RNA–Protein interactions for RNA: ENST00000640900.1

SCARB2-225, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-225ENST00000640900 FSCN2O14926 492 aa9.73□□□□□ -0.85
SCARB2-225ENST00000640900 MFAP3LO75121 409 aa9.73□□□□□ -0.85
SCARB2-225ENST00000640900 PAEPP09466 180 aa9.73□□□□□ -0.85
SCARB2-225ENST00000640900 CTSAP10619 480 aa9.73□□□□□ -0.85
SCARB2-225ENST00000640900 LMO2P25791 158 aa9.73□□□□□ -0.85
SCARB2-225ENST00000640900 KRT9P35527 623 aa9.73□□□□□ -0.85
SCARB2-225ENST00000640900 GNL1P36915 607 aaPredicted RBP9.73□□□□□ -0.85
SCARB2-225ENST00000640900 RAP1GAPP47736 663 aa9.73□□□□□ -0.85
SCARB2-225ENST00000640900 USP41Q3LFD5 358 aa9.73□□□□□ -0.85
SCARB2-225ENST00000640900 RTP2Q5QGT7 225 aa9.73□□□□□ -0.85
SCARB2-225ENST00000640900 VARS2Q5ST30 1063 aaKnown RBP9.73□□□□□ -0.85
SCARB2-225ENST00000640900 FAM171A1Q5VUB5 890 aa9.73□□□□□ -0.85
SCARB2-225ENST00000640900 DSTYKQ6XUX3 929 aa9.73□□□□□ -0.85
SCARB2-225ENST00000640900 FMNL3Q8IVF7 1028 aa9.73□□□□□ -0.85
SCARB2-225ENST00000640900 SLC4A11Q8NBS3 891 aa9.73□□□□□ -0.85
SCARB2-225ENST00000640900 OR8K1Q8NGG5 319 aa9.73□□□□□ -0.85
SCARB2-225ENST00000640900 LNX1Q8TBB1 728 aaPredicted RBP9.73□□□□□ -0.85
SCARB2-225ENST00000640900 HASPINQ8TF76 798 aa9.73□□□□□ -0.85
SCARB2-225ENST00000640900 TMEM169Q96HH4 297 aa9.73□□□□□ -0.85
SCARB2-225ENST00000640900 PANX2Q96RD6 677 aa9.73□□□□□ -0.85
SCARB2-225ENST00000640900 MMS19Q96T76 1030 aa9.73□□□□□ -0.85
SCARB2-225ENST00000640900 C17orf80Q9BSJ5 609 aa9.73□□□□□ -0.85
SCARB2-225ENST00000640900 TTPALQ9BTX7 342 aa9.73□□□□□ -0.85
SCARB2-225ENST00000640900 ZBP1Q9H171 429 aa9.73□□□□□ -0.85
SCARB2-225ENST00000640900 NLRC4Q9NPP4 1024 aa9.73□□□□□ -0.85
SCARB2-225ENST00000640900 MTRRQ9UBK8 725 aa9.73□□□□□ -0.85
SCARB2-225ENST00000640900 NOCTQ9UK39 431 aaKnown RBP9.73□□□□□ -0.85
SCARB2-225ENST00000640900 KIAA1257Q9ULG3 409 aa9.73□□□□□ -0.85
SCARB2-225ENST00000640900 PLXNA4Q9HCM2 1894 aa9.72□□□□□ -0.85
SCARB2-225ENST00000640900 OR6C75A6NL08 312 aa9.72□□□□□ -0.85
SCARB2-225ENST00000640900 LRRC53A6NM62 1247 aa9.72□□□□□ -0.85
SCARB2-225ENST00000640900 AKR1B15C9JRZ8 316 aaPredicted RBP9.72□□□□□ -0.85
SCARB2-225ENST00000640900 CYP26A1O43174 497 aa9.72□□□□□ -0.85
SCARB2-225ENST00000640900 HCRTO43612 131 aa9.72□□□□□ -0.85
SCARB2-225ENST00000640900 C1RP00736 705 aa9.72□□□□□ -0.85
SCARB2-225ENST00000640900 PNMA6AP0CW24 399 aaPredicted RBP9.72□□□□□ -0.85
SCARB2-225ENST00000640900 DNAJB1P25685 340 aa9.72□□□□□ -0.85
SCARB2-225ENST00000640900 DNAJB2P25686 324 aa9.72□□□□□ -0.85
SCARB2-225ENST00000640900 STAT1P42224 750 aa9.72□□□□□ -0.85
SCARB2-225ENST00000640900 NDST1P52848 882 aa9.72□□□□□ -0.85
SCARB2-225ENST00000640900 YWHAHQ04917 246 aaPredicted RBP9.72□□□□□ -0.85
SCARB2-225ENST00000640900 ASTE1Q2TB18 679 aaPredicted RBP9.72□□□□□ -0.85
SCARB2-225ENST00000640900 PKDCCQ504Y2 493 aa9.72□□□□□ -0.85
SCARB2-225ENST00000640900 PRPF38BQ5VTL8 546 aaKnown RBP9.72□□□□□ -0.85
SCARB2-225ENST00000640900 ARHGAP17Q68EM7 881 aa9.72□□□□□ -0.85
SCARB2-225ENST00000640900 OVOS1Q6IE37 1185 aa9.72□□□□□ -0.85
SCARB2-225ENST00000640900 SLC8B1Q6J4K2 584 aa9.72□□□□□ -0.85
SCARB2-225ENST00000640900 TMEM270Q6UE05 265 aa9.72□□□□□ -0.85
SCARB2-225ENST00000640900 RSPO2Q6UXX9 243 aaPredicted RBP9.72□□□□□ -0.85
SCARB2-225ENST00000640900 SCARA5Q6ZMJ2 495 aa9.72□□□□□ -0.85
SCARB2-225ENST00000640900 ANKS3Q6ZW76 656 aa9.72□□□□□ -0.85
SCARB2-225ENST00000640900 PPFIBP1Q86W92 1011 aa9.72□□□□□ -0.85
SCARB2-225ENST00000640900 TMEM139Q8IV31 216 aa9.72□□□□□ -0.85
SCARB2-225ENST00000640900 CNGA4Q8IV77 575 aa9.72□□□□□ -0.85
SCARB2-225ENST00000640900 RBBP8NLQ8NC74 664 aaPredicted RBP9.72□□□□□ -0.85
SCARB2-225ENST00000640900 OR10T2Q8NGX3 314 aa9.72□□□□□ -0.85
SCARB2-225ENST00000640900 EPS8L1Q8TE68 723 aa9.72□□□□□ -0.85
SCARB2-225ENST00000640900 TFAP2BQ92481 460 aa9.72□□□□□ -0.85
SCARB2-225ENST00000640900 TMEM176AQ96HP8 235 aa9.72□□□□□ -0.85
SCARB2-225ENST00000640900 PCMTD1Q96MG8 357 aaPredicted RBP9.72□□□□□ -0.85
SCARB2-225ENST00000640900 C11orf84Q9BUA3 381 aaPredicted RBP9.72□□□□□ -0.85
SCARB2-225ENST00000640900 NT5C1AQ9BXI3 368 aa9.72□□□□□ -0.85
SCARB2-225ENST00000640900 ZCWPW1Q9H0M4 648 aa9.72□□□□□ -0.85
SCARB2-225ENST00000640900 NKX2-4Q9H2Z4 354 aa9.72□□□□□ -0.85
SCARB2-225ENST00000640900 CRTAC1Q9NQ79 661 aa9.72□□□□□ -0.85
SCARB2-225ENST00000640900 ABHD10Q9NUJ1 306 aa9.72□□□□□ -0.85
SCARB2-225ENST00000640900 FNIP2Q9P278 1114 aa9.72□□□□□ -0.85
SCARB2-225ENST00000640900 CDH9Q9ULB4 789 aa9.72□□□□□ -0.85
SCARB2-225ENST00000640900 NENFQ9UMX5 172 aa9.72□□□□□ -0.85
SCARB2-225ENST00000640900 COLQQ9Y215 455 aaPredicted RBP9.72□□□□□ -0.85
SCARB2-225ENST00000640900 TIMM13Q9Y5L4 95 aaPredicted RBP9.72□□□□□ -0.85
SCARB2-225ENST00000640900 TMEM265A0A087WTH1 108 aa9.71□□□□□ -0.86
SCARB2-225ENST00000640900 TULP1O00294 542 aaPredicted RBP9.71□□□□□ -0.86
SCARB2-225ENST00000640900 LPXNO60711 386 aa9.71□□□□□ -0.86
SCARB2-225ENST00000640900 VNN2O95498 520 aa9.71□□□□□ -0.86
SCARB2-225ENST00000640900 CYP11B1P15538 503 aa9.71□□□□□ -0.86
SCARB2-225ENST00000640900 FERP16591 822 aa9.71□□□□□ -0.86
SCARB2-225ENST00000640900 CHRNB2P17787 502 aa9.71□□□□□ -0.86
SCARB2-225ENST00000640900 PTPN1P18031 435 aaKnown RBP9.71□□□□□ -0.86
SCARB2-225ENST00000640900 PCSK1P29120 753 aa9.71□□□□□ -0.86
SCARB2-225ENST00000640900 CTNNB1P35222 781 aa9.71□□□□□ -0.86
SCARB2-225ENST00000640900 GLUD2P49448 558 aa9.71□□□□□ -0.86
SCARB2-225ENST00000640900 ADKP55263 362 aaKnown RBP9.71□□□□□ -0.86
SCARB2-225ENST00000640900 GSDMDP57764 484 aa9.71□□□□□ -0.86
SCARB2-225ENST00000640900 BPIFB4P59827 614 aa9.71□□□□□ -0.86
SCARB2-225ENST00000640900 KRT17Q04695 432 aa9.71□□□□□ -0.86
SCARB2-225ENST00000640900 RAPGEF1Q13905 1077 aa9.71□□□□□ -0.86
SCARB2-225ENST00000640900 PTPN14Q15678 1187 aa9.71□□□□□ -0.86
SCARB2-225ENST00000640900 CNGA2Q16280 664 aa9.71□□□□□ -0.86
SCARB2-225ENST00000640900 ARHGAP44Q17R89 818 aa9.71□□□□□ -0.86
SCARB2-225ENST00000640900 INTS6LQ5JSJ4 861 aaKnown RBP9.71□□□□□ -0.86
SCARB2-225ENST00000640900 SPOUT1Q5T280 376 aaKnown RBP9.71□□□□□ -0.86
SCARB2-225ENST00000640900 SFMBT2Q5VUG0 894 aa9.71□□□□□ -0.86
SCARB2-225ENST00000640900 PAQR9Q6ZVX9 377 aa9.71□□□□□ -0.86
SCARB2-225ENST00000640900 CACNA2D4Q7Z3S7 1137 aa9.71□□□□□ -0.86
SCARB2-225ENST00000640900 LRRTM3Q86VH5 581 aa9.71□□□□□ -0.86
SCARB2-225ENST00000640900 SLC47A2Q86VL8 602 aa9.71□□□□□ -0.86
SCARB2-225ENST00000640900 VPS52Q8N1B4 723 aa9.71□□□□□ -0.86
SCARB2-225ENST00000640900 ZNF397Q8NF99 534 aaPredicted RBP9.71□□□□□ -0.86
SCARB2-225ENST00000640900 SLC30A5Q8TAD4 765 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms