RNA–Protein interactions for RNA: ENST00000640413.1

AP3S1-209, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 5 BASIC

Gene AP3S1, Length 489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-209ENST00000640413 CAAP1Q9H8G2 361 aa4.71□□□□□ -1.66
AP3S1-209ENST00000640413 DLL3Q9NYJ7 618 aa4.71□□□□□ -1.66
AP3S1-209ENST00000640413 QSOX1O00391 747 aa4.7□□□□□ -1.66
AP3S1-209ENST00000640413 ADAMTS3O15072 1205 aa4.7□□□□□ -1.66
AP3S1-209ENST00000640413 PPM1DO15297 605 aa4.7□□□□□ -1.66
AP3S1-209ENST00000640413 VPS4BO75351 444 aa4.7□□□□□ -1.66
AP3S1-209ENST00000640413 NXPH3O95157 252 aa4.7□□□□□ -1.66
AP3S1-209ENST00000640413 ANXA1P04083 346 aa4.7□□□□□ -1.66
AP3S1-209ENST00000640413 CCKARP32238 428 aa4.7□□□□□ -1.66
AP3S1-209ENST00000640413 ALDH9A1P49189 494 aa4.7□□□□□ -1.66
AP3S1-209ENST00000640413 PLCD1P51178 756 aa4.7□□□□□ -1.66
AP3S1-209ENST00000640413 LINC00205P59089 165 aa4.7□□□□□ -1.66
AP3S1-209ENST00000640413 DAZAP2Q15038 168 aaPredicted RBP4.7□□□□□ -1.66
AP3S1-209ENST00000640413 PCID2Q5JVF3 399 aa4.7□□□□□ -1.66
AP3S1-209ENST00000640413 LCE1EQ5T753 118 aa4.7□□□□□ -1.66
AP3S1-209ENST00000640413 ANKRD16Q6P6B7 361 aa4.7□□□□□ -1.66
AP3S1-209ENST00000640413 NAPRTQ6XQN6 538 aa4.7□□□□□ -1.66
AP3S1-209ENST00000640413 GALNT16Q8N428 558 aa4.7□□□□□ -1.66
AP3S1-209ENST00000640413 COG1Q8WTW3 980 aa4.7□□□□□ -1.66
AP3S1-209ENST00000640413 SCAMP4Q969E2 229 aa4.7□□□□□ -1.66
AP3S1-209ENST00000640413 CLPTM1LQ96KA5 538 aa4.7□□□□□ -1.66
AP3S1-209ENST00000640413 MACROD1Q9BQ69 325 aa4.7□□□□□ -1.66
AP3S1-209ENST00000640413 TMEM79Q9BSE2 394 aa4.7□□□□□ -1.66
AP3S1-209ENST00000640413 SAP30BPQ9UHR5 308 aaKnown RBP4.7□□□□□ -1.66
AP3S1-209ENST00000640413 TUBD1Q9UJT1 453 aa4.7□□□□□ -1.66
AP3S1-209ENST00000640413 AFG3L2Q9Y4W6 797 aa4.7□□□□□ -1.66
AP3S1-209ENST00000640413 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.7□□□□□ -1.66
AP3S1-209ENST00000640413 FNDC1Q4ZHG4 1894 aaPredicted RBP4.7□□□□□ -1.66
AP3S1-209ENST00000640413 IGKV2D-30A0A075B6S6 120 aa4.69□□□□□ -1.66
AP3S1-209ENST00000640413 CYP2D7A0A087X1C5 515 aa4.69□□□□□ -1.66
AP3S1-209ENST00000640413 ZNF785A8K8V0 405 aa4.69□□□□□ -1.66
AP3S1-209ENST00000640413 CD6P30203 668 aa4.69□□□□□ -1.66
AP3S1-209ENST00000640413 CYP2C18P33260 490 aa4.69□□□□□ -1.66
AP3S1-209ENST00000640413 SOX5P35711 763 aa4.69□□□□□ -1.66
AP3S1-209ENST00000640413 EEFSECP57772 596 aaKnown RBP4.69□□□□□ -1.66
AP3S1-209ENST00000640413 ERVK-21P61565 698 aa4.69□□□□□ -1.66
AP3S1-209ENST00000640413 RAB39AQ14964 217 aa4.69□□□□□ -1.66
AP3S1-209ENST00000640413 TRIP6Q15654 476 aaKnown RBP4.69□□□□□ -1.66
AP3S1-209ENST00000640413 CLUL1Q15846 466 aa4.69□□□□□ -1.66
AP3S1-209ENST00000640413 Q4G0T1 1027 aa4.69□□□□□ -1.66
AP3S1-209ENST00000640413 AFAP1L2Q8N4X5 818 aa4.69□□□□□ -1.66
AP3S1-209ENST00000640413 HDAC10Q969S8 669 aa4.69□□□□□ -1.66
AP3S1-209ENST00000640413 DMRTA2Q96SC8 542 aa4.69□□□□□ -1.66
AP3S1-209ENST00000640413 WASHC2AQ641Q2 1341 aa4.69□□□□□ -1.66
AP3S1-209ENST00000640413 ENPP3O14638 875 aa4.68□□□□□ -1.66
AP3S1-209ENST00000640413 SGTAO43765 313 aa4.68□□□□□ -1.66
AP3S1-209ENST00000640413 EYA4O95677 639 aa4.68□□□□□ -1.66
AP3S1-209ENST00000640413 ITGALP20701 1170 aa4.68□□□□□ -1.66
AP3S1-209ENST00000640413 CYP4F2P78329 520 aa4.68□□□□□ -1.66
AP3S1-209ENST00000640413 HABP2Q14520 560 aaPredicted RBP4.68□□□□□ -1.66
AP3S1-209ENST00000640413 C3orf36Q3SXR2 165 aa4.68□□□□□ -1.66
AP3S1-209ENST00000640413 CCDC93Q567U6 631 aa4.68□□□□□ -1.66
AP3S1-209ENST00000640413 ZNF618Q5T7W0 954 aa4.68□□□□□ -1.66
AP3S1-209ENST00000640413 MAVSQ7Z434 540 aa4.68□□□□□ -1.66
AP3S1-209ENST00000640413 ZNF804AQ7Z570 1209 aa4.68□□□□□ -1.66
AP3S1-209ENST00000640413 IRF2BP2Q7Z5L9 587 aa4.68□□□□□ -1.66
AP3S1-209ENST00000640413 FAM109AQ8N4B1 249 aa4.68□□□□□ -1.66
AP3S1-209ENST00000640413 NANOGP1Q8N7R0 232 aa4.68□□□□□ -1.66
AP3S1-209ENST00000640413 NRACQ8N912 160 aa4.68□□□□□ -1.66
AP3S1-209ENST00000640413 C8orf58Q8NAV2 365 aa4.68□□□□□ -1.66
AP3S1-209ENST00000640413 KAT5Q92993 513 aa4.68□□□□□ -1.66
AP3S1-209ENST00000640413 ASB2Q96Q27 587 aa4.68□□□□□ -1.66
AP3S1-209ENST00000640413 TRNAU1APQ9NX07 287 aaKnown RBP4.68□□□□□ -1.66
AP3S1-209ENST00000640413 AGAP1Q9UPQ3 857 aa4.68□□□□□ -1.66
AP3S1-209ENST00000640413 MYMKA6NI61 221 aa4.67□□□□□ -1.66
AP3S1-209ENST00000640413 NDUFS2O75306 463 aa4.67□□□□□ -1.66
AP3S1-209ENST00000640413 ENGP17813 658 aa4.67□□□□□ -1.66
AP3S1-209ENST00000640413 LIPAP38571 399 aa4.67□□□□□ -1.66
AP3S1-209ENST00000640413 TOB1P50616 345 aaPredicted RBP4.67□□□□□ -1.66
AP3S1-209ENST00000640413 CLCN2P51788 898 aa4.67□□□□□ -1.66
AP3S1-209ENST00000640413 ZNF135P52742 658 aaPredicted RBP4.67□□□□□ -1.66
AP3S1-209ENST00000640413 MIDNQ504T8 468 aa4.67□□□□□ -1.66
AP3S1-209ENST00000640413 CT47A1Q5JQC4 288 aaPredicted RBP4.67□□□□□ -1.66
AP3S1-209ENST00000640413 MIS18BP1Q6P0N0 1132 aa4.67□□□□□ -1.66
AP3S1-209ENST00000640413 PDSS2Q86YH6 399 aa4.67□□□□□ -1.66
AP3S1-209ENST00000640413 AMOTL1Q8IY63 956 aa4.67□□□□□ -1.66
AP3S1-209ENST00000640413 PRSS3P2Q8NHM4 247 aa4.67□□□□□ -1.66
AP3S1-209ENST00000640413 VRK1Q99986 396 aaPredicted RBP4.67□□□□□ -1.66
AP3S1-209ENST00000640413 BRD9Q9H8M2 597 aa4.67□□□□□ -1.66
AP3S1-209ENST00000640413 CALCOCO1Q9P1Z2 691 aa4.67□□□□□ -1.66
AP3S1-209ENST00000640413 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.67□□□□□ -1.66
AP3S1-209ENST00000640413 LIMCH1Q9UPQ0 1083 aa4.67□□□□□ -1.66
AP3S1-209ENST00000640413 IPPQ9Y573 584 aa4.67□□□□□ -1.66
AP3S1-209ENST00000640413 PRR23D1E9PI22 279 aaPredicted RBP4.66□□□□□ -1.66
AP3S1-209ENST00000640413 F2RL2O00254 374 aa4.66□□□□□ -1.66
AP3S1-209ENST00000640413 SOCS2O14508 198 aa4.66□□□□□ -1.66
AP3S1-209ENST00000640413 GPR39O43194 453 aa4.66□□□□□ -1.66
AP3S1-209ENST00000640413 HTRA2O43464 458 aaPredicted RBP4.66□□□□□ -1.66
AP3S1-209ENST00000640413 BCAR3O75815 825 aa4.66□□□□□ -1.66
AP3S1-209ENST00000640413 KIF20AO95235 890 aa4.66□□□□□ -1.66
AP3S1-209ENST00000640413 GJB1P08034 283 aa4.66□□□□□ -1.66
AP3S1-209ENST00000640413 PRR23D2P0DMB1 279 aaPredicted RBP4.66□□□□□ -1.66
AP3S1-209ENST00000640413 EDNRBP24530 442 aa4.66□□□□□ -1.66
AP3S1-209ENST00000640413 HOXA4Q00056 320 aaPredicted RBP4.66□□□□□ -1.66
AP3S1-209ENST00000640413 SP2Q02086 613 aa4.66□□□□□ -1.66
AP3S1-209ENST00000640413 TREML2Q5T2D2 321 aa4.66□□□□□ -1.66
AP3S1-209ENST00000640413 TEDDM1Q5T9Z0 273 aa4.66□□□□□ -1.66
AP3S1-209ENST00000640413 WDR53Q7Z5U6 358 aaPredicted RBP4.66□□□□□ -1.66
AP3S1-209ENST00000640413 CYP2W1Q8TAV3 490 aa4.66□□□□□ -1.66
AP3S1-209ENST00000640413 CHAC2Q8WUX2 184 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms