RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 Atp5oQ9DB20 213 aaKnown RBP14.53□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Naaladl2A0A0N4SUJ3 795 aa14.53□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Rrn3B2RS91 656 aa14.53□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Arhgef26D3YYY8 869 aa14.53□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Gm17019K7N6W5 255 aa14.53□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Xirp1O70373 1129 aa14.53□□□□□ -0.08
Col3a1-201ENSMUST00000087883 PkmP52480 531 aaKnown RBP14.53□□□□□ -0.08
Col3a1-201ENSMUST00000087883 S100gP97816 79 aa14.53□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Zcwpw1Q6IR42 630 aa14.53□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Tdpoz3Q717B4 365 aa14.53□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Tas2r131Q7M708 310 aa14.53□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Smndc1Q8BGT7 238 aaKnown RBP14.53□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Uba3Q8C878 462 aa14.53□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Glra3Q91XP5 464 aa14.53□□□□□ -0.08
Col3a1-201ENSMUST00000087883 PawrQ925B0 333 aa14.53□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Gm21083A0A0G2JFD5 256 aa14.52□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Pramel3A2AHA7 463 aa14.52□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Gm7903A2AWL1 463 aa14.52□□□□□ -0.08
Col3a1-201ENSMUST00000087883 AV320801A2AWL3 467 aa14.52□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Gm15023L7MUB4 467 aa14.52□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Hmx1O70218 332 aa14.52□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Tekt4Q149S1 447 aa14.52□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Otud6aQ6IE21 290 aa14.52□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Sfr1Q8BP27 319 aa14.52□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Fbxl13Q8CDU4 790 aa14.52□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Dnajc28Q8VCE1 385 aa14.52□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Mtmr4Q91XS1 1190 aa14.52□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Plagl2Q925T4 496 aa14.52□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Ltb4r2Q9JJL9 360 aa14.52□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Fam205aA2APU8 1308 aa14.52□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Gm8257E9Q8R3 264 aa14.52□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Orm2P07361 207 aa14.52□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Tal1P22091 329 aa14.52□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Zc3hav1Q3UPF5 946 aaKnown RBP14.52□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Krr1Q8BGA5 380 aaKnown RBP14.52□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Zfp398Q8BV16 643 aa14.52□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Fam49bQ921M7 324 aa14.52□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Mageb3Q9D2H4 330 aa14.52□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Cep152A2AUM9 1736 aaKnown RBP14.52□□□□□ -0.08
Col3a1-201ENSMUST00000087883 Zfp882E9Q4R4 555 aa14.52□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Gm10436L7N1Y3 520 aa14.52□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Epha2Q03145 977 aa14.52□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Zhx2Q8C0C0 836 aaKnown RBP14.52□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Ldlrap1Q8C142 308 aa14.52□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Hormad1Q9D5T7 392 aa14.52□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Kat2bQ9JHD1 813 aa14.52□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Olfr292F8VQ84 308 aa14.52□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Angpt2O35608 496 aa14.52□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Ptpn5P54830 541 aa14.52□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Mars2Q499X9 586 aaKnown RBP14.52□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Tas2r134Q7TQB0 298 aa14.52□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Nsun6Q7TS68 476 aa14.52□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Znf879Q8BI99 563 aa14.52□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Kbtbd13Q8C828 458 aa14.52□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Ddx20Q9JJY4 825 aaKnown RBP14.52□□□□□ -0.09
Col3a1-201ENSMUST00000087883 TxnP10639 105 aaKnown RBP14.52□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Serpinh1P19324 417 aaKnown RBP14.52□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Gcnt1Q09324 428 aa14.52□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Q3UJP5 209 aa14.52□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Tigd5Q499M4 642 aa14.52□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Gstt1Q64471 240 aa14.52□□□□□ -0.09
Col3a1-201ENSMUST00000087883 WhrnQ80VW5 918 aa14.52□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Usp1Q8BJQ2 784 aa14.52□□□□□ -0.09
Col3a1-201ENSMUST00000087883 GanQ8CA72 597 aa14.52□□□□□ -0.09
Col3a1-201ENSMUST00000087883 OplahQ8K010 1288 aa14.52□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Olfr805Q8VFI4 319 aa14.52□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Gyg1Q9R062 333 aa14.52□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Tmem132bF7BAB2 1078 aa14.51□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Zfp512bQ6PHP4 879 aa14.51□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Ppm1nQ8BGL1 404 aa14.51□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Tbl3Q8C4J7 801 aaKnown RBP14.51□□□□□ -0.09
Col3a1-201ENSMUST00000087883 TbcelQ8C5W3 424 aa14.51□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Stau2Q8CJ67 570 aaKnown RBP14.51□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Haus8Q99L00 373 aa14.51□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Ppp1r3aQ99MR9 1089 aa14.51□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Tagln3Q9R1Q8 199 aa14.51□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Atp6v1g2Q9WTT4 118 aa14.51□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Zfp984A2A7A2 547 aa14.51□□□□□ -0.09
Col3a1-201ENSMUST00000087883 MafgO54790 162 aa14.51□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Psma3O70435 255 aa14.51□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Scd1P13516 355 aa14.51□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Shc3Q61120 474 aa14.51□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Dedd2Q8QZV0 330 aa14.51□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Ten1Q9D7K2 161 aa14.51□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Gm10134F6ZQC6 126 aa14.51□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Ap2a2P17427 938 aaKnown RBP14.51□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Sult1e1P49891 295 aa14.51□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Cul4aQ3TCH7 759 aa14.51□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Znf579Q80VM4 562 aa14.51□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Dact1Q8R4A3 778 aa14.51□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Trex1Q91XB0 314 aa14.51□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Cstf3Q99LI7 717 aaKnown RBP14.51□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Map3k20Q9ESL4 802 aaKnown RBP14.51□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Nid2O88322 1403 aa14.51□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Sox6P40645 827 aa14.51□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Tspan14Q8QZY6 270 aa14.51□□□□□ -0.09
Col3a1-201ENSMUST00000087883 GrapQ9CX99 217 aa14.51□□□□□ -0.09
Col3a1-201ENSMUST00000087883 GOLGA7BQ9D428 167 aa14.51□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Fxr2Q9WVR4 673 aaKnown RBP14.51□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Hecw1Q8K4P8 1604 aa14.51□□□□□ -0.09
Retrieved 100 of 22,080 RNA–protein pairs in 22.8 ms