P2W1 217 aaPredicted RBP18.19■□□□□ 0.5
USB1-201ENST00000219281 AFG3L2Q9Y4W6 797 aa18.19■□□□□ 0.5
USB1-201ENST00000219281 ATP2A1O14983 1001 aa18.18■□□□□ 0.5
USB1-201ENST00000219281 CST3P01034 146 aaPredicted RBP18.18■□□□□ 0.5
USB1-201ENST00000219281 CDKN2BP42772 138 aa18.18■□□□□ 0.5
USB1-201ENST00000219281 PSMC4P43686 418 aa18.18■□□□□ 0.5
USB1-201ENST00000219281 GPX6P59796 221 aa18.18■□□□□ 0.5
USB1-201ENST00000219281 GAD2Q05329 585 aa18.18■□□□□ 0.5
USB1-201ENST00000219281 MAB21L3Q8N8X9 362 aa18.18■□□□□ 0.5
USB1-201ENST00000219281 C10orf88Q9H8K7 445 aa18.18■□□□□ 0.5
USB1-201ENST00000219281 SAE1Q9UBE0 346 aaPredicted RBP18.18■□□□□ 0.5
USB1-201ENST00000219281 ARID2Q68CP9 1835 aa18.18■□□□□ 0.5
USB1-201ENST00000219281 TCRBV5S1A1TA0A578 114 aa18.18■□□□□ 0.5
USB1-201ENST00000219281 KIF1CO43896 1103 aaKnown RBP18.18■□□□□ 0.5
USB1-201ENST00000219281 DCTN3O75935 186 aa18.18■□□□□ 0.5
USB1-201ENST00000219281 ITGAVP06756 1048 aa18.18■□□□□ 0.5
USB1-201ENST00000219281 FGFR1P11362 822 aa18.18■□□□□ 0.5
USB1-201ENST00000219281 ATP4AP20648 1035 aa18.18■□□□□ 0.5
USB1-201ENST00000219281 ALDH3A1P30838 453 aa18.18■□□□□ 0.5
USB1-201ENST00000219281 ZNF132P52740 706 aa18.18■□□□□ 0.5
USB1-201ENST00000219281 OAZ1P54368 228 aa18.18■□□□□ 0.5
USB1-201ENST00000219281 EFTUD2Q15029 972 aaKnown RBP eCLIP18.18■□□□□ 0.5
USB1-201ENST00000219281 PARP6Q2NL67 630 aa18.18■□□□□ 0.5
USB1-201ENST00000219281 ZNF449Q6P9G9 518 aa18.18■□□□□ 0.5
USB1-201ENST00000219281 LVRNQ6Q4G3 990 aa18.18■□□□□ 0.5
USB1-201ENST00000219281 GPC2Q8N158 579 aa18.18■□□□□ 0.5
USB1-201ENST00000219281 KCNV2Q8TDN2 545 aa18.18■□□□□ 0.5
USB1-201ENST00000219281 C10orf82Q8WW14 230 aa18.18■□□□□ 0.5
USB1-201ENST00000219281 PORCNQ9H237 461 aa18.18■□□□□ 0.5
USB1-201ENST00000219281 SLC24A2Q9UI40 661 aa18.18■□□□□ 0.5
USB1-201ENST00000219281 SHOC2Q9UQ13 582 aa18.18■□□□□ 0.5
USB1-201ENST00000219281 A0A0B4J269 797 aa18.17■□□□□ 0.5
USB1-201ENST00000219281 USP2O75604 605 aaPredicted RBP18.17■□□□□ 0.5
USB1-201ENST00000219281 PIAS1O75925 651 aa18.17■□□□□ 0.5
USB1-201ENST00000219281 WFS1O76024 890 aa18.17■□□□□ 0.5
USB1-201ENST00000219281 PIGRP01833 764 aa18.17■□□□□ 0.5
USB1-201ENST00000219281 SUPT20HL2P0C7V6 817 aa18.17■□□□□ 0.5
USB1-201ENST00000219281 KRT4P19013 534 aa18.17■□□□□ 0.5
USB1-201ENST00000219281 DYNLT1P63172 113 aa18.17■□□□□ 0.5
USB1-201ENST00000219281 SUPT20HL1Q3ZLR7 823 aa18.17■□□□□ 0.5
USB1-201ENST00000219281 UBR7Q8N806 425 aa18.17■□□□□ 0.5
USB1-201ENST00000219281 NKD2Q969F2 451 aaPredicted RBP18.17■□□□□ 0.5
USB1-201ENST00000219281 IMPG2Q9BZV3 1241 aa18.17■□□□□ 0.5
USB1-201ENST00000219281 PCDH9Q9HC56 1237 aa18.17■□□□□ 0.5
USB1-201ENST00000219281 SLC5A4Q9NY91 659 aa18.17■□□□□ 0.5
USB1-201ENST00000219281 KCNG1Q9UIX4 513 aa18.17■□□□□ 0.5
USB1-201ENST00000219281 COL11A1P12107 1806 aaPredicted RBP18.17■□□□□ 0.5
USB1-201ENST00000219281 T-ENOLP0DO92 83 aa18.16■□□□□ 0.5
USB1-201ENST00000219281 NAMPTP43490 491 aa18.16■□□□□ 0.5
USB1-201ENST00000219281 GEMIN4P57678 1058 aaKnown RBP18.16■□□□□ 0.5
USB1-201ENST00000219281 CYP4A22Q5TCH4 519 aa18.16■□□□□ 0.5
USB1-201ENST00000219281 OTOAQ7RTW8 1153 aa18.16■□□□□ 0.5
USB1-201ENST00000219281 AGGF1Q8N302 714 aaeCLIP18.16■□□□□ 0.5
USB1-201ENST00000219281 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.16■□□□□ 0.5
USB1-201ENST00000219281 ZNF75CPQ92670 426 aaPredicted RBP18.16■□□□□ 0.5
USB1-201ENST00000219281 DDX56Q9NY93 547 aaKnown RBP18.16■□□□□ 0.5
USB1-201ENST00000219281 CYP39A1Q9NYL5 469 aa18.16■□□□□ 0.5
USB1-201ENST00000219281 NKX1-2Q9UD57 310 aaPredicted RBP18.16■□□□□ 0.5
USB1-201ENST00000219281 RABGEF1Q9UJ41 708 aa18.16■□□□□ 0.5
USB1-201ENST00000219281 PHIPQ8WWQ0 1821 aa18.16■□□□□ 0.5
USB1-201ENST00000219281 SSTR1P30872 391 aa18.16■□□□□ 0.5
USB1-201ENST00000219281 PTPN7P35236 360 aa18.16■□□□□ 0.5
USB1-201ENST00000219281 SP2Q02086 613 aa18.16■□□□□ 0.5
USB1-201ENST00000219281 TFDP1Q14186 410 aa18.16■□□□□ 0.5
USB1-201ENST00000219281 PIGHQ14442 188 aaPredicted RBP18.16■□□□□ 0.5
USB1-201ENST00000219281 HIF1AQ16665 826 aa18.16■□□□□ 0.5
USB1-201ENST00000219281 EFHC2Q5JST6 749 aa18.16■□□□□ 0.5
USB1-201ENST00000219281 ANKRD20A2Q5SQ80 823 aa18.16■□□□□ 0.5
USB1-201ENST00000219281 ANKRD20A1Q5TYW2 823 aa18.16■□□□□ 0.5
USB1-201ENST00000219281 ANKRD20A3Q5VUR7 823 aa18.16■□□□□ 0.5
USB1-201ENST00000219281 ANKRD22Q5VYY1 191 aa18.16■□□□□ 0.5
USB1-201ENST00000219281 GPAT2Q6NUI2 795 aa18.16■□□□□ 0.5
USB1-201ENST00000219281 BZW1Q7L1Q6 419 aaKnown RBP18.16■□□□□ 0.5
USB1-201ENST00000219281 TAB3Q8N5C8 712 aaPredicted RBP18.16■□□□□ 0.5
USB1-201ENST00000219281 TMEM35BQ8NCS4 154 aa18.16■□□□□ 0.5
USB1-201ENST00000219281 ZNF526Q8TF50 670 aaPredicted RBP18.16■□□□□ 0.5
USB1-201ENST00000219281 CLUHO75153 1309 aa18.16■□□□□ 0.5
USB1-201ENST00000219281 ADGRA2Q96PE1 1338 aa18.16■□□□□ 0.5
USB1-201ENST00000219281 WDR91A4D1P6 747 aa18.15■□□□□ 0.5
USB1-201ENST00000219281 SPDYE16A6NNV3 312 aaPredicted RBP18.15■□□□□ 0.5
USB1-201ENST00000219281 SPATA31C2B4DYI2 1134 aa18.15■□□□□ 0.5
USB1-201ENST00000219281 CBX6O95503 412 aa18.15■□□□□ 0.5
USB1-201ENST00000219281 ARL2P36404 184 aa18.15■□□□□ 0.5
USB1-201ENST00000219281 TNFSF9P41273 254 aa18.15■□□□□ 0.5
USB1-201ENST00000219281 CTCFP49711 727 aaPredicted RBP18.15■□□□□ 0.5
USB1-201ENST00000219281 GDF10P55107 478 aa18.15■□□□□ 0.5
USB1-201ENST00000219281 RNASELQ05823 741 aaKnown RBP18.15■□□□□ 0.5
USB1-201ENST00000219281 MSS51Q4VC12 460 aa18.15■□□□□ 0.5
USB1-201ENST00000219281 NOL9Q5SY16 702 aaKnown RBP18.15■□□□□ 0.5
USB1-201ENST00000219281 FNBP1LQ5T0N5 605 aa18.15■□□□□ 0.5
USB1-201ENST00000219281 LONP2Q86WA8 852 aa18.15■□□□□ 0.5
USB1-201ENST00000219281 WDTC1Q8N5D0 677 aa18.15■□□□□ 0.5
USB1-201ENST00000219281 SLC35B2Q8TB61 432 aa18.15■□□□□ 0.5
USB1-201ENST00000219281 PYROXD1Q8WU10 500 aa18.15■□□□□ 0.5
USB1-201ENST00000219281 SLC7A6OSQ96CW6 309 aaPredicted RBP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms