RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 TAS1R1Q7RTX1 841 aa18.61■□□□□ 0.57
PHGDH-230ENST00000641927 EPS8L1Q8TE68 723 aa18.61■□□□□ 0.57
PHGDH-230ENST00000641927 TNIP3Q96KP6 325 aa18.61■□□□□ 0.57
PHGDH-230ENST00000641927 TTPALQ9BTX7 342 aa18.61■□□□□ 0.57
PHGDH-230ENST00000641927 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.61■□□□□ 0.57
PHGDH-230ENST00000641927 SEPT11Q9NVA2 429 aaKnown RBP18.61■□□□□ 0.57
PHGDH-230ENST00000641927 ARHGAP20Q9P2F6 1191 aa18.61■□□□□ 0.57
PHGDH-230ENST00000641927 RWDD3Q9Y3V2 267 aa18.61■□□□□ 0.57
PHGDH-230ENST00000641927 PAEPP09466 180 aa18.6■□□□□ 0.57
PHGDH-230ENST00000641927 FGFR3P22607 806 aa18.6■□□□□ 0.57
PHGDH-230ENST00000641927 BRD2P25440 801 aaKnown RBP18.6■□□□□ 0.57
PHGDH-230ENST00000641927 PCSK1P29120 753 aa18.6■□□□□ 0.57
PHGDH-230ENST00000641927 BMPR1AP36894 532 aa18.6■□□□□ 0.57
PHGDH-230ENST00000641927 PRKCIP41743 596 aa18.6■□□□□ 0.57
PHGDH-230ENST00000641927 USP41Q3LFD5 358 aa18.6■□□□□ 0.57
PHGDH-230ENST00000641927 NOP9Q86U38 636 aaKnown RBP18.6■□□□□ 0.57
PHGDH-230ENST00000641927 TMTC1Q8IUR5 882 aa18.6■□□□□ 0.57
PHGDH-230ENST00000641927 KLHL23Q8NBE8 558 aa18.6■□□□□ 0.57
PHGDH-230ENST00000641927 CCDC112Q8NEF3 446 aa18.6■□□□□ 0.57
PHGDH-230ENST00000641927 SPATA18Q8TC71 538 aa18.6■□□□□ 0.57
PHGDH-230ENST00000641927 SLC20A1Q8WUM9 679 aa18.6■□□□□ 0.57
PHGDH-230ENST00000641927 TRIM44Q96DX7 344 aaPredicted RBP18.6■□□□□ 0.57
PHGDH-230ENST00000641927 C17orf80Q9BSJ5 609 aa18.6■□□□□ 0.57
PHGDH-230ENST00000641927 VN1R3Q9BXE9 311 aa18.6■□□□□ 0.57
PHGDH-230ENST00000641927 PDCL3Q9H2J4 239 aa18.6■□□□□ 0.57
PHGDH-230ENST00000641927 NHEJ1Q9H9Q4 299 aaPredicted RBP18.6■□□□□ 0.57
PHGDH-230ENST00000641927 C2CD2LO14523 706 aa18.6■□□□□ 0.57
PHGDH-230ENST00000641927 ATP2C2O75185 946 aa18.6■□□□□ 0.57
PHGDH-230ENST00000641927 SSTR3P32745 418 aaPredicted RBP18.6■□□□□ 0.57
PHGDH-230ENST00000641927 EIF4A3P38919 411 aaKnown RBP18.6■□□□□ 0.57
PHGDH-230ENST00000641927 RTP2Q5QGT7 225 aa18.6■□□□□ 0.57
PHGDH-230ENST00000641927 DDX53Q86TM3 631 aaKnown RBP18.6■□□□□ 0.57
PHGDH-230ENST00000641927 C12orf29Q8N999 325 aa18.6■□□□□ 0.57
PHGDH-230ENST00000641927 CCDC42Q96M95 316 aa18.6■□□□□ 0.57
PHGDH-230ENST00000641927 SYT15Q9BQS2 421 aa18.6■□□□□ 0.57
PHGDH-230ENST00000641927 PBX4Q9BYU1 374 aa18.6■□□□□ 0.57
PHGDH-230ENST00000641927 FAM49BQ9NUQ9 324 aa18.6■□□□□ 0.57
PHGDH-230ENST00000641927 MSRAQ9UJ68 235 aa18.6■□□□□ 0.57
PHGDH-230ENST00000641927 YBX2Q9Y2T7 364 aaKnown RBP18.6■□□□□ 0.57
PHGDH-230ENST00000641927 TSC2P49815 1807 aa18.59■□□□□ 0.57
PHGDH-230ENST00000641927 SOWAHDA6NJG2 315 aa18.59■□□□□ 0.57
PHGDH-230ENST00000641927 ARHGEF15O94989 841 aa18.59■□□□□ 0.57
PHGDH-230ENST00000641927 OAZ2O95190 189 aa18.59■□□□□ 0.57
PHGDH-230ENST00000641927 SOD2P04179 222 aa18.59■□□□□ 0.57
PHGDH-230ENST00000641927 CDR1P51861 262 aa18.59■□□□□ 0.57
PHGDH-230ENST00000641927 CDK17Q00537 523 aa18.59■□□□□ 0.57
PHGDH-230ENST00000641927 CTXN3Q4LDR2 81 aa18.59■□□□□ 0.57
PHGDH-230ENST00000641927 SGO2Q562F6 1265 aa18.59■□□□□ 0.57
PHGDH-230ENST00000641927 ZNF571Q7Z3V5 609 aaPredicted RBP18.59■□□□□ 0.57
PHGDH-230ENST00000641927 VPS36Q86VN1 386 aa18.59■□□□□ 0.57
PHGDH-230ENST00000641927 TMEM139Q8IV31 216 aa18.59■□□□□ 0.57
PHGDH-230ENST00000641927 VPS52Q8N1B4 723 aa18.59■□□□□ 0.57
PHGDH-230ENST00000641927 B3GALNT2Q8NCR0 500 aa18.59■□□□□ 0.57
PHGDH-230ENST00000641927 RIN2Q8WYP3 895 aaPredicted RBP18.59■□□□□ 0.57
PHGDH-230ENST00000641927 AGPAT1Q99943 283 aa18.59■□□□□ 0.57
PHGDH-230ENST00000641927 LPIN3Q9BQK8 851 aa18.59■□□□□ 0.57
PHGDH-230ENST00000641927 RTP3Q9BQQ7 232 aa18.59■□□□□ 0.57
PHGDH-230ENST00000641927 NOCTQ9UK39 431 aaKnown RBP18.59■□□□□ 0.57
PHGDH-230ENST00000641927 CDH9Q9ULB4 789 aa18.59■□□□□ 0.57
PHGDH-230ENST00000641927 GBF1Q92538 1859 aa18.59■□□□□ 0.57
PHGDH-230ENST00000641927 AKR1B10O60218 316 aa18.58■□□□□ 0.57
PHGDH-230ENST00000641927 MMEP08473 750 aa18.58■□□□□ 0.57
PHGDH-230ENST00000641927 PTPN1P18031 435 aaKnown RBP18.58■□□□□ 0.57
PHGDH-230ENST00000641927 TNFAIP3P21580 790 aa18.58■□□□□ 0.57
PHGDH-230ENST00000641927 CA8P35219 290 aa18.58■□□□□ 0.57
PHGDH-230ENST00000641927 TSPY1Q01534 308 aa18.58■□□□□ 0.57
PHGDH-230ENST00000641927 RAB30Q15771 203 aa18.58■□□□□ 0.57
PHGDH-230ENST00000641927 SMYD5Q6GMV2 418 aa18.58■□□□□ 0.57
PHGDH-230ENST00000641927 ZNF280DQ6N043 979 aa18.58■□□□□ 0.57
PHGDH-230ENST00000641927 PRSS55Q6UWB4 352 aaPredicted RBP18.58■□□□□ 0.57
PHGDH-230ENST00000641927 ANKS3Q6ZW76 656 aa18.58■□□□□ 0.57
PHGDH-230ENST00000641927 SPRED2Q7Z698 418 aa18.58■□□□□ 0.57
PHGDH-230ENST00000641927 CRYBG2Q8N1P7 616 aa18.58■□□□□ 0.57
PHGDH-230ENST00000641927 OR10T2Q8NGX3 314 aa18.58■□□□□ 0.57
PHGDH-230ENST00000641927 ZNF606Q8WXB4 792 aa18.58■□□□□ 0.57
PHGDH-230ENST00000641927 TFAP2BQ92481 460 aa18.58■□□□□ 0.57
PHGDH-230ENST00000641927 ACBD6Q9BR61 282 aa18.58■□□□□ 0.57
PHGDH-230ENST00000641927 KCNF1Q9H3M0 494 aa18.58■□□□□ 0.57
PHGDH-230ENST00000641927 KIAA1257Q9ULG3 409 aa18.58■□□□□ 0.57
PHGDH-230ENST00000641927 H7C4K7 107 aa18.57■□□□□ 0.56
PHGDH-230ENST00000641927 MED7O43513 233 aa18.57■□□□□ 0.56
PHGDH-230ENST00000641927 CSPG5O95196 566 aa18.57■□□□□ 0.56
PHGDH-230ENST00000641927 EFEMP2O95967 443 aa18.57■□□□□ 0.56
PHGDH-230ENST00000641927 URODP06132 367 aa18.57■□□□□ 0.56
PHGDH-230ENST00000641927 VDRP11473 427 aa18.57■□□□□ 0.56
PHGDH-230ENST00000641927 FECHP22830 423 aa18.57■□□□□ 0.56
PHGDH-230ENST00000641927 DNAJB2P25686 324 aa18.57■□□□□ 0.56
PHGDH-230ENST00000641927 GLUD2P49448 558 aa18.57■□□□□ 0.56
PHGDH-230ENST00000641927 CCZ1BP86790 482 aa18.57■□□□□ 0.56
PHGDH-230ENST00000641927 CCZ1P86791 482 aaPredicted RBP18.57■□□□□ 0.56
PHGDH-230ENST00000641927 CDR2Q01850 454 aa18.57■□□□□ 0.56
PHGDH-230ENST00000641927 PLCB3Q01970 1234 aa18.57■□□□□ 0.56
PHGDH-230ENST00000641927 MDH1BQ5I0G3 518 aa18.57■□□□□ 0.56
PHGDH-230ENST00000641927 KIAA0319Q5VV43 1072 aa18.57■□□□□ 0.56
PHGDH-230ENST00000641927 GLYCTKQ8IVS8 523 aa18.57■□□□□ 0.56
PHGDH-230ENST00000641927 RNF168Q8IYW5 571 aaPredicted RBP18.57■□□□□ 0.56
PHGDH-230ENST00000641927 TGS1Q96RS0 853 aaKnown RBP18.57■□□□□ 0.56
PHGDH-230ENST00000641927 HERC2P3Q9BVR0 1158 aa18.57■□□□□ 0.56
PHGDH-230ENST00000641927 NKX2-4Q9H2Z4 354 aa18.57■□□□□ 0.56
PHGDH-230ENST00000641927 ALG13Q9NP73 1137 aaKnown RBP18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms