RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 XntrpcF8VQM8 1264 aa7.28□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Trappc3O55013 180 aa7.28□□□□□ -1.24
Bdnf-201ENSMUST00000053317 mt-Co3P00416 261 aa7.28□□□□□ -1.24
Bdnf-201ENSMUST00000053317 PrnpP04925 254 aa7.28□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Serpinh1P19324 417 aaKnown RBP7.28□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Ptpn22P29352 802 aa7.28□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Hoxd13P70217 339 aa7.28□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Frmd8Q3UFK8 466 aa7.28□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Scube3Q66PY1 993 aa7.28□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Asic3Q6X1Y6 530 aa7.28□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Olfr670Q7TRP3 312 aa7.28□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Lrsam1Q80ZI6 727 aa7.28□□□□□ -1.24
Bdnf-201ENSMUST00000053317 CarfQ8VHI4 689 aa7.28□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Twf1Q91YR1 350 aaKnown RBP7.28□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Necab2Q91ZP9 389 aa7.28□□□□□ -1.24
Bdnf-201ENSMUST00000053317 4930449I24RikQ9D5E3 319 aa7.28□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Mrpl2Q9D773 306 aaKnown RBP7.28□□□□□ -1.24
Bdnf-201ENSMUST00000053317 PdclQ9DBX2 301 aa7.28□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Rab13Q9DD03 202 aa7.28□□□□□ -1.24
Bdnf-201ENSMUST00000053317 NfkbizQ9EST8 728 aa7.28□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Egfl6Q9JJZ5 550 aa7.28□□□□□ -1.24
Bdnf-201ENSMUST00000053317 CluhQ5SW19 1315 aa7.28□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Vmn2r15L7N2A0 855 aa7.28□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Odc1P00860 461 aa7.28□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Xrcc5P27641 732 aa7.28□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Kcnj2P35561 428 aa7.28□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Pcbp1P60335 356 aaKnown RBP7.28□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Pou6f1Q07916 301 aa7.28□□□□□ -1.24
Bdnf-201ENSMUST00000053317 March9Q3TZ87 348 aa7.28□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Dnph1Q80VJ3 173 aa7.28□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Arhgap18Q8K0Q5 663 aa7.28□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Slc13a3Q91Y63 600 aa7.28□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Rilpl2Q99LE1 197 aa7.28□□□□□ -1.24
Bdnf-201ENSMUST00000053317 StambpQ9CQ26 424 aa7.28□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Kif12Q9D2Z8 642 aa7.28□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Rin2Q9D684 903 aa7.28□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Eef1akmt2Q9D853 244 aa7.28□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Cdc42ep4Q9JM96 349 aaKnown RBP7.28□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Gm4756A0A140LIS8 335 aa7.27□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Rhox3cA2AWM0 215 aa7.27□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Mocs3A2BDX3 460 aaKnown RBP7.27□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Rabgap1lA6H6A9 815 aa7.27□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Cdr1E9Q0B4 517 aa7.27□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Rhox3hL7MU37 215 aa7.27□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Krt8P11679 490 aaKnown RBP7.27□□□□□ -1.24
Bdnf-201ENSMUST00000053317 PkmP52480 531 aaKnown RBP7.27□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Nub1P54729 614 aa7.27□□□□□ -1.24
Bdnf-201ENSMUST00000053317 YwhaeP62259 255 aaKnown RBP7.27□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Myadml2Q08AU7 307 aa7.27□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Prss55Q14BX2 321 aa7.27□□□□□ -1.24
Bdnf-201ENSMUST00000053317 MlxipQ2VPU4 917 aa7.27□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Fam8a1Q3URQ4 399 aa7.27□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Rhox3aQ4TU90 215 aa7.27□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Nlrp4fQ66X05 959 aa7.27□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Dhx40Q6PE54 779 aaKnown RBP7.27□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Proser3Q7TSA6 634 aa7.27□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Pcsk9Q80W65 694 aa7.27□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Arhgap11aQ80Y19 987 aa7.27□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Q80ZQ3 298 aa7.27□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Rab44Q8CB87 725 aa7.27□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Kcnk13Q8R1P5 405 aa7.27□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Ubxn1Q922Y1 297 aa7.27□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Pramef12Q9D2F1 463 aa7.27□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Dctpp1Q9QY93 170 aa7.27□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Rnf103Q9R1W3 683 aa7.27□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Tulp1Q9Z273 543 aa7.27□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Elf4Q9Z2U4 655 aa7.27□□□□□ -1.24
Bdnf-201ENSMUST00000053317 Zscan4-ps3A0A1B0GRH6 506 aa7.27□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Gm3002E9PW72 216 aa7.27□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Epb41l4aP52963 686 aa7.27□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Rasa2P58069 847 aa7.27□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Polr2fP61219 127 aa7.27□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Tubb4bP68372 445 aaKnown RBP7.27□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Stkld1Q80YS9 662 aa7.27□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Ostm1Q8BGT0 338 aa7.27□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Eif2aQ8BJW6 581 aaKnown RBP7.27□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Spon2Q8BMS2 330 aa7.27□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Tlr3Q99MB1 905 aa7.27□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Filip1Q9CS72 1211 aa7.27□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Micu3Q9CTY5 523 aa7.27□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Mtif3Q9CZD5 276 aa7.27□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Serpina9Q9D7D2 418 aa7.27□□□□□ -1.25
Bdnf-201ENSMUST00000053317 TsaccQ9DA44 124 aa7.27□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Scyl3Q9DBQ7 735 aa7.27□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Ppfia4B8QI36 1187 aa7.27□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Gm4788E9Q8B5 879 aa7.27□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Col6a1Q04857 1025 aa7.27□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Rbm20Q3UQS8 1199 aaKnown RBP7.27□□□□□ -1.25
Bdnf-201ENSMUST00000053317 SlmapQ3URD3 845 aa7.27□□□□□ -1.25
Bdnf-201ENSMUST00000053317 MlipQ5FW52 269 aa7.27□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Styk1Q6J9G1 429 aa7.27□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Tbc1d31Q6NXY1 996 aa7.27□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Gpr142Q7TQN9 365 aa7.27□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Haus4Q8BFT2 363 aa7.27□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Psmd6Q99JI4 389 aa7.27□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Klc4Q9DBS5 619 aa7.27□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Cyp39a1Q9JKJ9 470 aa7.27□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Dock2Q8C3J5 1828 aa7.27□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Gm10110D3Z5M2 615 aa7.27□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Sclt1G5E861 688 aa7.27□□□□□ -1.25
Retrieved 100 of 22,080 RNA–protein pairs in 16.8 ms