RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Lsm8Q6ZWM4 96 aaKnown RBP12.42□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Tas2r115Q7M719 310 aa12.42□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Baiap2l2Q80Y61 522 aa12.42□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Tmem220Q8BP07 167 aa12.42□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Ano4Q8C5H1 955 aa12.42□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Mmgt1Q8K273 131 aaKnown RBP12.42□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Mlc1Q8VHK5 382 aa12.42□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Atpaf2Q91YY4 289 aa12.42□□□□□ -0.42
Pcif1-201ENSMUST00000041643 GarsQ9CZD3 729 aaKnown RBP12.42□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Sapcd2Q9D818 391 aa12.42□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Stk4Q9JI11 487 aa12.42□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Dhtkd1A2ATU0 921 aa12.42□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Kif6E9PX57 802 aa12.42□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Gm5689F6Y2A6 97 aa12.42□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Grm2Q14BI2 872 aa12.42□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Ccdc127Q3TC33 260 aa12.42□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Pramel7Q810Y8 479 aa12.42□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Pdk1Q8BFP9 434 aaKnown RBP12.42□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Lztr1Q9CQ33 837 aa12.42□□□□□ -0.42
Pcif1-201ENSMUST00000041643 1700109H08RikQ9D9C0 210 aa12.42□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Neu2Q9JMH3 379 aa12.42□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Atp11cQ9QZW0 1129 aa12.42□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Prdm12A2AJ77 365 aa12.42□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Ifi206G3UZV2 921 aa12.42□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Nub1P54729 614 aa12.42□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Gtf2bP62915 316 aa12.42□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Atp13a5Q3TYU2 1216 aa12.42□□□□□ -0.42
Pcif1-201ENSMUST00000041643 FaxcQ3UMF9 409 aa12.42□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Fbxo39Q5NBU5 443 aa12.42□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Svs3bQ8BZH8 265 aa12.42□□□□□ -0.42
Pcif1-201ENSMUST00000041643 OplahQ8K010 1288 aa12.42□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Csde1Q91W50 798 aaKnown RBP12.42□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Zfp64Q99KE8 643 aa12.42□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Trim10Q9WUH5 489 aa12.42□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Tjp2Q9Z0U1 1167 aaKnown RBP12.42□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Kcnd2Q9Z0V2 630 aa12.42□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Ugt1a2P70691 533 aa12.42□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Ecm1Q61508 559 aa12.42□□□□□ -0.42
Pcif1-201ENSMUST00000041643 FdxrQ61578 494 aa12.42□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Ugt1a9Q62452 528 aa12.42□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Ugt1a1Q63886 535 aa12.42□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Slitrk1Q810C1 696 aa12.42□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Arhgap29Q8CGF1 1266 aa12.42□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Snx2Q9CWK8 519 aa12.42□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Ddit4Q9D3F7 229 aa12.42□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Slc2a4P14142 509 aa12.41□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Foxp2P58463 714 aa12.41□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Mpzl3Q3V3F6 237 aa12.41□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Gpatch2lQ6PE65 482 aa12.41□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Cep104Q80V31 926 aa12.41□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Eif2aQ8BJW6 581 aaKnown RBP12.41□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Leng8Q8CBY3 785 aaKnown RBP12.41□□□□□ -0.42
Pcif1-201ENSMUST00000041643 MkksQ9JI70 570 aa12.41□□□□□ -0.42
Pcif1-201ENSMUST00000041643 PnkpQ9JLV6 522 aaKnown RBP12.41□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Bmp15Q9Z0L4 392 aa12.41□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Wnk3Q80XP9 1757 aa12.41□□□□□ -0.42
Pcif1-201ENSMUST00000041643 AF366264G3X9P9 502 aa12.41□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Fam172aQ3TNH5 417 aa12.41□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Kpna1Q60960 538 aa12.41□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Olfr389Q7TRX7 312 aa12.41□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Heatr3Q8BQM4 679 aa12.41□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Lrrc14Q8VC16 493 aa12.41□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Wdr98Q8VC42 657 aa12.41□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Q922M7 232 aa12.41□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Stk33Q924X7 491 aa12.41□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Shcbp1Q9Z179 668 aa12.41□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Abca15E9PWH4 1668 aa12.41□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Trdmt1O55055 415 aa12.41□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Kcnj6P48542 425 aa12.41□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Gngt2Q61017 69 aa12.41□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Gpd2Q64521 727 aa12.41□□□□□ -0.42
Pcif1-201ENSMUST00000041643 LppQ8BFW7 613 aa12.41□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Fbxl21Q8BFZ4 434 aa12.41□□□□□ -0.42
Pcif1-201ENSMUST00000041643 FsbpQ8BKE5 299 aa12.41□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Asb7Q91ZU0 318 aa12.41□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Kif12Q9D2Z8 642 aa12.41□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Gm3424L7N298 263 aa12.41□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Gm8246M0QWX9 263 aa12.41□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Hoxc6P10629 235 aa12.41□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Phlda1Q62392 405 aa12.41□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Msantd2Q6NZR2 559 aa12.41□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Frmd5Q6P5H6 517 aa12.41□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Gm7247Q6UY52 187 aa12.41□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Zfyve28Q6ZPK7 905 aa12.41□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Chsy1Q6ZQ11 800 aa12.41□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Rassf10Q8BL43 508 aa12.41□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Dcun1d2Q8BZJ7 259 aa12.41□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Chordc1Q9D1P4 331 aaKnown RBP12.41□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Armc9Q9D2I5 817 aa12.41□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Slc40a1Q9JHI9 570 aa12.41□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Ppp2r3dQ9Z176 491 aa12.41□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Oip5A2AQ14 241 aa12.41□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Atf6F6VAN0 656 aa12.41□□□□□ -0.42
Pcif1-201ENSMUST00000041643 B020004C17RikJ3QP07 232 aa12.41□□□□□ -0.42
Pcif1-201ENSMUST00000041643 FntaQ61239 377 aa12.41□□□□□ -0.42
Pcif1-201ENSMUST00000041643 ChpfQ6IQX7 774 aa12.41□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Ticam2Q8BJQ4 232 aa12.41□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Neto2Q8BNJ6 525 aa12.41□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Tti1Q91V83 1085 aa12.41□□□□□ -0.42
Pcif1-201ENSMUST00000041643 SmtnQ921U8 923 aa12.41□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 25.8 ms