RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Rab11fip1Q9D620 645 aa9.52□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Nudt12Q9DCN1 462 aa9.52□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 DiabloQ9JIQ3 237 aa9.52□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Sh2d3cQ9QZS8 854 aa9.52□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Rnf103Q9R1W3 683 aa9.52□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Rhox3cA2AWM0 215 aa9.52□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Rrn3B2RS91 656 aa9.52□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Gm5483B2RV77 97 aa9.52□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Rhox3hL7MU37 215 aa9.52□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 AfmO89020 608 aa9.52□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 MybP06876 636 aa9.52□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 RarbP22605 482 aa9.52□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Mgat1P27808 447 aa9.52□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Gsta3P30115 221 aa9.52□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Pstpip1P97814 415 aa9.52□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Llgl2Q3TJ91 1027 aa9.52□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Tmem237Q3V0J1 427 aa9.52□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Rhox3aQ4TU90 215 aa9.52□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Cep44Q5HZK1 386 aa9.52□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Gm2163Q6PCY5 473 aa9.52□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Lsm8Q6ZWM4 96 aaKnown RBP9.52□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Cwf19l2Q8BG79 887 aaKnown RBP9.52□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Taf2Q8C176 1104 aa9.52□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Traf7Q922B6 594 aa9.52□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Tns3Q5SSZ5 1440 aa9.52□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Atp10bB1AWN4 1474 aa9.52□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Gm8011K7N6Y5 207 aa9.52□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 HmbsP22907 361 aa9.52□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Tmem35bQ3U0Y2 150 aa9.52□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 WlsQ6DID7 541 aa9.52□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Fam120bQ6RI63 786 aa9.52□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Raver2Q7TPD6 673 aa9.52□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Fbxo9Q8BK06 437 aa9.52□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Pnma3Q8JZW8 466 aa9.52□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Tldc1Q8K0P3 455 aa9.52□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Rec114Q9CWH4 259 aa9.52□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Maged2Q9ER67 616 aa9.52□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Tmem59Q9QY73 323 aa9.52□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Krt6bQ9Z331 562 aa9.52□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Fam166bA2AIP0 273 aa9.52□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Ttll9A2APC3 461 aa9.52□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Krt86P97861 486 aa9.52□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 9130409I23RikQ3TS87 320 aa9.52□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Ankrd27Q3UMR0 1048 aa9.52□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 ItgadQ3V0T4 1168 aa9.52□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Zfp454Q80Y34 536 aa9.52□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Slc6a15Q8BG16 729 aa9.52□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 DpydQ8CHR6 1025 aa9.52□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 N4bp2l2Q8JZS6 575 aa9.52□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Dedd2Q8QZV0 330 aa9.52□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Gramd1aQ8VEF1 722 aa9.52□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Rmnd5bQ91YQ7 393 aa9.52□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Trap1Q9CQN1 706 aaKnown RBP9.52□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Hspa12bQ9CZJ2 685 aa9.52□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Scgb2b20Q9JI02 112 aa9.52□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 PygmQ9WUB3 842 aaKnown RBP9.52□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Cyp2c23E9Q5K4 494 aa9.51□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 ZfrO88532 1074 aaKnown RBP9.51□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Ifnar1P33896 590 aa9.51□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Cd86P42082 309 aa9.51□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Tmem117Q8BH18 514 aa9.51□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 SgtaQ8BJU0 315 aa9.51□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Tmem145Q8C4U2 746 aa9.51□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Ccdc134Q8C7V8 229 aa9.51□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Agr3Q8R3W7 165 aa9.51□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Exd2Q8VEG4 650 aaKnown RBP9.51□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Fuca2Q99KR8 461 aa9.51□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Noxred1Q9D3S5 366 aa9.51□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Dot1lQ6XZL8 1540 aa9.51□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Pex5O09012 639 aa9.51□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Angpt2O35608 496 aa9.51□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Nmt1O70310 496 aaKnown RBP9.51□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Il1aP01582 270 aa9.51□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Zdhhc9P59268 364 aa9.51□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Rplp2P99027 115 aaKnown RBP9.51□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Klra5Q60652 266 aa9.51□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Capn11Q6J756 714 aa9.51□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Mtmr12Q80TA6 747 aa9.51□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Rnaseh2bQ80ZV0 308 aa9.51□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Nup93Q8BJ71 819 aaKnown RBP9.51□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 PygbQ8CI94 843 aaKnown RBP9.51□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Afg3l2Q8JZQ2 802 aaKnown RBP9.51□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Kiaa0319lQ8K135 1048 aa9.51□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Dnajc9Q91WN1 259 aaKnown RBP9.51□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Pcdhb1Q91Y08 818 aa9.51□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Slc13a3Q91Y63 600 aa9.51□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Mageb3Q9D2H4 330 aa9.51□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Tagln3Q9R1Q8 199 aa9.51□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Magi3Q9EQJ9 1476 aa9.51□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 CflarO35732 481 aa9.51□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Tap1P21958 724 aa9.51□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Klra9Q2TJJ8 266 aa9.51□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Rasip1Q3U0S6 961 aa9.51□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Rcsd1Q3UZA1 412 aa9.51□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Tnni3kQ5GIG6 834 aa9.51□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Slc26a2Q62273 739 aa9.51□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 DcstampQ7TNJ0 470 aa9.51□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Them6Q80ZW2 207 aa9.51□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Syne4Q8CII8 388 aa9.51□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Sorcs3Q8VI51 1219 aa9.51□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 18.8 ms