RNA–Protein interactions for RNA: ENST00000641828.1

CASC19-260, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 2,001 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-260ENST00000641828 PUS7LQ9H0K6 701 aaKnown RBP6.28□□□□□ -1.4
CASC19-260ENST00000641828 LRMDAQ9H2I8 198 aa6.28□□□□□ -1.4
CASC19-260ENST00000641828 PREBQ9HCU5 417 aa6.28□□□□□ -1.4
CASC19-260ENST00000641828 COMMD3-BMI1R4GMX3 469 aa6.28□□□□□ -1.4
CASC19-260ENST00000641828 SCN4AP35499 1836 aa6.28□□□□□ -1.4
CASC19-260ENST00000641828 MYH3P11055 1940 aa6.28□□□□□ -1.4
CASC19-260ENST00000641828 LRRC53A6NM62 1247 aa6.27□□□□□ -1.41
CASC19-260ENST00000641828 BTNL10A8MVZ5 291 aa6.27□□□□□ -1.41
CASC19-260ENST00000641828 H3BM21 787 aa6.27□□□□□ -1.41
CASC19-260ENST00000641828 PGRMC1O00264 195 aaKnown RBP6.27□□□□□ -1.41
CASC19-260ENST00000641828 KCNK3O14649 394 aa6.27□□□□□ -1.41
CASC19-260ENST00000641828 NVLO15381 856 aaKnown RBP6.27□□□□□ -1.41
CASC19-260ENST00000641828 TBX1O43435 398 aa6.27□□□□□ -1.41
CASC19-260ENST00000641828 DDNO94850 711 aaPredicted RBP6.27□□□□□ -1.41
CASC19-260ENST00000641828 FTCDO95954 541 aa6.27□□□□□ -1.41
CASC19-260ENST00000641828 CST3P01034 146 aaPredicted RBP6.27□□□□□ -1.41
CASC19-260ENST00000641828 SLC1A4P43007 532 aa6.27□□□□□ -1.41
CASC19-260ENST00000641828 CACNA2D1P54289 1103 aa6.27□□□□□ -1.41
CASC19-260ENST00000641828 RNASE9P60153 205 aaKnown RBP6.27□□□□□ -1.41
CASC19-260ENST00000641828 OCRLQ01968 901 aa6.27□□□□□ -1.41
CASC19-260ENST00000641828 CNGA2Q16280 664 aa6.27□□□□□ -1.41
CASC19-260ENST00000641828 TNFAIP8L3Q5GJ75 292 aa6.27□□□□□ -1.41
CASC19-260ENST00000641828 C10orf76Q5T2E6 689 aa6.27□□□□□ -1.41
CASC19-260ENST00000641828 ARL6IP4Q66PJ3 421 aaKnown RBP6.27□□□□□ -1.41
CASC19-260ENST00000641828 DENND2CQ68D51 928 aa6.27□□□□□ -1.41
CASC19-260ENST00000641828 RRAGAQ7L523 313 aa6.27□□□□□ -1.41
CASC19-260ENST00000641828 NPAS3Q8IXF0 933 aa6.27□□□□□ -1.41
CASC19-260ENST00000641828 RNF168Q8IYW5 571 aaPredicted RBP6.27□□□□□ -1.41
CASC19-260ENST00000641828 DTWD1Q8N5C7 304 aa6.27□□□□□ -1.41
CASC19-260ENST00000641828 BVESQ8NE79 360 aa6.27□□□□□ -1.41
CASC19-260ENST00000641828 NEK9Q8TD19 979 aa6.27□□□□□ -1.41
CASC19-260ENST00000641828 ANKS1AQ92625 1134 aa6.27□□□□□ -1.41
CASC19-260ENST00000641828 GATA6Q92908 595 aa6.27□□□□□ -1.41
CASC19-260ENST00000641828 P2RX5Q93086 422 aa6.27□□□□□ -1.41
CASC19-260ENST00000641828 HAPLN3Q96S86 360 aa6.27□□□□□ -1.41
CASC19-260ENST00000641828 NAP1L3Q99457 506 aaPredicted RBP6.27□□□□□ -1.41
CASC19-260ENST00000641828 MYD88Q99836 296 aa6.27□□□□□ -1.41
CASC19-260ENST00000641828 SLX1AQ9BQ83 275 aa6.27□□□□□ -1.41
CASC19-260ENST00000641828 RNF26Q9BY78 433 aaPredicted RBP6.27□□□□□ -1.41
CASC19-260ENST00000641828 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.27□□□□□ -1.41
CASC19-260ENST00000641828 MKRN2Q9H000 416 aaKnown RBP6.27□□□□□ -1.41
CASC19-260ENST00000641828 SFMBT1Q9UHJ3 866 aa6.27□□□□□ -1.41
CASC19-260ENST00000641828 SIK3Q9Y2K2 1263 aa6.27□□□□□ -1.41
CASC19-260ENST00000641828 ABCB11O95342 1321 aa6.27□□□□□ -1.41
CASC19-260ENST00000641828 KRIT1O00522 736 aa6.26□□□□□ -1.41
CASC19-260ENST00000641828 CETN3O15182 167 aa6.26□□□□□ -1.41
CASC19-260ENST00000641828 ECE2O60344 883 aa6.26□□□□□ -1.41
CASC19-260ENST00000641828 PFDN1O60925 122 aa6.26□□□□□ -1.41
CASC19-260ENST00000641828 TJP3O95049 919 aa6.26□□□□□ -1.41
CASC19-260ENST00000641828 EYA4O95677 639 aa6.26□□□□□ -1.41
CASC19-260ENST00000641828 CAPNS1P04632 268 aa6.26□□□□□ -1.41
CASC19-260ENST00000641828 SERPING1P05155 500 aa6.26□□□□□ -1.41
CASC19-260ENST00000641828 FAM200BP0CF97 657 aa6.26□□□□□ -1.41
CASC19-260ENST00000641828 VSIG8P0DPA2 414 aa6.26□□□□□ -1.41
CASC19-260ENST00000641828 ADH5P11766 374 aa6.26□□□□□ -1.41
CASC19-260ENST00000641828 KLRC1P26715 233 aa6.26□□□□□ -1.41
CASC19-260ENST00000641828 LONP1P36776 959 aaKnown RBP6.26□□□□□ -1.41
CASC19-260ENST00000641828 TRAPPC10P48553 1259 aa6.26□□□□□ -1.41
CASC19-260ENST00000641828 USP11P51784 963 aa6.26□□□□□ -1.41
CASC19-260ENST00000641828 PMS2P54278 862 aa6.26□□□□□ -1.41
CASC19-260ENST00000641828 MCL1Q07820 350 aa6.26□□□□□ -1.41
CASC19-260ENST00000641828 LSAMPQ13449 338 aa6.26□□□□□ -1.41
CASC19-260ENST00000641828 MAP7Q14244 749 aa6.26□□□□□ -1.41
CASC19-260ENST00000641828 ZNF174Q15697 407 aa6.26□□□□□ -1.41
CASC19-260ENST00000641828 Q4G0T1 1027 aa6.26□□□□□ -1.41
CASC19-260ENST00000641828 VWA3BQ502W6 1294 aa6.26□□□□□ -1.41
CASC19-260ENST00000641828 TTC38Q5R3I4 469 aa6.26□□□□□ -1.41
CASC19-260ENST00000641828 TRAPPC3LQ5T215 181 aa6.26□□□□□ -1.41
CASC19-260ENST00000641828 CEP128Q6ZU80 1094 aa6.26□□□□□ -1.41
CASC19-260ENST00000641828 TBC1D10CQ8IV04 446 aa6.26□□□□□ -1.41
CASC19-260ENST00000641828 XAGE3Q8WTP9 111 aa6.26□□□□□ -1.41
CASC19-260ENST00000641828 UTP4Q969X6 686 aaKnown RBP6.26□□□□□ -1.41
CASC19-260ENST00000641828 NR1H4Q96RI1 486 aaPredicted RBP6.26□□□□□ -1.41
CASC19-260ENST00000641828 LZTS2Q9BRK4 669 aa6.26□□□□□ -1.41
CASC19-260ENST00000641828 MYL10Q9BUA6 226 aa6.26□□□□□ -1.41
CASC19-260ENST00000641828 DDX23Q9BUQ8 820 aaKnown RBP6.26□□□□□ -1.41
CASC19-260ENST00000641828 PHF20Q9BVI0 1012 aa6.26□□□□□ -1.41
CASC19-260ENST00000641828 SPATA16Q9BXB7 569 aa6.26□□□□□ -1.41
CASC19-260ENST00000641828 MAF1Q9H063 256 aa6.26□□□□□ -1.41
CASC19-260ENST00000641828 RMI1Q9H9A7 625 aa6.26□□□□□ -1.41
CASC19-260ENST00000641828 AIPL1Q9NZN9 384 aa6.26□□□□□ -1.41
CASC19-260ENST00000641828 ZSWIM5Q9P217 1185 aa6.26□□□□□ -1.41
CASC19-260ENST00000641828 SEC63Q9UGP8 760 aaKnown RBP6.26□□□□□ -1.41
CASC19-260ENST00000641828 WDR37Q9Y2I8 494 aa6.26□□□□□ -1.41
CASC19-260ENST00000641828 ZNF451Q9Y4E5 1061 aa6.26□□□□□ -1.41
CASC19-260ENST00000641828 ATAD5Q96QE3 1844 aa6.26□□□□□ -1.41
CASC19-260ENST00000641828 SIPA1L3O60292 1781 aaPredicted RBP6.26□□□□□ -1.41
CASC19-260ENST00000641828 MEGF11A6BM72 1044 aa6.26□□□□□ -1.41
CASC19-260ENST00000641828 SIGLEC16A6NMB1 481 aa6.26□□□□□ -1.41
CASC19-260ENST00000641828 TCP11X1B4DZS4 312 aa6.26□□□□□ -1.41
CASC19-260ENST00000641828 KLRC4O43908 158 aa6.26□□□□□ -1.41
CASC19-260ENST00000641828 CEP104O60308 925 aa6.26□□□□□ -1.41
CASC19-260ENST00000641828 PPM1BO75688 479 aa6.26□□□□□ -1.41
CASC19-260ENST00000641828 CIAO1O76071 339 aa6.26□□□□□ -1.41
CASC19-260ENST00000641828 WISP1O95388 367 aa6.26□□□□□ -1.41
CASC19-260ENST00000641828 FGFR1OPO95684 399 aaKnown RBP6.26□□□□□ -1.41
CASC19-260ENST00000641828 AFPP02771 609 aaKnown RBP6.26□□□□□ -1.41
CASC19-260ENST00000641828 RPL13P26373 211 aaKnown RBP6.26□□□□□ -1.41
CASC19-260ENST00000641828 IFNAR2P48551 515 aa6.26□□□□□ -1.41
CASC19-260ENST00000641828 DNA2P51530 1060 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms