RNA–Protein interactions for RNA: ENSMUST00000113707.8

Tpm1-216, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-216ENSMUST00000113707 Rpa3Q9CQ71 121 aa27.17■■□□□ 1.94
Tpm1-216ENSMUST00000113707 3830403N18RikQ9D6C3 208 aa27.17■■□□□ 1.94
Tpm1-216ENSMUST00000113707 Ms4a14A0A087WSD2 1232 aa27.16■■□□□ 1.94
Tpm1-216ENSMUST00000113707 IqccA2ADZ8 418 aa27.16■■□□□ 1.94
Tpm1-216ENSMUST00000113707 E9QMW4 1145 aa27.16■■□□□ 1.94
Tpm1-216ENSMUST00000113707 PdgfraP26618 1089 aa27.16■■□□□ 1.94
Tpm1-216ENSMUST00000113707 Hspa9P38647 679 aaKnown RBP27.16■■□□□ 1.94
Tpm1-216ENSMUST00000113707 RalaP63321 206 aa27.16■■□□□ 1.94
Tpm1-216ENSMUST00000113707 Ndst1Q3UHN9 882 aa27.16■■□□□ 1.94
Tpm1-216ENSMUST00000113707 Gm4952Q5FW57 296 aa27.16■■□□□ 1.94
Tpm1-216ENSMUST00000113707 Mpp4Q6P7F1 635 aa27.16■■□□□ 1.94
Tpm1-216ENSMUST00000113707 Nek5Q7TSC3 627 aa27.16■■□□□ 1.94
Tpm1-216ENSMUST00000113707 Spats2Q8K1N4 545 aaKnown RBP27.16■■□□□ 1.94
Tpm1-216ENSMUST00000113707 Olfr30Q8VGD8 315 aa27.16■■□□□ 1.94
Tpm1-216ENSMUST00000113707 DarsQ922B2 501 aaKnown RBP27.16■■□□□ 1.94
Tpm1-216ENSMUST00000113707 PfkpQ9WUA3 784 aaKnown RBP27.16■■□□□ 1.94
Tpm1-216ENSMUST00000113707 Lipo2D3YY49 398 aa27.15■■□□□ 1.94
Tpm1-216ENSMUST00000113707 Evi5P97366 809 aa27.15■■□□□ 1.94
Tpm1-216ENSMUST00000113707 Ptcd3Q14C51 685 aaKnown RBP27.15■■□□□ 1.94
Tpm1-216ENSMUST00000113707 Kdm7aQ3UWM4 940 aa27.15■■□□□ 1.94
Tpm1-216ENSMUST00000113707 Tcf4Q60722 670 aa27.15■■□□□ 1.94
Tpm1-216ENSMUST00000113707 Traf3Q60803 567 aa27.15■■□□□ 1.94
Tpm1-216ENSMUST00000113707 Aldh5a1Q8BWF0 523 aa27.15■■□□□ 1.94
Tpm1-216ENSMUST00000113707 Ankrd54Q91WK7 299 aa27.15■■□□□ 1.94
Tpm1-216ENSMUST00000113707 Smc6Q924W5 1097 aa27.15■■□□□ 1.94
Tpm1-216ENSMUST00000113707 Trim54Q9ERP3 366 aa27.15■■□□□ 1.94
Tpm1-216ENSMUST00000113707 Myh10Q61879 1976 aaKnown RBP27.15■■□□□ 1.94
Tpm1-216ENSMUST00000113707 Gm12800B1AUV4 484 aa27.15■■□□□ 1.94
Tpm1-216ENSMUST00000113707 Lrrc73B2RWC4 316 aa27.15■■□□□ 1.94
Tpm1-216ENSMUST00000113707 Gm12794L7MTS5 483 aa27.15■■□□□ 1.94
Tpm1-216ENSMUST00000113707 AlbP07724 608 aa27.15■■□□□ 1.94
Tpm1-216ENSMUST00000113707 Sox8Q04886 464 aa27.15■■□□□ 1.94
Tpm1-216ENSMUST00000113707 Bbof1Q3V079 533 aa27.15■■□□□ 1.94
Tpm1-216ENSMUST00000113707 Olfr1046Q7TR79 316 aa27.15■■□□□ 1.94
Tpm1-216ENSMUST00000113707 Tbc1d10bQ8BHL3 798 aa27.15■■□□□ 1.94
Tpm1-216ENSMUST00000113707 Nlrp4aQ8BU40 982 aa27.15■■□□□ 1.94
Tpm1-216ENSMUST00000113707 Tmem174Q9DCX7 243 aa27.15■■□□□ 1.94
Tpm1-216ENSMUST00000113707 Ddx24Q9ESV0 857 aaKnown RBP27.15■■□□□ 1.94
Tpm1-216ENSMUST00000113707 Pck1Q9Z2V4 622 aa27.15■■□□□ 1.94
Tpm1-216ENSMUST00000113707 Ppef1O35655 650 aa27.14■■□□□ 1.94
Tpm1-216ENSMUST00000113707 Tspyl1O88852 379 aa27.14■■□□□ 1.94
Tpm1-216ENSMUST00000113707 Rasgrf1P27671 1262 aa27.14■■□□□ 1.94
Tpm1-216ENSMUST00000113707 Gjb3P28231 270 aa27.14■■□□□ 1.94
Tpm1-216ENSMUST00000113707 Ctnnd1P30999 938 aaKnown RBP27.14■■□□□ 1.94
Tpm1-216ENSMUST00000113707 Sesn2P58043 480 aa27.14■■□□□ 1.94
Tpm1-216ENSMUST00000113707 Rgs9bpQ148R9 237 aa27.14■■□□□ 1.94
Tpm1-216ENSMUST00000113707 Tmem45aQ60774 273 aa27.14■■□□□ 1.94
Tpm1-216ENSMUST00000113707 Cd300aQ6SJQ0 318 aa27.14■■□□□ 1.94
Tpm1-216ENSMUST00000113707 Fam43aQ8BUP8 424 aa27.14■■□□□ 1.94
Tpm1-216ENSMUST00000113707 Svs3bQ8BZH8 265 aa27.14■■□□□ 1.94
Tpm1-216ENSMUST00000113707 Ccdc134Q8C7V8 229 aa27.14■■□□□ 1.94
Tpm1-216ENSMUST00000113707 Cog1Q9Z160 980 aa27.14■■□□□ 1.94
Tpm1-216ENSMUST00000113707 Ggt5Q9Z2A9 573 aa27.14■■□□□ 1.94
Tpm1-216ENSMUST00000113707 Edil3O35474 480 aa27.13■■□□□ 1.93
Tpm1-216ENSMUST00000113707 HelqQ2VPA6 1069 aa27.13■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Papd5Q68ED3 633 aaKnown RBP27.13■■□□□ 1.93
Tpm1-216ENSMUST00000113707 HpseQ6YGZ1 535 aa27.13■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Lrfn2Q80TG9 788 aa27.13■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Pcdhb1Q91Y08 818 aa27.13■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Themis2Q91YX0 663 aa27.13■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Dydc1Q9D9T0 175 aa27.13■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Ftsj3Q9DBE9 838 aaKnown RBP27.13■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Dnajb7Q9QYI8 312 aa27.13■■□□□ 1.93
Tpm1-216ENSMUST00000113707 PrkchP23298 683 aa27.13■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Dpep1P31428 410 aa27.13■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Cops2P61202 443 aaKnown RBP27.13■■□□□ 1.93
Tpm1-216ENSMUST00000113707 SobpQ0P5V2 864 aa27.13■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Echdc2Q3TLP5 296 aa27.13■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Spout1Q3UHX9 385 aaKnown RBP27.13■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Tars2Q3UQ84 723 aaKnown RBP27.13■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Ccdc117Q6PB51 277 aa27.13■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Fam102aQ78T81 392 aa27.13■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Slitrk1Q810C1 696 aa27.13■■□□□ 1.93
Tpm1-216ENSMUST00000113707 GnsQ8BFR4 544 aa27.13■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Anapc5Q8BTZ4 740 aa27.13■■□□□ 1.93
Tpm1-216ENSMUST00000113707 P3h4Q8K2B0 443 aa27.13■■□□□ 1.93
Tpm1-216ENSMUST00000113707 B4galt3Q91YY2 395 aa27.13■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Fam49bQ921M7 324 aa27.13■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Snx24Q9CRB0 169 aa27.13■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Trpv2Q9WTR1 756 aa27.13■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Gm5926E9PWJ8 236 aa27.12■■□□□ 1.93
Tpm1-216ENSMUST00000113707 EnahQ03173 802 aa27.12■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Znf583Q3V080 568 aa27.12■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Gm10488Q4KL05 212 aa27.12■■□□□ 1.93
Tpm1-216ENSMUST00000113707 CyldQ80TQ2 952 aa27.12■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Rufy1Q8BIJ7 712 aa27.12■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Ttc39bQ8BYY4 617 aa27.12■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Acbd6Q9D061 282 aa27.12■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Zfr2E9Q5M4 874 aa27.11■■□□□ 1.93
Tpm1-216ENSMUST00000113707 PostnQ62009 838 aa27.11■■□□□ 1.93
Tpm1-216ENSMUST00000113707 AmphQ7TQF7 686 aa27.11■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Cct8l1Q80YT3 562 aa27.11■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Fbxw21Q8BI38 468 aa27.11■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Cfap36Q8C6E0 343 aa27.11■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Lonp1Q8CGK3 949 aaKnown RBP27.11■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Ago3Q8CJF9 860 aa27.11■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Them5Q9CQJ0 248 aa27.11■■□□□ 1.93
Tpm1-216ENSMUST00000113707 6030498E09RikB1AX85 169 aa27.1■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Zfp597E9Q6S0 419 aa27.1■■□□□ 1.93
Tpm1-216ENSMUST00000113707 Gm4788E9Q8B5 879 aa27.1■■□□□ 1.93
Retrieved 100 of 22,080 RNA–protein pairs in 22.1 ms