RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 FAM172AQ8WUF8 416 aa15.36■□□□□ 0.05
PTPRA-201ENST00000216877 CLIP3Q96DZ5 547 aa15.36■□□□□ 0.05
PTPRA-201ENST00000216877 SLC13A1Q9BZW2 595 aa15.36■□□□□ 0.05
PTPRA-201ENST00000216877 CCNL1Q9UK58 526 aaPredicted RBP15.36■□□□□ 0.05
PTPRA-201ENST00000216877 CASQ2O14958 399 aaPredicted RBP15.35■□□□□ 0.05
PTPRA-201ENST00000216877 TBCAO75347 108 aaKnown RBP15.35■□□□□ 0.05
PTPRA-201ENST00000216877 NCF2P19878 526 aaPredicted RBP15.35■□□□□ 0.05
PTPRA-201ENST00000216877 EMP3P54852 163 aa15.35■□□□□ 0.05
PTPRA-201ENST00000216877 AQP5P55064 265 aa15.35■□□□□ 0.05
PTPRA-201ENST00000216877 ZNF362Q5T0B9 420 aaPredicted RBP15.35■□□□□ 0.05
PTPRA-201ENST00000216877 NLRX1Q86UT6 975 aa15.35■□□□□ 0.05
PTPRA-201ENST00000216877 PALM2Q8IXS6 379 aa15.35■□□□□ 0.05
PTPRA-201ENST00000216877 CCDC89Q8N998 374 aa15.35■□□□□ 0.05
PTPRA-201ENST00000216877 WNT8AQ9H1J5 351 aa15.35■□□□□ 0.05
PTPRA-201ENST00000216877 BARHL2Q9NY43 387 aa15.35■□□□□ 0.05
PTPRA-201ENST00000216877 TELO2Q9Y4R8 837 aa15.35■□□□□ 0.05
PTPRA-201ENST00000216877 GPC6Q9Y625 555 aaPredicted RBP15.35■□□□□ 0.05
PTPRA-201ENST00000216877 NOP56O00567 594 aaKnown RBP15.35■□□□□ 0.05
PTPRA-201ENST00000216877 CFLARO15519 480 aa15.35■□□□□ 0.05
PTPRA-201ENST00000216877 PROCP04070 461 aa15.35■□□□□ 0.05
PTPRA-201ENST00000216877 CSF1RP07333 972 aa15.35■□□□□ 0.05
PTPRA-201ENST00000216877 POLR2MP0CAP2 368 aa15.35■□□□□ 0.05
PTPRA-201ENST00000216877 SSTR1P30872 391 aa15.35■□□□□ 0.05
PTPRA-201ENST00000216877 HDAC4P56524 1084 aa15.35■□□□□ 0.05
PTPRA-201ENST00000216877 KCNA1Q09470 495 aa15.35■□□□□ 0.05
PTPRA-201ENST00000216877 GPS1Q13098 491 aa15.35■□□□□ 0.05
PTPRA-201ENST00000216877 MSLNQ13421 630 aaPredicted RBP15.35■□□□□ 0.05
PTPRA-201ENST00000216877 PDCD4Q53EL6 469 aaKnown RBP15.35■□□□□ 0.05
PTPRA-201ENST00000216877 KRT80Q6KB66 452 aa15.35■□□□□ 0.05
PTPRA-201ENST00000216877 CLVS1Q8IUQ0 354 aaPredicted RBP15.35■□□□□ 0.05
PTPRA-201ENST00000216877 TGFBRAP1Q8WUH2 860 aa15.35■□□□□ 0.05
PTPRA-201ENST00000216877 TMIGD2Q96BF3 282 aa15.35■□□□□ 0.05
PTPRA-201ENST00000216877 COX4I2Q96KJ9 171 aa15.35■□□□□ 0.05
PTPRA-201ENST00000216877 AGPAT1Q99943 283 aa15.35■□□□□ 0.05
PTPRA-201ENST00000216877 F8W8V4 182 aa15.35■□□□□ 0.05
PTPRA-201ENST00000216877 MATN2O00339 956 aa15.35■□□□□ 0.05
PTPRA-201ENST00000216877 FDFT1P37268 417 aa15.35■□□□□ 0.05
PTPRA-201ENST00000216877 UBE2SQ16763 222 aa15.35■□□□□ 0.05
PTPRA-201ENST00000216877 ARSHQ5FYA8 562 aa15.35■□□□□ 0.05
PTPRA-201ENST00000216877 PACS1Q6VY07 963 aa15.35■□□□□ 0.05
PTPRA-201ENST00000216877 PIGSQ96S52 555 aa15.35■□□□□ 0.05
PTPRA-201ENST00000216877 GPATCH1Q9BRR8 931 aaKnown RBP15.35■□□□□ 0.05
PTPRA-201ENST00000216877 RSL24D1Q9UHA3 163 aaKnown RBP15.35■□□□□ 0.05
PTPRA-201ENST00000216877 TAGLN3Q9UI15 199 aa15.35■□□□□ 0.05
PTPRA-201ENST00000216877 SBF2Q86WG5 1849 aa15.35■□□□□ 0.05
PTPRA-201ENST00000216877 GIPC1O14908 333 aa15.34■□□□□ 0.05
PTPRA-201ENST00000216877 MX2P20592 715 aa15.34■□□□□ 0.05
PTPRA-201ENST00000216877 STAT3P40763 770 aa15.34■□□□□ 0.05
PTPRA-201ENST00000216877 CTSWP56202 376 aa15.34■□□□□ 0.05
PTPRA-201ENST00000216877 EPHA7Q15375 998 aa15.34■□□□□ 0.05
PTPRA-201ENST00000216877 BBS9Q3SYG4 887 aa15.34■□□□□ 0.05
PTPRA-201ENST00000216877 CAVIN4Q5BKX8 364 aa15.34■□□□□ 0.05
PTPRA-201ENST00000216877 PPP6R3Q5H9R7 873 aaPredicted RBP15.34■□□□□ 0.05
PTPRA-201ENST00000216877 KLHL25Q9H0H3 589 aa15.34■□□□□ 0.05
PTPRA-201ENST00000216877 AP4B1Q9Y6B7 739 aa15.34■□□□□ 0.05
PTPRA-201ENST00000216877 BCORQ6W2J9 1755 aa15.34■□□□□ 0.05
PTPRA-201ENST00000216877 DOT1LQ8TEK3 1739 aa15.34■□□□□ 0.05
PTPRA-201ENST00000216877 LOC102724428A0A0B4J2F2 783 aa15.34■□□□□ 0.05
PTPRA-201ENST00000216877 POTEFA5A3E0 1075 aa15.34■□□□□ 0.05
PTPRA-201ENST00000216877 GGPS1O95749 300 aa15.34■□□□□ 0.05
PTPRA-201ENST00000216877 POTEIP0CG38 1075 aa15.34■□□□□ 0.05
PTPRA-201ENST00000216877 CDH3P22223 829 aa15.34■□□□□ 0.05
PTPRA-201ENST00000216877 SMARCA1P28370 1054 aa15.34■□□□□ 0.05
PTPRA-201ENST00000216877 SIK1P57059 783 aa15.34■□□□□ 0.05
PTPRA-201ENST00000216877 PRAMEP78395 509 aa15.34■□□□□ 0.05
PTPRA-201ENST00000216877 OTUD4Q01804 1114 aaKnown RBP15.34■□□□□ 0.05
PTPRA-201ENST00000216877 KNOP1Q1ED39 458 aaKnown RBP15.34■□□□□ 0.05
PTPRA-201ENST00000216877 FAM182AQ5T1J6 154 aa15.34■□□□□ 0.05
PTPRA-201ENST00000216877 POTEGQ6S5H5 508 aa15.34■□□□□ 0.05
PTPRA-201ENST00000216877 DENND5BQ6ZUT9 1274 aa15.34■□□□□ 0.05
PTPRA-201ENST00000216877 TMC7Q7Z402 723 aa15.34■□□□□ 0.05
PTPRA-201ENST00000216877 GPR101Q96P66 508 aaPredicted RBP15.34■□□□□ 0.05
PTPRA-201ENST00000216877 MECRQ9BV79 373 aa15.34■□□□□ 0.05
PTPRA-201ENST00000216877 TFCP2L1Q9NZI6 479 aa15.34■□□□□ 0.05
PTPRA-201ENST00000216877 PSMC3IPQ9P2W1 217 aaPredicted RBP15.34■□□□□ 0.05
PTPRA-201ENST00000216877 LGALS13Q9UHV8 139 aa15.34■□□□□ 0.05
PTPRA-201ENST00000216877 VPS51Q9UID3 782 aa15.34■□□□□ 0.05
PTPRA-201ENST00000216877 ANAPC7Q9UJX3 599 aa15.34■□□□□ 0.05
PTPRA-201ENST00000216877 WDR46O15213 610 aaKnown RBP15.34■□□□□ 0.05
PTPRA-201ENST00000216877 MAGEB2O15479 319 aa15.34■□□□□ 0.05
PTPRA-201ENST00000216877 TNFAIP8O95379 198 aa15.34■□□□□ 0.05
PTPRA-201ENST00000216877 USP17L8P0C7I0 530 aa15.34■□□□□ 0.05
PTPRA-201ENST00000216877 MUTP22033 750 aa15.34■□□□□ 0.05
PTPRA-201ENST00000216877 ALDH1A3P47895 512 aa15.34■□□□□ 0.05
PTPRA-201ENST00000216877 ZBTB17Q13105 803 aa15.34■□□□□ 0.05
PTPRA-201ENST00000216877 USH1GQ495M9 461 aa15.34■□□□□ 0.05
PTPRA-201ENST00000216877 METTL21CQ5VZV1 264 aa15.34■□□□□ 0.05
PTPRA-201ENST00000216877 RSPH3Q86UC2 560 aa15.34■□□□□ 0.05
PTPRA-201ENST00000216877 RNF148Q8N7C7 305 aa15.34■□□□□ 0.05
PTPRA-201ENST00000216877 PYROXD1Q8WU10 500 aa15.34■□□□□ 0.05
PTPRA-201ENST00000216877 ELMO3Q96BJ8 720 aa15.34■□□□□ 0.05
PTPRA-201ENST00000216877 APOL6Q9BWW8 343 aa15.34■□□□□ 0.05
PTPRA-201ENST00000216877 NUF2Q9BZD4 464 aa15.34■□□□□ 0.05
PTPRA-201ENST00000216877 PCDHA3Q9Y5H8 950 aa15.34■□□□□ 0.05
PTPRA-201ENST00000216877 FADS3Q9Y5Q0 445 aa15.34■□□□□ 0.05
PTPRA-201ENST00000216877 ACTL7BQ9Y614 415 aa15.34■□□□□ 0.05
PTPRA-201ENST00000216877 J3QRK9 145 aa15.33■□□□□ 0.05
PTPRA-201ENST00000216877 FAM58BPP0C7Q3 252 aa15.33■□□□□ 0.05
PTPRA-201ENST00000216877 ETS1P14921 441 aa15.33■□□□□ 0.05
PTPRA-201ENST00000216877 MAPK4P31152 587 aa15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms