RNA–Protein interactions for RNA: ENSMUST00000040783.10

Usp40-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Usp40, Length 5,049 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40-201ENSMUST00000040783 GmipQ6PGG2 971 aa7.83□□□□□ -1.16
Usp40-201ENSMUST00000040783 NostrinQ6WKZ7 506 aa7.83□□□□□ -1.16
Usp40-201ENSMUST00000040783 Nsun6Q7TS68 476 aa7.83□□□□□ -1.16
Usp40-201ENSMUST00000040783 Cyp4a12aQ91WL5 508 aa7.83□□□□□ -1.16
Usp40-201ENSMUST00000040783 Nfu1Q9QZ23 255 aa7.83□□□□□ -1.16
Usp40-201ENSMUST00000040783 CtsfQ9R013 462 aa7.83□□□□□ -1.16
Usp40-201ENSMUST00000040783 Cylc2B1AWN8 422 aa7.83□□□□□ -1.16
Usp40-201ENSMUST00000040783 Ces1bD3Z5G7 567 aa7.83□□□□□ -1.16
Usp40-201ENSMUST00000040783 StrnO55106 780 aa7.83□□□□□ -1.16
Usp40-201ENSMUST00000040783 PtprcP06800 1291 aa7.83□□□□□ -1.16
Usp40-201ENSMUST00000040783 Ctnnd1P30999 938 aaKnown RBP7.83□□□□□ -1.16
Usp40-201ENSMUST00000040783 Inpp1P49442 396 aa7.83□□□□□ -1.16
Usp40-201ENSMUST00000040783 LtbrP50284 415 aa7.83□□□□□ -1.16
Usp40-201ENSMUST00000040783 Foxp2P58463 714 aa7.83□□□□□ -1.16
Usp40-201ENSMUST00000040783 Cops2P61202 443 aaKnown RBP7.83□□□□□ -1.16
Usp40-201ENSMUST00000040783 rp9P97762 213 aa7.83□□□□□ -1.16
Usp40-201ENSMUST00000040783 Flot2Q60634 428 aaKnown RBP7.83□□□□□ -1.16
Usp40-201ENSMUST00000040783 Git1Q68FF6 770 aa7.83□□□□□ -1.16
Usp40-201ENSMUST00000040783 Tmem117Q8BH18 514 aa7.83□□□□□ -1.16
Usp40-201ENSMUST00000040783 Tcaf1Q8BNE1 924 aa7.83□□□□□ -1.16
Usp40-201ENSMUST00000040783 Grin3bQ91ZU9 1003 aa7.83□□□□□ -1.16
Usp40-201ENSMUST00000040783 Q922M7 232 aa7.83□□□□□ -1.16
Usp40-201ENSMUST00000040783 Pin4Q9CWW6 131 aa7.83□□□□□ -1.16
Usp40-201ENSMUST00000040783 ArpinQ9D0A3 226 aa7.83□□□□□ -1.16
Usp40-201ENSMUST00000040783 Eef1akmt2Q9D853 244 aa7.83□□□□□ -1.16
Usp40-201ENSMUST00000040783 Cib4Q9D9N5 185 aa7.83□□□□□ -1.16
Usp40-201ENSMUST00000040783 Rhobtb1Q9DAK3 695 aa7.83□□□□□ -1.16
Usp40-201ENSMUST00000040783 Git2Q9JLQ2 708 aa7.83□□□□□ -1.16
Usp40-201ENSMUST00000040783 Shcbp1Q9Z179 668 aa7.83□□□□□ -1.16
Usp40-201ENSMUST00000040783 Slc8a3S4R2P9 928 aa7.83□□□□□ -1.16
Usp40-201ENSMUST00000040783 Skint3A7TZF0 458 aa7.82□□□□□ -1.16
Usp40-201ENSMUST00000040783 Axin1O35625 863 aa7.82□□□□□ -1.16
Usp40-201ENSMUST00000040783 Lamp1P11438 406 aaKnown RBP7.82□□□□□ -1.16
Usp40-201ENSMUST00000040783 PklrP53657 574 aa7.82□□□□□ -1.16
Usp40-201ENSMUST00000040783 Tbx3P70324 741 aa7.82□□□□□ -1.16
Usp40-201ENSMUST00000040783 Npas2P97460 816 aa7.82□□□□□ -1.16
Usp40-201ENSMUST00000040783 Slc10a5Q5PT54 434 aa7.82□□□□□ -1.16
Usp40-201ENSMUST00000040783 Rgl2Q61193 778 aa7.82□□□□□ -1.16
Usp40-201ENSMUST00000040783 Atp11bQ6DFW5 1175 aa7.82□□□□□ -1.16
Usp40-201ENSMUST00000040783 Jade1Q6ZPI0 834 aaKnown RBP7.82□□□□□ -1.16
Usp40-201ENSMUST00000040783 Usp17leQ7M764 540 aa7.82□□□□□ -1.16
Usp40-201ENSMUST00000040783 Pdk1Q8BFP9 434 aaKnown RBP7.82□□□□□ -1.16
Usp40-201ENSMUST00000040783 Cwf19l1Q8CI33 537 aa7.82□□□□□ -1.16
Usp40-201ENSMUST00000040783 Celf3Q8CIN6 465 aa7.82□□□□□ -1.16
Usp40-201ENSMUST00000040783 HpdlQ8K248 371 aa7.82□□□□□ -1.16
Usp40-201ENSMUST00000040783 Pcdhb21Q91V48 774 aa7.82□□□□□ -1.16
Usp40-201ENSMUST00000040783 Znhit2Q9QY66 399 aa7.82□□□□□ -1.16
Usp40-201ENSMUST00000040783 Cd97Q9Z0M6 818 aa7.82□□□□□ -1.16
Usp40-201ENSMUST00000040783 Cog1Q9Z160 980 aa7.82□□□□□ -1.16
Usp40-201ENSMUST00000040783 Crlf3Q9Z2L7 442 aa7.82□□□□□ -1.16
Usp40-201ENSMUST00000040783 Nup153E9Q3G8 1462 aaKnown RBP7.82□□□□□ -1.16
Usp40-201ENSMUST00000040783 Cdk5rap2Q8K389 1822 aa7.82□□□□□ -1.16
Usp40-201ENSMUST00000040783 Ttc23lA6H6E9 458 aa7.82□□□□□ -1.16
Usp40-201ENSMUST00000040783 Raph1F2Z3U3 1266 aa7.82□□□□□ -1.16
Usp40-201ENSMUST00000040783 Usp17ldG5E8G2 545 aa7.82□□□□□ -1.16
Usp40-201ENSMUST00000040783 Usp17lcG5E8I7 545 aa7.82□□□□□ -1.16
Usp40-201ENSMUST00000040783 Brsk2Q69Z98 735 aa7.82□□□□□ -1.16
Usp40-201ENSMUST00000040783 Ints2Q80UK8 1198 aa7.82□□□□□ -1.16
Usp40-201ENSMUST00000040783 Ip6k2Q80V72 448 aa7.82□□□□□ -1.16
Usp40-201ENSMUST00000040783 Fam205cQ80YD3 371 aa7.82□□□□□ -1.16
Usp40-201ENSMUST00000040783 Acad9Q8JZN5 625 aaKnown RBP7.82□□□□□ -1.16
Usp40-201ENSMUST00000040783 NelfcdQ922L6 591 aa7.82□□□□□ -1.16
Usp40-201ENSMUST00000040783 Trim7Q923T7 510 aa7.82□□□□□ -1.16
Usp40-201ENSMUST00000040783 Ferd3lQ923Z4 168 aa7.82□□□□□ -1.16
Usp40-201ENSMUST00000040783 Taf11Q99JX1 211 aa7.82□□□□□ -1.16
Usp40-201ENSMUST00000040783 CatsperzQ9CQP8 194 aa7.82□□□□□ -1.16
Usp40-201ENSMUST00000040783 Cmtr1Q9DBC3 837 aa7.82□□□□□ -1.16
Usp40-201ENSMUST00000040783 Orc3Q9JK30 715 aaKnown RBP7.82□□□□□ -1.16
Usp40-201ENSMUST00000040783 Fut8Q9WTS2 575 aa7.82□□□□□ -1.16
Usp40-201ENSMUST00000040783 Gm3402K7N5P2 326 aa7.82□□□□□ -1.16
Usp40-201ENSMUST00000040783 CfhP06909 1234 aa7.82□□□□□ -1.16
Usp40-201ENSMUST00000040783 Tlx1P43345 332 aa7.82□□□□□ -1.16
Usp40-201ENSMUST00000040783 Resp18P47939 175 aa7.82□□□□□ -1.16
Usp40-201ENSMUST00000040783 PltpP55065 493 aa7.82□□□□□ -1.16
Usp40-201ENSMUST00000040783 HmgcrQ01237 887 aa7.82□□□□□ -1.16
Usp40-201ENSMUST00000040783 Sox10Q04888 466 aa7.82□□□□□ -1.16
Usp40-201ENSMUST00000040783 Krt35Q497I4 455 aa7.82□□□□□ -1.16
Usp40-201ENSMUST00000040783 SpdyaQ5IBH7 310 aa7.82□□□□□ -1.16
Usp40-201ENSMUST00000040783 Fam169aQ5XG69 665 aa7.82□□□□□ -1.16
Usp40-201ENSMUST00000040783 Irak1Q62406 710 aa7.82□□□□□ -1.16
Usp40-201ENSMUST00000040783 ChpfQ6IQX7 774 aa7.82□□□□□ -1.16
Usp40-201ENSMUST00000040783 Spon2Q8BMS2 330 aa7.82□□□□□ -1.16
Usp40-201ENSMUST00000040783 Brat1Q8C3R1 822 aa7.82□□□□□ -1.16
Usp40-201ENSMUST00000040783 Prr33Q8C494 260 aa7.82□□□□□ -1.16
Usp40-201ENSMUST00000040783 P3h2Q8CG71 703 aa7.82□□□□□ -1.16
Usp40-201ENSMUST00000040783 Pcdha3Q91Y16 942 aa7.82□□□□□ -1.16
Usp40-201ENSMUST00000040783 Mccc1Q99MR8 717 aa7.82□□□□□ -1.16
Usp40-201ENSMUST00000040783 Polr3cQ9D483 533 aa7.82□□□□□ -1.16
Usp40-201ENSMUST00000040783 Mrpl2Q9D773 306 aaKnown RBP7.82□□□□□ -1.16
Usp40-201ENSMUST00000040783 Bmp15Q9Z0L4 392 aa7.82□□□□□ -1.16
Usp40-201ENSMUST00000040783 Smim10l2aA0A0B4J1F8 78 aa7.81□□□□□ -1.16
Usp40-201ENSMUST00000040783 Osbpl7A2A716 963 aa7.81□□□□□ -1.16
Usp40-201ENSMUST00000040783 Btnl4A2CG29 586 aa7.81□□□□□ -1.16
Usp40-201ENSMUST00000040783 Ifi206G3UZV2 921 aa7.81□□□□□ -1.16
Usp40-201ENSMUST00000040783 Ppargc1aO70343 797 aa7.81□□□□□ -1.16
Usp40-201ENSMUST00000040783 Mov10P23249 1004 aaKnown RBP7.81□□□□□ -1.16
Usp40-201ENSMUST00000040783 Guca1aP43081 202 aa7.81□□□□□ -1.16
Usp40-201ENSMUST00000040783 Ezh1P70351 747 aa7.81□□□□□ -1.16
Usp40-201ENSMUST00000040783 Coq7P97478 217 aa7.81□□□□□ -1.16
Usp40-201ENSMUST00000040783 Ankrd34bQ3UUF8 508 aa7.81□□□□□ -1.16
Retrieved 100 of 22,080 RNA–protein pairs in 35.1 ms