RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 HEXIM2Q96MH2 286 aaKnown RBP17.43■□□□□ 0.38
PHGDH-216ENST00000641375 STIM2Q9P246 746 aa17.43■□□□□ 0.38
PHGDH-216ENST00000641375 NOD1Q9Y239 953 aa17.43■□□□□ 0.38
PHGDH-216ENST00000641375 FKTNO75072 461 aa17.43■□□□□ 0.38
PHGDH-216ENST00000641375 PROSCO94903 275 aa17.43■□□□□ 0.38
PHGDH-216ENST00000641375 PPP2R5EQ16537 467 aa17.43■□□□□ 0.38
PHGDH-216ENST00000641375 SEL1L2Q5TEA6 688 aa17.43■□□□□ 0.38
PHGDH-216ENST00000641375 FEZF2Q8TBJ5 459 aa17.43■□□□□ 0.38
PHGDH-216ENST00000641375 KRT35Q92764 455 aa17.43■□□□□ 0.38
PHGDH-216ENST00000641375 GLT1D1Q96MS3 346 aa17.43■□□□□ 0.38
PHGDH-216ENST00000641375 TSEN34Q9BSV6 310 aaKnown RBP17.43■□□□□ 0.38
PHGDH-216ENST00000641375 FAM105AQ9NUU6 356 aa17.43■□□□□ 0.38
PHGDH-216ENST00000641375 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.43■□□□□ 0.38
PHGDH-216ENST00000641375 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.43■□□□□ 0.38
PHGDH-216ENST00000641375 RWDD2BP57060 319 aa17.42■□□□□ 0.38
PHGDH-216ENST00000641375 LONRF2Q1L5Z9 754 aa17.42■□□□□ 0.38
PHGDH-216ENST00000641375 DENND1BQ6P3S1 775 aa17.42■□□□□ 0.38
PHGDH-216ENST00000641375 PHLDB2Q86SQ0 1253 aa17.42■□□□□ 0.38
PHGDH-216ENST00000641375 KRT12Q99456 494 aa17.42■□□□□ 0.38
PHGDH-216ENST00000641375 TSPYL1Q9H0U9 437 aa17.42■□□□□ 0.38
PHGDH-216ENST00000641375 HMX1Q9NP08 348 aaPredicted RBP17.42■□□□□ 0.38
PHGDH-216ENST00000641375 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.42■□□□□ 0.38
PHGDH-216ENST00000641375 GOLGA6L10A0A0M3HER8 536 aa17.42■□□□□ 0.38
PHGDH-216ENST00000641375 PPEF2O14830 753 aa17.42■□□□□ 0.38
PHGDH-216ENST00000641375 HSPA6P17066 643 aa17.42■□□□□ 0.38
PHGDH-216ENST00000641375 ORC1Q13415 861 aa17.42■□□□□ 0.38
PHGDH-216ENST00000641375 LLGL2Q6P1M3 1020 aa17.42■□□□□ 0.38
PHGDH-216ENST00000641375 DNAJC24Q6P3W2 148 aa17.42■□□□□ 0.38
PHGDH-216ENST00000641375 UNC93AQ86WB7 457 aa17.42■□□□□ 0.38
PHGDH-216ENST00000641375 C3orf20Q8ND61 904 aa17.42■□□□□ 0.38
PHGDH-216ENST00000641375 DNAI2Q9GZS0 605 aa17.42■□□□□ 0.38
PHGDH-216ENST00000641375 SLC38A7Q9NVC3 462 aa17.42■□□□□ 0.38
PHGDH-216ENST00000641375 IP6K2Q9UHH9 426 aa17.42■□□□□ 0.38
PHGDH-216ENST00000641375 KPNA7A9QM74 516 aa17.41■□□□□ 0.38
PHGDH-216ENST00000641375 SEC31AO94979 1220 aaKnown RBP17.41■□□□□ 0.38
PHGDH-216ENST00000641375 INHAP05111 366 aa17.41■□□□□ 0.38
PHGDH-216ENST00000641375 ITGA4P13612 1032 aa17.41■□□□□ 0.38
PHGDH-216ENST00000641375 MAN1A1P33908 653 aa17.41■□□□□ 0.38
PHGDH-216ENST00000641375 SV2CQ496J9 727 aa17.41■□□□□ 0.38
PHGDH-216ENST00000641375 BEND6Q5SZJ8 279 aaPredicted RBP17.41■□□□□ 0.38
PHGDH-216ENST00000641375 ARRDC4Q8NCT1 418 aa17.41■□□□□ 0.38
PHGDH-216ENST00000641375 AP1M1Q9BXS5 423 aa17.41■□□□□ 0.38
PHGDH-216ENST00000641375 TRIM7Q9C029 511 aa17.41■□□□□ 0.38
PHGDH-216ENST00000641375 GDAP2Q9NXN4 497 aa17.41■□□□□ 0.38
PHGDH-216ENST00000641375 WDR35Q9P2L0 1181 aa17.41■□□□□ 0.38
PHGDH-216ENST00000641375 DMGDHQ9UI17 866 aaKnown RBP17.41■□□□□ 0.38
PHGDH-216ENST00000641375 TULP2O00295 520 aa17.4■□□□□ 0.38
PHGDH-216ENST00000641375 O00370 1275 aa17.4■□□□□ 0.38
PHGDH-216ENST00000641375 CAND2O75155 1236 aa17.4■□□□□ 0.38
PHGDH-216ENST00000641375 MICAL2O94851 1124 aa17.4■□□□□ 0.38
PHGDH-216ENST00000641375 MARCKSL1P49006 195 aa17.4■□□□□ 0.38
PHGDH-216ENST00000641375 TAF6P49848 677 aa17.4■□□□□ 0.38
PHGDH-216ENST00000641375 GSCP56915 257 aaPredicted RBP17.4■□□□□ 0.38
PHGDH-216ENST00000641375 PAK2Q13177 524 aa17.4■□□□□ 0.38
PHGDH-216ENST00000641375 ZNF211Q13398 564 aaPredicted RBP17.4■□□□□ 0.38
PHGDH-216ENST00000641375 TERF2Q15554 542 aa17.4■□□□□ 0.38
PHGDH-216ENST00000641375 TRAIPQ9BWF2 469 aa17.4■□□□□ 0.38
PHGDH-216ENST00000641375 SLITRK6Q9H5Y7 841 aa17.4■□□□□ 0.38
PHGDH-216ENST00000641375 SAGE1Q9NXZ1 904 aa17.4■□□□□ 0.38
PHGDH-216ENST00000641375 CALCOCO1Q9P1Z2 691 aa17.4■□□□□ 0.38
PHGDH-216ENST00000641375 SQORQ9Y6N5 450 aa17.4■□□□□ 0.38
PHGDH-216ENST00000641375 TCRBV5S1A1TA0A578 114 aa17.4■□□□□ 0.38
PHGDH-216ENST00000641375 TMEM191CA6NGB0 347 aa17.4■□□□□ 0.38
PHGDH-216ENST00000641375 M0QYV0 167 aa17.4■□□□□ 0.38
PHGDH-216ENST00000641375 LRPAP1P30533 357 aa17.4■□□□□ 0.38
PHGDH-216ENST00000641375 RAB27AP51159 221 aa17.4■□□□□ 0.38
PHGDH-216ENST00000641375 FAM26DQ5JW98 314 aa17.4■□□□□ 0.38
PHGDH-216ENST00000641375 DCUN1D2Q6PH85 259 aa17.4■□□□□ 0.38
PHGDH-216ENST00000641375 LCLAT1Q6UWP7 414 aa17.4■□□□□ 0.38
PHGDH-216ENST00000641375 KLHL7Q8IXQ5 586 aa17.4■□□□□ 0.38
PHGDH-216ENST00000641375 HDAC7Q8WUI4 952 aa17.4■□□□□ 0.38
PHGDH-216ENST00000641375 C18orf8Q96DM3 657 aa17.4■□□□□ 0.38
PHGDH-216ENST00000641375 PPP1R10Q96QC0 940 aaKnown RBP17.4■□□□□ 0.38
PHGDH-216ENST00000641375 MRPL45Q9BRJ2 306 aaKnown RBP17.4■□□□□ 0.38
PHGDH-216ENST00000641375 SYNCQ9H7C4 482 aa17.4■□□□□ 0.38
PHGDH-216ENST00000641375 ERVK-5Q9HDB9 667 aa17.4■□□□□ 0.38
PHGDH-216ENST00000641375 PADI3Q9ULW8 664 aa17.4■□□□□ 0.38
PHGDH-216ENST00000641375 FRMPD3Q5JV73 1810 aa17.39■□□□□ 0.37
PHGDH-216ENST00000641375 PSTPIP1O43586 416 aa17.39■□□□□ 0.37
PHGDH-216ENST00000641375 TNFRSF8P28908 595 aa17.39■□□□□ 0.37
PHGDH-216ENST00000641375 GRK4P32298 578 aa17.39■□□□□ 0.37
PHGDH-216ENST00000641375 SLC7A5Q01650 507 aa17.39■□□□□ 0.37
PHGDH-216ENST00000641375 SOWAHAQ2M3V2 549 aa17.39■□□□□ 0.37
PHGDH-216ENST00000641375 PTPN20Q4JDL3 420 aa17.39■□□□□ 0.37
PHGDH-216ENST00000641375 CCNI2Q6ZMN8 369 aaPredicted RBP17.39■□□□□ 0.37
PHGDH-216ENST00000641375 IFT20Q8IY31 132 aa17.39■□□□□ 0.37
PHGDH-216ENST00000641375 CCDC26Q8TAB7 109 aa17.39■□□□□ 0.37
PHGDH-216ENST00000641375 ZNF296Q8WUU4 475 aaPredicted RBP17.39■□□□□ 0.37
PHGDH-216ENST00000641375 MIS12Q9H081 205 aa17.39■□□□□ 0.37
PHGDH-216ENST00000641375 AGO3Q9H9G7 860 aaKnown RBP17.39■□□□□ 0.37
PHGDH-216ENST00000641375 TRMT13Q9NUP7 481 aaKnown RBP17.39■□□□□ 0.37
PHGDH-216ENST00000641375 RNF19AQ9NV58 838 aa17.39■□□□□ 0.37
PHGDH-216ENST00000641375 GIT1Q9Y2X7 761 aa17.39■□□□□ 0.37
PHGDH-216ENST00000641375 PTGESO14684 152 aa17.39■□□□□ 0.37
PHGDH-216ENST00000641375 SART1O43290 800 aaKnown RBP17.39■□□□□ 0.37
PHGDH-216ENST00000641375 ZMYND10O75800 440 aa17.39■□□□□ 0.37
PHGDH-216ENST00000641375 GPD2P43304 727 aa17.39■□□□□ 0.37
PHGDH-216ENST00000641375 SOX4Q06945 474 aaPredicted RBP17.39■□□□□ 0.37
PHGDH-216ENST00000641375 PPP1R15BQ5SWA1 713 aa17.39■□□□□ 0.37
PHGDH-216ENST00000641375 MAATS1Q7Z4T9 603 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms