RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Arhgap15Q811M1 481 aa10.55□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Fbxl13Q8CDU4 790 aa10.55□□□□□ -0.72
Ubr1-201ENSMUST00000028728 CtsqQ91ZF4 343 aa10.55□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Tbx18Q9EPZ6 613 aa10.55□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Trpv2Q9WTR1 756 aa10.55□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Pdpk1Q9Z2A0 559 aa10.55□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Cyb5rlB1AS42 316 aa10.55□□□□□ -0.72
Ubr1-201ENSMUST00000028728 IqcmQ149I8 489 aa10.55□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Kcnk9Q3LS21 402 aa10.55□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Trpc5osQ3UHV4 110 aa10.55□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Bpifb5Q3UQ05 490 aa10.55□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Ppp1r14bQ62084 147 aa10.55□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Osbpl6Q8BXR9 959 aa10.55□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Ndufa10Q99LC3 355 aaKnown RBP10.55□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Tmem79Q9D709 391 aa10.55□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Rnf19bA2A7Q9 732 aa10.54□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Magea10A2AMW4 325 aa10.54□□□□□ -0.72
Ubr1-201ENSMUST00000028728 PtprcP06800 1291 aa10.54□□□□□ -0.72
Ubr1-201ENSMUST00000028728 PuraP42669 321 aaKnown RBP10.54□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Znf507Q6ZPY5 941 aa10.54□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Ush1gQ80T11 461 aa10.54□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Dedd2Q8QZV0 330 aa10.54□□□□□ -0.72
Ubr1-201ENSMUST00000028728 YwhabQ9CQV8 246 aaKnown RBP10.54□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Ttc30bQ9CY00 664 aa10.54□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Polr3eQ9CZT4 710 aa10.54□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Hmg20aQ9DC33 346 aa10.54□□□□□ -0.72
Ubr1-201ENSMUST00000028728 RalbQ9JIW9 206 aa10.54□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Zc3h4Q6ZPZ3 1304 aaKnown RBP10.54□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Ttc37F8VPK0 1563 aa10.54□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Nme9A0A1L1SUL6 329 aa10.54□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Stx7O70439 261 aa10.54□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Grem2O88273 168 aa10.54□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Tlx1P43345 332 aa10.54□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Trim67Q505D9 768 aa10.54□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Grm4Q68EF4 912 aa10.54□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Scd4Q6T707 353 aa10.54□□□□□ -0.72
Ubr1-201ENSMUST00000028728 TufmQ8BFR5 452 aa10.54□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Nup93Q8BJ71 819 aaKnown RBP10.54□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Fbxo44Q8BK26 255 aa10.54□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Dnali1Q8BVN8 258 aa10.54□□□□□ -0.72
Ubr1-201ENSMUST00000028728 TbcelQ8C5W3 424 aa10.54□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Sept10Q8C650 452 aa10.54□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Nemp2Q8CB65 421 aa10.54□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Txndc5Q91W90 417 aa10.54□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Cstf3Q99LI7 717 aaKnown RBP10.54□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Mzt2Q9CQ25 159 aa10.54□□□□□ -0.72
Ubr1-201ENSMUST00000028728 1700123K08RikQ9D991 295 aa10.54□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Orc6Q9WUJ8 262 aa10.54□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Zfy2P20662 777 aa10.54□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Sox6P40645 827 aa10.54□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Nab1Q61122 486 aa10.54□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Ano5Q75UR0 904 aa10.54□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Tubgcp5Q8BKN5 1024 aa10.54□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Nme5Q99MH5 211 aa10.54□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Gmeb1Q9JL60 562 aa10.54□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Trip4Q9QXN3 581 aa10.54□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Tmem2Q5FWI3 1383 aa10.54□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Knl1Q66JQ7 1612 aa10.54□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Gm10436L7N1Y3 520 aa10.54□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Asna1O54984 348 aa10.54□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Galnt3P70419 633 aa10.54□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Proser1Q5PRE5 913 aa10.54□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Nsl1Q8K305 281 aa10.54□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Lyrm1Q9CQB7 122 aa10.54□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Ddx28Q9CWT6 540 aaKnown RBP10.54□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Sapcd2Q9D818 391 aa10.54□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Ssc5dQ8BV57 1371 aa10.54□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Nid2O88322 1403 aa10.54□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Vmn2r104E9Q2J5 860 aa10.54□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Srpk1O70551 648 aaKnown RBP10.54□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Mcpt1P11034 246 aa10.54□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Impdh2P24547 514 aa10.54□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Cct8P42932 548 aa10.54□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Foxred2Q3USW5 665 aa10.54□□□□□ -0.72
Ubr1-201ENSMUST00000028728 EregQ61521 162 aa10.54□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Dapk2Q8VDF3 370 aa10.54□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Rad54lP70270 747 aa10.54□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Eps15l1Q60902 907 aaKnown RBP10.54□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Ccdc63Q8CDV6 558 aa10.54□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Vmn1r199Q8R280 367 aa10.54□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Akr1c14Q91WT7 323 aa10.54□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Ube2sQ921J4 223 aa10.54□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Gm21083A0A0G2JFD5 256 aa10.53□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Trim12cD3Z3L3 497 aa10.53□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Cyp2c23E9Q5K4 494 aa10.53□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Gm5152L7N200 190 aa10.53□□□□□ -0.72
Ubr1-201ENSMUST00000028728 C2P21180 760 aa10.53□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Ccnd2P30280 289 aa10.53□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Gdf10P97737 476 aa10.53□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Znf451Q8C0P7 1056 aa10.53□□□□□ -0.72
Ubr1-201ENSMUST00000028728 NcaldQ91X97 193 aa10.53□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Maged2Q9ER67 616 aa10.53□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Atp8b4A2ANX3 1194 aa10.53□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Gm8011K7N6Y5 207 aa10.53□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Cct7P80313 544 aa10.53□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Atxn7l3bQ3UD01 97 aa10.53□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Lrrc55Q3UY51 311 aa10.53□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Coq8aQ60936 645 aa10.53□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Gm7247Q6UY52 187 aa10.53□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Moxd2Q7TT41 619 aa10.53□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 27.3 ms