RNA–Protein interactions for RNA: ENSMUST00000033378.12

Ebf3-201, Transcript of Transcription factor COE3, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ebf3, Length 4,838 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-201ENSMUST00000033378 Zscan4-ps1A0A1C7CYV3 506 aa19.25■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Ttc30a2A2AKQ8 664 aa19.25■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Zscan4dA7KBS4 506 aa19.25■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Gcnt4E9Q649 455 aa19.25■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Ccnd1P25322 295 aa19.25■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Zscan4fQ3URS2 506 aa19.25■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Zscan4cQ80VJ6 506 aa19.25■□□□□ 0.67
Ebf3-201ENSMUST00000033378 ThtpaQ8JZL3 224 aa19.25■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Gm36210A0A1B0GS00 229 aa19.25■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Gm3248K7N721 186 aa19.25■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Pgk2P09041 417 aa19.25■□□□□ 0.67
Ebf3-201ENSMUST00000033378 GclcP97494 637 aa19.25■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Grk2Q99MK8 689 aa19.25■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Mccc1Q99MR8 717 aa19.25■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Sv2aQ9JIS5 742 aa19.25■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Crabp2P22935 138 aa19.25■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Syce2Q505B8 171 aa19.25■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Zrsr1Q64707 428 aa19.25■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Raver2Q7TPD6 673 aa19.25■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Phf20Q8BLG0 1010 aaKnown RBP19.25■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Trmt2aQ8BNV1 574 aaKnown RBP19.25■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Gpr180Q8BPS4 441 aa19.25■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Ddx18Q8K363 660 aaKnown RBP19.25■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Dpp3Q99KK7 738 aa19.25■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Tssk3Q9D2E1 268 aa19.25■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Znf804aA2AKY4 1200 aa19.24■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Akap1O08715 857 aaKnown RBP19.24■□□□□ 0.67
Ebf3-201ENSMUST00000033378 ItgalP24063 1163 aa19.24■□□□□ 0.67
Ebf3-201ENSMUST00000033378 TraddQ3U0V2 310 aa19.24■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Scd4Q6T707 353 aa19.24■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Atg4cQ811C2 458 aa19.24■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Slc38a7Q8BWH0 463 aa19.24■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Spata31E9QAF0 1014 aa19.24■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Srpk1O70551 648 aaKnown RBP19.24■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Krt4P07744 525 aa19.24■□□□□ 0.67
Ebf3-201ENSMUST00000033378 4933427I04RikQ3V053 235 aa19.24■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Fbxw10Q5SUS0 1030 aa19.24■□□□□ 0.67
Ebf3-201ENSMUST00000033378 MydgfQ9CPT4 166 aa19.24■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Atp13a1Q9EPE9 1200 aaKnown RBP19.24■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Kcna2P63141 499 aa19.24■□□□□ 0.67
Ebf3-201ENSMUST00000033378 4930430A15RikQ05AC5 485 aa19.24■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Calb2Q08331 271 aa19.24■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Patl1Q3TC46 770 aaKnown RBP19.24■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Tmem26Q3UP23 366 aa19.24■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Nsun6Q7TS68 476 aa19.24■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Phka2Q8BWJ3 1235 aa19.24■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Txndc12Q9CQU0 170 aa19.24■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Ppp1r12aQ9DBR7 1029 aaKnown RBP19.24■□□□□ 0.67
Ebf3-201ENSMUST00000033378 NfkbizQ9EST8 728 aa19.24■□□□□ 0.67
Ebf3-201ENSMUST00000033378 SpdyaQ5IBH7 310 aa19.23■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Gm7247Q6UY52 187 aa19.23■□□□□ 0.67
Ebf3-201ENSMUST00000033378 HpdlQ8K248 371 aa19.23■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Farp1F8VPU2 1048 aa19.23■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Psmb9P28076 219 aa19.23■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Pkn1P70268 946 aa19.23■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Togaram2Q3TYG6 1002 aa19.23■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Fam160b1Q8CDM8 764 aa19.23■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Cdr2lA2A6T1 465 aa19.23■□□□□ 0.67
Ebf3-201ENSMUST00000033378 GclmO09172 274 aaKnown RBP19.23■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Rbp3P49194 1234 aa19.23■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Map3k10Q66L42 940 aa19.23■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Otud6aQ6IE21 290 aa19.23■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Cd300ldQ8VCH2 221 aa19.23■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Olfr395Q8VGR3 312 aa19.23■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Ciapin1Q8WTY4 309 aa19.23■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Lpin2Q99PI5 893 aa19.23■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Sgf29Q9DA08 293 aaKnown RBP19.23■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Capn15Q9JLG8 1095 aa19.23■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Dlc1Q9R0Z9 1092 aa19.23■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Gbp4A4UUI3 631 aa19.23■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Cdk16Q04735 496 aa19.23■□□□□ 0.67
Ebf3-201ENSMUST00000033378 ZyxQ62523 564 aa19.23■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Nmd3Q99L48 503 aaKnown RBP19.23■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Nudt5Q9JKX6 218 aa19.23■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Magea10A2AMW4 325 aa19.22■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Gm3095E9Q058 166 aa19.22■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Oog1E9Q5G7 496 aa19.22■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Sstr1P30873 391 aa19.22■□□□□ 0.67
Ebf3-201ENSMUST00000033378 PpargP37238 505 aa19.22■□□□□ 0.67
Ebf3-201ENSMUST00000033378 4930502E18RikQ14BQ3 236 aa19.22■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Btbd10Q80X66 475 aa19.22■□□□□ 0.67
Ebf3-201ENSMUST00000033378 C8aQ8K182 587 aa19.22■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Zcchc18Q8VD24 393 aa19.22■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Nr3c2Q8VII8 978 aa19.22■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Dis3Q9CSH3 958 aaKnown RBP19.22■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Tmed5Q9CXE7 229 aa19.22■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Tm9sf1Q9DBU0 606 aa19.22■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Inpp4aQ9EPW0 939 aa19.22■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Galnt4O08832 578 aa19.22■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Bmpr2O35607 1038 aa19.22■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Bcat1P24288 386 aa19.22■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Kcnk9Q3LS21 402 aa19.22■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Fbxw7Q8VBV4 629 aa19.22■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Lman1lQ8VCD3 505 aa19.22■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Olfr615Q8VGY4 313 aa19.22■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Thg1lQ9CY52 298 aa19.22■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Lrrc57Q9D1G5 239 aa19.22■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Nfx1B1AY10 1114 aaKnown RBP19.22■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Rap1gds1E9Q912 607 aa19.22■□□□□ 0.67
Ebf3-201ENSMUST00000033378 Rps6P62754 249 aaKnown RBP19.22■□□□□ 0.67
Retrieved 100 of 22,080 RNA–protein pairs in 18.4 ms