RNA–Protein interactions for RNA: ENSMUST00000053856.5

Pcdhb17-201, Transcript of MCG141290, mousemouse

APPRIS P1 BASIC

Gene Pcdhb17, Length 4,660 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17-201ENSMUST00000053856 Mif4gdQ3UBZ5 222 aa11.84□□□□□ -0.51
Pcdhb17-201ENSMUST00000053856 Frmd5Q6P5H6 517 aa11.84□□□□□ -0.51
Pcdhb17-201ENSMUST00000053856 Slitrk3Q810B9 980 aa11.84□□□□□ -0.51
Pcdhb17-201ENSMUST00000053856 Ccdc40Q8BI79 1192 aa11.84□□□□□ -0.51
Pcdhb17-201ENSMUST00000053856 Q8VDP2 222 aa11.84□□□□□ -0.51
Pcdhb17-201ENSMUST00000053856 BsndQ8VIM4 307 aa11.84□□□□□ -0.51
Pcdhb17-201ENSMUST00000053856 Scrn1Q9CZC8 414 aa11.84□□□□□ -0.51
Pcdhb17-201ENSMUST00000053856 Pgm1Q9D0F9 562 aa11.84□□□□□ -0.51
Pcdhb17-201ENSMUST00000053856 Tssc4Q9JHE7 317 aa11.84□□□□□ -0.51
Pcdhb17-201ENSMUST00000053856 Ercc4Q9QZD4 917 aa11.84□□□□□ -0.51
Pcdhb17-201ENSMUST00000053856 Mup10A2BIN1 180 aa11.84□□□□□ -0.51
Pcdhb17-201ENSMUST00000053856 Mup14A2CEK7 180 aa11.84□□□□□ -0.51
Pcdhb17-201ENSMUST00000053856 Mup19A9C497 187 aa11.84□□□□□ -0.51
Pcdhb17-201ENSMUST00000053856 Mup15A9R9W0 180 aa11.84□□□□□ -0.51
Pcdhb17-201ENSMUST00000053856 Mup17B5X0G2 180 aa11.84□□□□□ -0.51
Pcdhb17-201ENSMUST00000053856 Mup8E9PVW0 235 aa11.84□□□□□ -0.51
Pcdhb17-201ENSMUST00000053856 Mup7E9QA79 235 aa11.84□□□□□ -0.51
Pcdhb17-201ENSMUST00000053856 Zfp212G3X8R7 492 aa11.84□□□□□ -0.51
Pcdhb17-201ENSMUST00000053856 Ppargc1aO70343 797 aa11.84□□□□□ -0.51
Pcdhb17-201ENSMUST00000053856 Mup6P02762 180 aa11.84□□□□□ -0.51
Pcdhb17-201ENSMUST00000053856 Mup1P11588 180 aa11.84□□□□□ -0.51
Pcdhb17-201ENSMUST00000053856 Mup2P11589 180 aa11.84□□□□□ -0.51
Pcdhb17-201ENSMUST00000053856 Sstr3P30935 428 aa11.84□□□□□ -0.51
Pcdhb17-201ENSMUST00000053856 GlrbP48168 496 aa11.84□□□□□ -0.51
Pcdhb17-201ENSMUST00000053856 Nudt1P53368 156 aa11.84□□□□□ -0.51
Pcdhb17-201ENSMUST00000053856 Slc12a1P55014 1095 aa11.84□□□□□ -0.51
Pcdhb17-201ENSMUST00000053856 Vps72Q62481 368 aa11.84□□□□□ -0.51
Pcdhb17-201ENSMUST00000053856 Cdc14aQ6GQT0 603 aa11.84□□□□□ -0.51
Pcdhb17-201ENSMUST00000053856 Dnajc6Q80TZ3 938 aa11.84□□□□□ -0.51
Pcdhb17-201ENSMUST00000053856 Tasp1Q8R1G1 420 aa11.84□□□□□ -0.51
Pcdhb17-201ENSMUST00000053856 Ccdc92Q8VDN4 314 aa11.84□□□□□ -0.51
Pcdhb17-201ENSMUST00000053856 Ube2sQ921J4 223 aa11.84□□□□□ -0.51
Pcdhb17-201ENSMUST00000053856 Coro7Q9D2V7 922 aa11.84□□□□□ -0.51
Pcdhb17-201ENSMUST00000053856 Gtf3c6Q9D8P7 227 aa11.84□□□□□ -0.51
Pcdhb17-201ENSMUST00000053856 Rabgef1Q9JM13 491 aa11.84□□□□□ -0.51
Pcdhb17-201ENSMUST00000053856 Ndufs6P52503 116 aa11.84□□□□□ -0.51
Pcdhb17-201ENSMUST00000053856 Tmem232Q5K6N0 675 aa11.84□□□□□ -0.51
Pcdhb17-201ENSMUST00000053856 Ppm1nQ8BGL1 404 aa11.84□□□□□ -0.51
Pcdhb17-201ENSMUST00000053856 Ints6lQ8BND4 861 aa11.84□□□□□ -0.51
Pcdhb17-201ENSMUST00000053856 Suds3Q8BR65 328 aa11.84□□□□□ -0.51
Pcdhb17-201ENSMUST00000053856 Acsf2Q8VCW8 615 aa11.84□□□□□ -0.51
Pcdhb17-201ENSMUST00000053856 HnrnprQ8VHM5 632 aaKnown RBP11.84□□□□□ -0.51
Pcdhb17-201ENSMUST00000053856 Hdac11Q91WA3 347 aa11.84□□□□□ -0.51
Pcdhb17-201ENSMUST00000053856 GOLGA7BQ9D428 167 aa11.84□□□□□ -0.51
Pcdhb17-201ENSMUST00000053856 Iqcf1Q9D9K8 182 aa11.84□□□□□ -0.51
Pcdhb17-201ENSMUST00000053856 Tob2Q9JM55 345 aa11.84□□□□□ -0.51
Pcdhb17-201ENSMUST00000053856 Pcsk1nQ9QXV0 258 aa11.84□□□□□ -0.51
Pcdhb17-201ENSMUST00000053856 Apobec2Q9WV35 224 aa11.84□□□□□ -0.51
Pcdhb17-201ENSMUST00000053856 Tnrc6bQ8BKI2 1810 aaKnown RBP11.83□□□□□ -0.51
Pcdhb17-201ENSMUST00000053856 Pde9aO70628 534 aa11.83□□□□□ -0.52
Pcdhb17-201ENSMUST00000053856 Acvr2bP27040 536 aa11.83□□□□□ -0.52
Pcdhb17-201ENSMUST00000053856 H2afxP27661 143 aaKnown RBP11.83□□□□□ -0.52
Pcdhb17-201ENSMUST00000053856 Zfp956Q3UZY6 572 aa11.83□□□□□ -0.52
Pcdhb17-201ENSMUST00000053856 XpaQ64267 272 aa11.83□□□□□ -0.52
Pcdhb17-201ENSMUST00000053856 Otub1Q7TQI3 271 aa11.83□□□□□ -0.52
Pcdhb17-201ENSMUST00000053856 Olfr698Q7TRN4 311 aa11.83□□□□□ -0.52
Pcdhb17-201ENSMUST00000053856 Tp53bp2Q8CG79 1128 aa11.83□□□□□ -0.52
Pcdhb17-201ENSMUST00000053856 Havcr2Q8VIM0 281 aa11.83□□□□□ -0.52
Pcdhb17-201ENSMUST00000053856 Dach2Q925Q8 634 aa11.83□□□□□ -0.52
Pcdhb17-201ENSMUST00000053856 ArhgdiaQ99PT1 204 aaKnown RBP11.83□□□□□ -0.52
Pcdhb17-201ENSMUST00000053856 Ddit4Q9D3F7 229 aa11.83□□□□□ -0.52
Pcdhb17-201ENSMUST00000053856 Poc5Q9DBS8 558 aa11.83□□□□□ -0.52
Pcdhb17-201ENSMUST00000053856 Rpf2Q9JJ80 306 aaKnown RBP11.83□□□□□ -0.52
Pcdhb17-201ENSMUST00000053856 Myom1Q62234 1667 aaKnown RBP11.83□□□□□ -0.52
Pcdhb17-201ENSMUST00000053856 Zscan4-ps3A0A1B0GRH6 506 aa11.83□□□□□ -0.52
Pcdhb17-201ENSMUST00000053856 Zscan4-ps2A0A1C7CYU6 506 aa11.83□□□□□ -0.52
Pcdhb17-201ENSMUST00000053856 Ccnd2P30280 289 aa11.83□□□□□ -0.52
Pcdhb17-201ENSMUST00000053856 4930430A15RikQ05AC5 485 aa11.83□□□□□ -0.52
Pcdhb17-201ENSMUST00000053856 Stt3bQ3TDQ1 823 aa11.83□□□□□ -0.52
Pcdhb17-201ENSMUST00000053856 Gsdmc4Q3TR54 480 aa11.83□□□□□ -0.52
Pcdhb17-201ENSMUST00000053856 Trim75Q3UWZ0 467 aa11.83□□□□□ -0.52
Pcdhb17-201ENSMUST00000053856 Mpzl3Q3V3F6 237 aa11.83□□□□□ -0.52
Pcdhb17-201ENSMUST00000053856 Leng8Q8CBY3 785 aaKnown RBP11.83□□□□□ -0.52
Pcdhb17-201ENSMUST00000053856 Ndufs1Q91VD9 727 aaKnown RBP11.83□□□□□ -0.52
Pcdhb17-201ENSMUST00000053856 Zmynd10Q99ML0 440 aa11.83□□□□□ -0.52
Pcdhb17-201ENSMUST00000053856 Tmem39aQ9CYC3 486 aa11.83□□□□□ -0.52
Pcdhb17-201ENSMUST00000053856 Ap2b1Q9DBG3 937 aa11.83□□□□□ -0.52
Pcdhb17-201ENSMUST00000053856 Il18rapQ9Z2B1 614 aa11.83□□□□□ -0.52
Pcdhb17-201ENSMUST00000053856 Zfp984A2A7A2 547 aa11.83□□□□□ -0.52
Pcdhb17-201ENSMUST00000053856 Slc35g2D3YVE8 412 aa11.83□□□□□ -0.52
Pcdhb17-201ENSMUST00000053856 Sema4dO09126 861 aa11.83□□□□□ -0.52
Pcdhb17-201ENSMUST00000053856 Man1a2P39098 641 aa11.83□□□□□ -0.52
Pcdhb17-201ENSMUST00000053856 Arl14Q3SXC5 192 aa11.83□□□□□ -0.52
Pcdhb17-201ENSMUST00000053856 Lag3Q61790 521 aa11.83□□□□□ -0.52
Pcdhb17-201ENSMUST00000053856 PostnQ62009 838 aa11.83□□□□□ -0.52
Pcdhb17-201ENSMUST00000053856 Gm7247Q6UY52 187 aa11.83□□□□□ -0.52
Pcdhb17-201ENSMUST00000053856 Vmn2r43Q80Z08 845 aa11.83□□□□□ -0.52
Pcdhb17-201ENSMUST00000053856 Utp6Q8VCY6 597 aaKnown RBP11.83□□□□□ -0.52
Pcdhb17-201ENSMUST00000053856 Uap1Q91YN5 522 aa11.83□□□□□ -0.52
Pcdhb17-201ENSMUST00000053856 Atpaf2Q91YY4 289 aa11.83□□□□□ -0.52
Pcdhb17-201ENSMUST00000053856 Cdk5rap3Q99LM2 503 aa11.83□□□□□ -0.52
Pcdhb17-201ENSMUST00000053856 Pkp3Q9QY23 797 aa11.83□□□□□ -0.52
Pcdhb17-201ENSMUST00000053856 Zmym2Q9CU65 1376 aa11.83□□□□□ -0.52
Pcdhb17-201ENSMUST00000053856 Zmynd8A2A484 1235 aaKnown RBP11.83□□□□□ -0.52
Pcdhb17-201ENSMUST00000053856 Gm5795E9PZN8 263 aa11.83□□□□□ -0.52
Pcdhb17-201ENSMUST00000053856 Gm3460E9QAI8 215 aa11.83□□□□□ -0.52
Pcdhb17-201ENSMUST00000053856 PgfP49764 158 aa11.83□□□□□ -0.52
Pcdhb17-201ENSMUST00000053856 Oscp1Q8BHW2 379 aa11.83□□□□□ -0.52
Pcdhb17-201ENSMUST00000053856 OafQ8QZR4 282 aa11.83□□□□□ -0.52
Pcdhb17-201ENSMUST00000053856 Sgms1Q8VCQ6 419 aa11.83□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 21.5 ms