RNA–Protein interactions for RNA: ENSMUST00000215817.1

Upf1-202, Transcript of Regulator of nonsense transcripts 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Upf1, Length 4,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1-202ENSMUST00000215817 Zc3h6Q8BYK8 1177 aa16.1■□□□□ 0.17
Upf1-202ENSMUST00000215817 Oit3Q8R4V5 546 aa16.1■□□□□ 0.17
Upf1-202ENSMUST00000215817 RpgrQ9R0X5 1001 aa16.1■□□□□ 0.17
Upf1-202ENSMUST00000215817 Prmt2Q9R144 448 aa16.1■□□□□ 0.17
Upf1-202ENSMUST00000215817 Nlrp1bA1Z198 1177 aa16.09■□□□□ 0.17
Upf1-202ENSMUST00000215817 Smad1P70340 465 aa16.09■□□□□ 0.17
Upf1-202ENSMUST00000215817 VegfaQ00731 214 aa16.09■□□□□ 0.17
Upf1-202ENSMUST00000215817 PighQ5M9N4 188 aa16.09■□□□□ 0.17
Upf1-202ENSMUST00000215817 Sema5aQ62217 1077 aa16.09■□□□□ 0.17
Upf1-202ENSMUST00000215817 ParvaQ9EPC1 372 aa16.09■□□□□ 0.17
Upf1-202ENSMUST00000215817 CopeO89079 308 aa16.09■□□□□ 0.17
Upf1-202ENSMUST00000215817 Serac1Q3U213 654 aa16.09■□□□□ 0.17
Upf1-202ENSMUST00000215817 Stk40Q7TNL3 435 aa16.09■□□□□ 0.17
Upf1-202ENSMUST00000215817 Q922C1 641 aa16.09■□□□□ 0.17
Upf1-202ENSMUST00000215817 Nsmce1Q9D720 266 aa16.09■□□□□ 0.17
Upf1-202ENSMUST00000215817 Art2bO35975 289 aa16.09■□□□□ 0.17
Upf1-202ENSMUST00000215817 Nub1P54729 614 aa16.09■□□□□ 0.17
Upf1-202ENSMUST00000215817 Ccdc160Q3UYG1 323 aa16.09■□□□□ 0.17
Upf1-202ENSMUST00000215817 Gpatch2lQ6PE65 482 aa16.09■□□□□ 0.17
Upf1-202ENSMUST00000215817 Clec1aQ8BWY2 269 aa16.09■□□□□ 0.17
Upf1-202ENSMUST00000215817 Pcdha10Q91Y20 946 aa16.09■□□□□ 0.17
Upf1-202ENSMUST00000215817 Tubgcp4Q9D4F8 667 aa16.09■□□□□ 0.17
Upf1-202ENSMUST00000215817 Tlr9Q9EQU3 1032 aa16.09■□□□□ 0.17
Upf1-202ENSMUST00000215817 Gm28036V9GXJ1 658 aa16.09■□□□□ 0.17
Upf1-202ENSMUST00000215817 Zfp850J3QPC5 689 aa16.09■□□□□ 0.17
Upf1-202ENSMUST00000215817 Casp2P29594 452 aa16.09■□□□□ 0.17
Upf1-202ENSMUST00000215817 Rfc1P35601 1131 aa16.09■□□□□ 0.17
Upf1-202ENSMUST00000215817 Prdx5P99029 210 aa16.09■□□□□ 0.17
Upf1-202ENSMUST00000215817 Cyp2c65Q148B1 490 aa16.09■□□□□ 0.17
Upf1-202ENSMUST00000215817 Tekt4Q149S1 447 aa16.09■□□□□ 0.17
Upf1-202ENSMUST00000215817 Ripk3Q9QZL0 486 aa16.09■□□□□ 0.17
Upf1-202ENSMUST00000215817 2210011C24RikA0A087WQ89 206 aa16.08■□□□□ 0.17
Upf1-202ENSMUST00000215817 Lcn6A2AJB9 181 aa16.08■□□□□ 0.17
Upf1-202ENSMUST00000215817 Taf4E9QAP7 1042 aaKnown RBP16.08■□□□□ 0.17
Upf1-202ENSMUST00000215817 Vmn2r100E9QAZ9 850 aa16.08■□□□□ 0.17
Upf1-202ENSMUST00000215817 Tap2P36371 702 aa16.08■□□□□ 0.17
Upf1-202ENSMUST00000215817 Kcnt1Q6ZPR4 1224 aa16.08■□□□□ 0.17
Upf1-202ENSMUST00000215817 Frmd4aQ8BIE6 1020 aa16.08■□□□□ 0.17
Upf1-202ENSMUST00000215817 Mageb18Q8BQR7 327 aa16.08■□□□□ 0.17
Upf1-202ENSMUST00000215817 Adnp2Q8CHC8 1165 aaKnown RBP16.08■□□□□ 0.17
Upf1-202ENSMUST00000215817 Tlcd1Q99JT6 247 aa16.08■□□□□ 0.17
Upf1-202ENSMUST00000215817 StambpQ9CQ26 424 aa16.08■□□□□ 0.17
Upf1-202ENSMUST00000215817 Peak1Q69Z38 1735 aa16.08■□□□□ 0.17
Upf1-202ENSMUST00000215817 Cyp4a29A0A087WPC3 509 aa16.08■□□□□ 0.16
Upf1-202ENSMUST00000215817 Ms4a14A0A087WSD2 1232 aa16.08■□□□□ 0.16
Upf1-202ENSMUST00000215817 Rrm1P07742 792 aa16.08■□□□□ 0.16
Upf1-202ENSMUST00000215817 Ctnnb1Q02248 781 aaKnown RBP16.08■□□□□ 0.16
Upf1-202ENSMUST00000215817 SrlQ7TQ48 910 aa16.08■□□□□ 0.16
Upf1-202ENSMUST00000215817 Olfr1499Q8VG65 314 aa16.08■□□□□ 0.16
Upf1-202ENSMUST00000215817 Nek8Q91ZR4 698 aa16.08■□□□□ 0.16
Upf1-202ENSMUST00000215817 Ap2a2P17427 938 aaKnown RBP16.08■□□□□ 0.16
Upf1-202ENSMUST00000215817 Stmn1P54227 149 aaKnown RBP16.08■□□□□ 0.16
Upf1-202ENSMUST00000215817 HelqQ2VPA6 1069 aa16.08■□□□□ 0.16
Upf1-202ENSMUST00000215817 Tmem199Q5SYH2 208 aa16.08■□□□□ 0.16
Upf1-202ENSMUST00000215817 PostnQ62009 838 aa16.08■□□□□ 0.16
Upf1-202ENSMUST00000215817 Irak1Q62406 710 aa16.08■□□□□ 0.16
Upf1-202ENSMUST00000215817 Adam6bQ6IMH7 756 aa16.08■□□□□ 0.16
Upf1-202ENSMUST00000215817 Lrig3Q6P1C6 1117 aa16.08■□□□□ 0.16
Upf1-202ENSMUST00000215817 NrcamQ810U4 1256 aa16.08■□□□□ 0.16
Upf1-202ENSMUST00000215817 Ttc16Q8C1F5 767 aa16.08■□□□□ 0.16
Upf1-202ENSMUST00000215817 HgsQ99LI8 775 aa16.08■□□□□ 0.16
Upf1-202ENSMUST00000215817 Snx24Q9CRB0 169 aa16.08■□□□□ 0.16
Upf1-202ENSMUST00000215817 Klc4Q9DBS5 619 aa16.08■□□□□ 0.16
Upf1-202ENSMUST00000215817 CtsfQ9R013 462 aa16.08■□□□□ 0.16
Upf1-202ENSMUST00000215817 Ccdc144bE9PVZ3 520 aa16.07■□□□□ 0.16
Upf1-202ENSMUST00000215817 Vmn2r19G5E8G4 854 aa16.07■□□□□ 0.16
Upf1-202ENSMUST00000215817 Ctnna1P26231 906 aaKnown RBP16.07■□□□□ 0.16
Upf1-202ENSMUST00000215817 Mbtd1Q6P5G3 631 aa16.07■□□□□ 0.16
Upf1-202ENSMUST00000215817 Tas1r3Q925D8 858 aa16.07■□□□□ 0.16
Upf1-202ENSMUST00000215817 IqcdQ9D3V1 458 aa16.07■□□□□ 0.16
Upf1-202ENSMUST00000215817 Trpc4Q9QUQ5 974 aa16.07■□□□□ 0.16
Upf1-202ENSMUST00000215817 Irs2P81122 1321 aa16.07■□□□□ 0.16
Upf1-202ENSMUST00000215817 Gm6370A0A0G2JGX9 315 aa16.07■□□□□ 0.16
Upf1-202ENSMUST00000215817 Magea10A2AMW4 325 aa16.07■□□□□ 0.16
Upf1-202ENSMUST00000215817 Gm7995L7N2E4 160 aa16.07■□□□□ 0.16
Upf1-202ENSMUST00000215817 Gm6309L7N481 315 aa16.07■□□□□ 0.16
Upf1-202ENSMUST00000215817 Pbx3O35317 434 aa16.07■□□□□ 0.16
Upf1-202ENSMUST00000215817 Slc8a1P70414 970 aa16.07■□□□□ 0.16
Upf1-202ENSMUST00000215817 Hpcal4Q8BGZ1 191 aa16.07■□□□□ 0.16
Upf1-202ENSMUST00000215817 Ssx2ipQ8VC66 615 aa16.07■□□□□ 0.16
Upf1-202ENSMUST00000215817 Tsc1Q9EP53 1161 aa16.07■□□□□ 0.16
Upf1-202ENSMUST00000215817 Cacng4Q9JJV4 327 aa16.07■□□□□ 0.16
Upf1-202ENSMUST00000215817 Zfp990B1AVN5 605 aa16.07■□□□□ 0.16
Upf1-202ENSMUST00000215817 Serpinb9O08797 374 aa16.07■□□□□ 0.16
Upf1-202ENSMUST00000215817 SftpbP50405 377 aa16.07■□□□□ 0.16
Upf1-202ENSMUST00000215817 Znf865Q3U3I9 1058 aa16.07■□□□□ 0.16
Upf1-202ENSMUST00000215817 Tdpoz3Q717B4 365 aa16.07■□□□□ 0.16
Upf1-202ENSMUST00000215817 RbakQ8BQC8 711 aa16.07■□□□□ 0.16
Upf1-202ENSMUST00000215817 Ppp2r2dQ925E7 453 aa16.07■□□□□ 0.16
Upf1-202ENSMUST00000215817 Rin2Q9D684 903 aa16.07■□□□□ 0.16
Upf1-202ENSMUST00000215817 Prl2b1Q9DAZ2 228 aa16.07■□□□□ 0.16
Upf1-202ENSMUST00000215817 LactbQ9EP89 551 aa16.07■□□□□ 0.16
Upf1-202ENSMUST00000215817 Zscan4dA7KBS4 506 aa16.07■□□□□ 0.16
Upf1-202ENSMUST00000215817 SelenovD3YXG1 328 aa16.07■□□□□ 0.16
Upf1-202ENSMUST00000215817 Scp2P32020 547 aaKnown RBP16.07■□□□□ 0.16
Upf1-202ENSMUST00000215817 Cdc25cP48967 447 aa16.07■□□□□ 0.16
Upf1-202ENSMUST00000215817 Atp8a1P70704 1164 aa16.07■□□□□ 0.16
Upf1-202ENSMUST00000215817 Zscan4fQ3URS2 506 aa16.07■□□□□ 0.16
Upf1-202ENSMUST00000215817 Abi3bpQ59IW6 1179 aa16.07■□□□□ 0.16
Upf1-202ENSMUST00000215817 Styk1Q6J9G1 429 aa16.07■□□□□ 0.16
Retrieved 100 of 22,080 RNA–protein pairs in 42.7 ms