RNA–Protein interactions for RNA: ENST00000194152.3

PCDHB4-201, Transcript of protocadherin beta 4, humanhuman

APPRIS P1 BASIC

Gene PCDHB4, Length 3,825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4-201ENST00000194152 TUT1Q9H6E5 874 aaKnown RBP13.58□□□□□ -0.23
PCDHB4-201ENST00000194152 MAFGO15525 162 aa13.58□□□□□ -0.24
PCDHB4-201ENST00000194152 PJA2O43164 708 aa13.58□□□□□ -0.24
PCDHB4-201ENST00000194152 RTN3O95197 1032 aaPredicted RBP13.58□□□□□ -0.24
PCDHB4-201ENST00000194152 UBTFL6P0CB48 400 aaPredicted RBP13.58□□□□□ -0.24
PCDHB4-201ENST00000194152 ZCCHC18P0CG32 403 aa13.58□□□□□ -0.24
PCDHB4-201ENST00000194152 ZNF280AP59817 542 aaPredicted RBP13.58□□□□□ -0.24
PCDHB4-201ENST00000194152 IFI35P80217 286 aaPredicted RBP13.58□□□□□ -0.24
PCDHB4-201ENST00000194152 SLC39A4Q6P5W5 647 aa13.58□□□□□ -0.24
PCDHB4-201ENST00000194152 DARS2Q6PI48 645 aaKnown RBP13.58□□□□□ -0.24
PCDHB4-201ENST00000194152 FASTKD5Q7L8L6 764 aaKnown RBP13.58□□□□□ -0.24
PCDHB4-201ENST00000194152 C12orf29Q8N999 325 aa13.58□□□□□ -0.24
PCDHB4-201ENST00000194152 PPFIBP2Q8ND30 876 aa13.58□□□□□ -0.24
PCDHB4-201ENST00000194152 SNRNP27Q8WVK2 155 aaKnown RBP13.58□□□□□ -0.24
PCDHB4-201ENST00000194152 RUNDC3BQ96NL0 473 aa13.58□□□□□ -0.24
PCDHB4-201ENST00000194152 A8MXQ7 604 aa13.58□□□□□ -0.24
PCDHB4-201ENST00000194152 FARP2O94887 1054 aaPredicted RBP13.58□□□□□ -0.24
PCDHB4-201ENST00000194152 NFICP08651 508 aa13.58□□□□□ -0.24
PCDHB4-201ENST00000194152 RABGGTBP53611 331 aa13.58□□□□□ -0.24
PCDHB4-201ENST00000194152 SLC13A5Q86YT5 568 aaPredicted RBP13.58□□□□□ -0.24
PCDHB4-201ENST00000194152 MFN1Q8IWA4 741 aa13.58□□□□□ -0.24
PCDHB4-201ENST00000194152 KLHL23Q8NBE8 558 aa13.58□□□□□ -0.24
PCDHB4-201ENST00000194152 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.58□□□□□ -0.24
PCDHB4-201ENST00000194152 MAIP1Q8WWC4 291 aa13.58□□□□□ -0.24
PCDHB4-201ENST00000194152 ZNF516Q92618 1163 aa13.58□□□□□ -0.24
PCDHB4-201ENST00000194152 LPIN3Q9BQK8 851 aa13.58□□□□□ -0.24
PCDHB4-201ENST00000194152 ERP44Q9BS26 406 aa13.58□□□□□ -0.24
PCDHB4-201ENST00000194152 OSBPL8Q9BZF1 889 aa13.58□□□□□ -0.24
PCDHB4-201ENST00000194152 TJP2Q9UDY2 1190 aa13.58□□□□□ -0.24
PCDHB4-201ENST00000194152 SPATA31C2B4DYI2 1134 aa13.57□□□□□ -0.24
PCDHB4-201ENST00000194152 FZD9O00144 591 aa13.57□□□□□ -0.24
PCDHB4-201ENST00000194152 PODXLO00592 558 aa13.57□□□□□ -0.24
PCDHB4-201ENST00000194152 TOM1L1O75674 476 aa13.57□□□□□ -0.24
PCDHB4-201ENST00000194152 STAG3L1P0CL83 205 aa13.57□□□□□ -0.24
PCDHB4-201ENST00000194152 CA4P22748 312 aa13.57□□□□□ -0.24
PCDHB4-201ENST00000194152 ACAT1P24752 427 aaKnown RBP13.57□□□□□ -0.24
PCDHB4-201ENST00000194152 BLMHQ13867 455 aa13.57□□□□□ -0.24
PCDHB4-201ENST00000194152 CLUL1Q15846 466 aa13.57□□□□□ -0.24
PCDHB4-201ENST00000194152 CDCA2Q69YH5 1023 aaPredicted RBP13.57□□□□□ -0.24
PCDHB4-201ENST00000194152 LBX2Q6XYB7 198 aa13.57□□□□□ -0.24
PCDHB4-201ENST00000194152 MAGEC3Q8TD91 643 aa13.57□□□□□ -0.24
PCDHB4-201ENST00000194152 FIZ1Q96SL8 496 aa13.57□□□□□ -0.24
PCDHB4-201ENST00000194152 AP5M1Q9H0R1 490 aa13.57□□□□□ -0.24
PCDHB4-201ENST00000194152 ERAP1Q9NZ08 941 aa13.57□□□□□ -0.24
PCDHB4-201ENST00000194152 PTPRJQ12913 1337 aa13.57□□□□□ -0.24
PCDHB4-201ENST00000194152 DCAF8L1A6NGE4 600 aa13.57□□□□□ -0.24
PCDHB4-201ENST00000194152 PYGBP11216 843 aa13.57□□□□□ -0.24
PCDHB4-201ENST00000194152 PRLRP16471 622 aa13.57□□□□□ -0.24
PCDHB4-201ENST00000194152 ALDH3A1P30838 453 aa13.57□□□□□ -0.24
PCDHB4-201ENST00000194152 NAMPTP43490 491 aa13.57□□□□□ -0.24
PCDHB4-201ENST00000194152 ARSEP51690 589 aa13.57□□□□□ -0.24
PCDHB4-201ENST00000194152 NME3Q13232 169 aa13.57□□□□□ -0.24
PCDHB4-201ENST00000194152 BMT2Q1RMZ1 405 aa13.57□□□□□ -0.24
PCDHB4-201ENST00000194152 MYLK4Q86YV6 388 aaPredicted RBP13.57□□□□□ -0.24
PCDHB4-201ENST00000194152 TMEM237Q96Q45 408 aa13.57□□□□□ -0.24
PCDHB4-201ENST00000194152 RAB3IPQ96QF0 476 aaPredicted RBP13.57□□□□□ -0.24
PCDHB4-201ENST00000194152 TMEM121Q9BTD3 319 aa13.57□□□□□ -0.24
PCDHB4-201ENST00000194152 EBF2Q9HAK2 575 aa13.57□□□□□ -0.24
PCDHB4-201ENST00000194152 GDF3Q9NR23 364 aa13.57□□□□□ -0.24
PCDHB4-201ENST00000194152 GINM1Q9NU53 330 aa13.57□□□□□ -0.24
PCDHB4-201ENST00000194152 TXNDC16Q9P2K2 825 aa13.57□□□□□ -0.24
PCDHB4-201ENST00000194152 ADAMTSL1Q8N6G6 1762 aa13.57□□□□□ -0.24
PCDHB4-201ENST00000194152 PFASO15067 1338 aa13.57□□□□□ -0.24
PCDHB4-201ENST00000194152 ADCY3O60266 1144 aa13.57□□□□□ -0.24
PCDHB4-201ENST00000194152 BRAFP15056 766 aa13.57□□□□□ -0.24
PCDHB4-201ENST00000194152 CHRNA3P32297 505 aa13.57□□□□□ -0.24
PCDHB4-201ENST00000194152 CDH6P55285 790 aa13.57□□□□□ -0.24
PCDHB4-201ENST00000194152 COPS2P61201 443 aa13.57□□□□□ -0.24
PCDHB4-201ENST00000194152 HADHQ16836 314 aaKnown RBP13.57□□□□□ -0.24
PCDHB4-201ENST00000194152 P3H1Q32P28 736 aa13.57□□□□□ -0.24
PCDHB4-201ENST00000194152 IZUMO3Q5VZ72 239 aa13.57□□□□□ -0.24
PCDHB4-201ENST00000194152 SPATA21Q7Z572 469 aa13.57□□□□□ -0.24
PCDHB4-201ENST00000194152 DDX27Q96GQ7 796 aaKnown RBP13.57□□□□□ -0.24
PCDHB4-201ENST00000194152 CEP41Q9BYV8 373 aa13.57□□□□□ -0.24
PCDHB4-201ENST00000194152 FAM129AQ9BZQ8 928 aa13.57□□□□□ -0.24
PCDHB4-201ENST00000194152 SMYD3Q9H7B4 428 aa13.57□□□□□ -0.24
PCDHB4-201ENST00000194152 SNTG2Q9NY99 539 aa13.57□□□□□ -0.24
PCDHB4-201ENST00000194152 KAT6AQ92794 2004 aa13.56□□□□□ -0.24
PCDHB4-201ENST00000194152 OGTO15294 1046 aa13.56□□□□□ -0.24
PCDHB4-201ENST00000194152 CYP2C9P11712 490 aa13.56□□□□□ -0.24
PCDHB4-201ENST00000194152 HSPA6P17066 643 aa13.56□□□□□ -0.24
PCDHB4-201ENST00000194152 HOXA7P31268 230 aaPredicted RBP13.56□□□□□ -0.24
PCDHB4-201ENST00000194152 NRLP54845 237 aa13.56□□□□□ -0.24
PCDHB4-201ENST00000194152 KDELC2Q7Z4H8 507 aa13.56□□□□□ -0.24
PCDHB4-201ENST00000194152 APBB1IPQ7Z5R6 666 aaPredicted RBP13.56□□□□□ -0.24
PCDHB4-201ENST00000194152 HPDLQ96IR7 371 aa13.56□□□□□ -0.24
PCDHB4-201ENST00000194152 FAM167AQ96KS9 214 aa13.56□□□□□ -0.24
PCDHB4-201ENST00000194152 ACAP3Q96P50 834 aa13.56□□□□□ -0.24
PCDHB4-201ENST00000194152 KIAA1586Q9HCI6 787 aa13.56□□□□□ -0.24
PCDHB4-201ENST00000194152 DDX60LQ5H9U9 1706 aaKnown RBP13.56□□□□□ -0.24
PCDHB4-201ENST00000194152 RASA4BC9J798 803 aa13.56□□□□□ -0.24
PCDHB4-201ENST00000194152 RASA4O43374 803 aa13.56□□□□□ -0.24
PCDHB4-201ENST00000194152 BANF1O75531 89 aa13.56□□□□□ -0.24
PCDHB4-201ENST00000194152 TMED1Q13445 227 aa13.56□□□□□ -0.24
PCDHB4-201ENST00000194152 ZBED8Q8IZ13 594 aa13.56□□□□□ -0.24
PCDHB4-201ENST00000194152 DNAJB3Q8WWF6 145 aa13.56□□□□□ -0.24
PCDHB4-201ENST00000194152 DNAJC9Q8WXX5 260 aa13.56□□□□□ -0.24
PCDHB4-201ENST00000194152 STMN2Q93045 179 aa13.56□□□□□ -0.24
PCDHB4-201ENST00000194152 DDX50Q9BQ39 737 aaKnown RBP13.56□□□□□ -0.24
PCDHB4-201ENST00000194152 GOLGA2P5Q9HBQ8 144 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms