RNA–Protein interactions for RNA: ENSMUST00000041639.6

Syne1-201, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 6,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-201ENSMUST00000041639 Man1a1P45700 655 aa10.23□□□□□ -0.77
Syne1-201ENSMUST00000041639 Tmem109Q3UBX0 243 aa10.23□□□□□ -0.77
Syne1-201ENSMUST00000041639 Otub1Q7TQI3 271 aa10.23□□□□□ -0.77
Syne1-201ENSMUST00000041639 Atg4cQ811C2 458 aa10.23□□□□□ -0.77
Syne1-201ENSMUST00000041639 Nim1kQ8BHI9 436 aa10.23□□□□□ -0.77
Syne1-201ENSMUST00000041639 Phf20Q8BLG0 1010 aaKnown RBP10.23□□□□□ -0.77
Syne1-201ENSMUST00000041639 CopaQ8CIE6 1224 aaKnown RBP10.23□□□□□ -0.77
Syne1-201ENSMUST00000041639 Tjp2Q9Z0U1 1167 aaKnown RBP10.23□□□□□ -0.77
Syne1-201ENSMUST00000041639 Naaladl2A0A0N4SUJ3 795 aa10.23□□□□□ -0.77
Syne1-201ENSMUST00000041639 AspgA0JNU3 564 aa10.23□□□□□ -0.77
Syne1-201ENSMUST00000041639 Maml3D4QGC2 1135 aa10.23□□□□□ -0.77
Syne1-201ENSMUST00000041639 Wee1P47810 646 aa10.23□□□□□ -0.77
Syne1-201ENSMUST00000041639 Ndufs6P52503 116 aa10.23□□□□□ -0.77
Syne1-201ENSMUST00000041639 Prl2c1Q5SVL9 228 aa10.23□□□□□ -0.77
Syne1-201ENSMUST00000041639 Papd7Q6PB75 542 aa10.23□□□□□ -0.77
Syne1-201ENSMUST00000041639 Nyap1Q6PFX7 833 aa10.23□□□□□ -0.77
Syne1-201ENSMUST00000041639 Elac2Q80Y81 831 aaKnown RBP10.23□□□□□ -0.77
Syne1-201ENSMUST00000041639 ClmnQ8C5W0 1052 aa10.23□□□□□ -0.77
Syne1-201ENSMUST00000041639 Tada2aQ8CHV6 443 aa10.23□□□□□ -0.77
Syne1-201ENSMUST00000041639 Mill1Q8HWE7 395 aa10.23□□□□□ -0.77
Syne1-201ENSMUST00000041639 Znf426Q8R1D1 550 aa10.23□□□□□ -0.77
Syne1-201ENSMUST00000041639 Rnaseh2aQ9CWY8 301 aa10.23□□□□□ -0.77
Syne1-201ENSMUST00000041639 Gid8Q9D7M1 228 aa10.23□□□□□ -0.77
Syne1-201ENSMUST00000041639 B020011L13RikA0A087WQI7 412 aa10.23□□□□□ -0.77
Syne1-201ENSMUST00000041639 Rnf19bA2A7Q9 732 aa10.23□□□□□ -0.77
Syne1-201ENSMUST00000041639 Spin2fJ3QPU0 254 aa10.23□□□□□ -0.77
Syne1-201ENSMUST00000041639 Gprin1Q3UNH4 932 aa10.23□□□□□ -0.77
Syne1-201ENSMUST00000041639 Casc4Q6P2L7 435 aa10.23□□□□□ -0.77
Syne1-201ENSMUST00000041639 E2f7Q6S7F2 904 aa10.23□□□□□ -0.77
Syne1-201ENSMUST00000041639 Prpf18Q8BM39 342 aa10.23□□□□□ -0.77
Syne1-201ENSMUST00000041639 Q8CIL4 281 aa10.23□□□□□ -0.77
Syne1-201ENSMUST00000041639 Trappc12Q8K2L8 797 aa10.23□□□□□ -0.77
Syne1-201ENSMUST00000041639 IrgqQ8VIM9 583 aa10.23□□□□□ -0.77
Syne1-201ENSMUST00000041639 MymkQ9D1N4 221 aa10.23□□□□□ -0.77
Syne1-201ENSMUST00000041639 Gm21964A0A1W2P7S4 437 aa10.23□□□□□ -0.77
Syne1-201ENSMUST00000041639 Znf711A2ANX9 761 aa10.23□□□□□ -0.77
Syne1-201ENSMUST00000041639 Gm4307E9PZY4 289 aa10.23□□□□□ -0.77
Syne1-201ENSMUST00000041639 Gm4312K9J7E2 289 aa10.23□□□□□ -0.77
Syne1-201ENSMUST00000041639 Msh3P13705 1091 aa10.23□□□□□ -0.77
Syne1-201ENSMUST00000041639 Crabp2P22935 138 aa10.23□□□□□ -0.77
Syne1-201ENSMUST00000041639 Cd19P25918 547 aa10.23□□□□□ -0.77
Syne1-201ENSMUST00000041639 Usp4P35123 962 aa10.23□□□□□ -0.77
Syne1-201ENSMUST00000041639 RubcnlQ3TD16 648 aa10.23□□□□□ -0.77
Syne1-201ENSMUST00000041639 Ica1lQ3TY65 431 aa10.23□□□□□ -0.77
Syne1-201ENSMUST00000041639 ScinQ60604 715 aa10.23□□□□□ -0.77
Syne1-201ENSMUST00000041639 EregQ61521 162 aa10.23□□□□□ -0.77
Syne1-201ENSMUST00000041639 Vps50Q8CI71 964 aa10.23□□□□□ -0.77
Syne1-201ENSMUST00000041639 CygbQ9CX80 190 aa10.23□□□□□ -0.77
Syne1-201ENSMUST00000041639 Syf2Q9D198 242 aaKnown RBP10.23□□□□□ -0.77
Syne1-201ENSMUST00000041639 1700123K08RikQ9D991 295 aa10.23□□□□□ -0.77
Syne1-201ENSMUST00000041639 Trpc5Q9QX29 975 aa10.23□□□□□ -0.77
Syne1-201ENSMUST00000041639 Rbck1Q9WUB0 508 aa10.23□□□□□ -0.77
Syne1-201ENSMUST00000041639 Pcna-ps2A0A140T8V5 261 aa10.23□□□□□ -0.77
Syne1-201ENSMUST00000041639 Fgfr4Q03142 799 aa10.23□□□□□ -0.77
Syne1-201ENSMUST00000041639 Fbxl13Q8CDU4 790 aa10.23□□□□□ -0.77
Syne1-201ENSMUST00000041639 Unc45aQ99KD5 944 aa10.23□□□□□ -0.77
Syne1-201ENSMUST00000041639 Aox3G3X982 1335 aa10.22□□□□□ -0.77
Syne1-201ENSMUST00000041639 Rnf17Q99MV7 1640 aa10.22□□□□□ -0.77
Syne1-201ENSMUST00000041639 Scgb2b11A0A087WR49 112 aa10.22□□□□□ -0.77
Syne1-201ENSMUST00000041639 Gm17615E9Q9P2 165 aa10.22□□□□□ -0.77
Syne1-201ENSMUST00000041639 Gm5861F6VCN9 180 aa10.22□□□□□ -0.77
Syne1-201ENSMUST00000041639 4933402N22RikF7D1B3 190 aa10.22□□□□□ -0.77
Syne1-201ENSMUST00000041639 Slc27a2O35488 620 aa10.22□□□□□ -0.77
Syne1-201ENSMUST00000041639 Sult1e1P49891 295 aa10.22□□□□□ -0.77
Syne1-201ENSMUST00000041639 Inf2Q0GNC1 1273 aa10.22□□□□□ -0.77
Syne1-201ENSMUST00000041639 Fbxo28Q8BIG4 368 aa10.22□□□□□ -0.77
Syne1-201ENSMUST00000041639 Ticam2Q8BJQ4 232 aa10.22□□□□□ -0.77
Syne1-201ENSMUST00000041639 Cox18Q8VC74 331 aa10.22□□□□□ -0.77
Syne1-201ENSMUST00000041639 Olfr1123A2AT85 323 aa10.22□□□□□ -0.77
Syne1-201ENSMUST00000041639 CflarO35732 481 aa10.22□□□□□ -0.77
Syne1-201ENSMUST00000041639 Axdnd1Q3UZ57 424 aa10.22□□□□□ -0.77
Syne1-201ENSMUST00000041639 Brinp3Q499E0 766 aa10.22□□□□□ -0.77
Syne1-201ENSMUST00000041639 Gm4952Q5FW57 296 aa10.22□□□□□ -0.77
Syne1-201ENSMUST00000041639 Mrgprb8Q7TN51 330 aa10.22□□□□□ -0.77
Syne1-201ENSMUST00000041639 MtrrQ8C1A3 696 aa10.22□□□□□ -0.77
Syne1-201ENSMUST00000041639 PnkpQ9JLV6 522 aaKnown RBP10.22□□□□□ -0.77
Syne1-201ENSMUST00000041639 Smok2bQ9QYZ3 484 aa10.22□□□□□ -0.77
Syne1-201ENSMUST00000041639 Smok2aQ9QYZ6 504 aa10.22□□□□□ -0.77
Syne1-201ENSMUST00000041639 Mrpl40Q9Z2Q5 206 aa10.22□□□□□ -0.77
Syne1-201ENSMUST00000041639 Efcab12V9GXH0 673 aa10.22□□□□□ -0.77
Syne1-201ENSMUST00000041639 Nptx2O70340 429 aa10.22□□□□□ -0.77
Syne1-201ENSMUST00000041639 Bcat1P24288 386 aa10.22□□□□□ -0.77
Syne1-201ENSMUST00000041639 Eps15l1Q60902 907 aaKnown RBP10.22□□□□□ -0.77
Syne1-201ENSMUST00000041639 Bcap29Q61334 240 aa10.22□□□□□ -0.77
Syne1-201ENSMUST00000041639 Ppm1nQ8BGL1 404 aa10.22□□□□□ -0.77
Syne1-201ENSMUST00000041639 Kirrel3Q8BR86 778 aa10.22□□□□□ -0.77
Syne1-201ENSMUST00000041639 Tbc1d10cQ8C9V1 444 aa10.22□□□□□ -0.77
Syne1-201ENSMUST00000041639 Nox1Q8CIZ9 591 aa10.22□□□□□ -0.77
Syne1-201ENSMUST00000041639 Cnot3Q8K0V4 751 aaKnown RBP10.22□□□□□ -0.77
Syne1-201ENSMUST00000041639 Ndufa10Q99LC3 355 aaKnown RBP10.22□□□□□ -0.77
Syne1-201ENSMUST00000041639 Tssk3Q9D2E1 268 aa10.22□□□□□ -0.77
Syne1-201ENSMUST00000041639 Zscan4-ps1A0A1C7CYV3 506 aa10.22□□□□□ -0.77
Syne1-201ENSMUST00000041639 Map7d3A2AEY4 876 aa10.22□□□□□ -0.77
Syne1-201ENSMUST00000041639 Zscan4dA7KBS4 506 aa10.22□□□□□ -0.77
Syne1-201ENSMUST00000041639 Akr1b7P21300 316 aa10.22□□□□□ -0.77
Syne1-201ENSMUST00000041639 Zscan4fQ3URS2 506 aa10.22□□□□□ -0.77
Syne1-201ENSMUST00000041639 Tnfaip2Q61333 691 aa10.22□□□□□ -0.77
Syne1-201ENSMUST00000041639 Zscan4cQ80VJ6 506 aa10.22□□□□□ -0.77
Syne1-201ENSMUST00000041639 Rmdn2Q8BSE0 410 aa10.22□□□□□ -0.77
Syne1-201ENSMUST00000041639 GanQ8CA72 597 aa10.22□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 29.5 ms