RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 SH3TC2Q8TF17 1288 aa19.28■□□□□ 0.68
SCARB2-213ENST00000638680 MADDQ8WXG6 1647 aa19.28■□□□□ 0.68
SCARB2-213ENST00000638680 SGPL1O95470 568 aa19.28■□□□□ 0.68
SCARB2-213ENST00000638680 FAM49BQ9NUQ9 324 aa19.28■□□□□ 0.68
SCARB2-213ENST00000638680 TMEM161AQ9NX61 479 aa19.28■□□□□ 0.68
SCARB2-213ENST00000638680 EXTL3O43909 919 aa19.28■□□□□ 0.68
SCARB2-213ENST00000638680 BLVRAP53004 296 aa19.28■□□□□ 0.68
SCARB2-213ENST00000638680 KCNK10P57789 538 aa19.28■□□□□ 0.68
SCARB2-213ENST00000638680 PDK1Q15118 436 aa19.28■□□□□ 0.68
SCARB2-213ENST00000638680 SHCBP1Q8NEM2 672 aa19.28■□□□□ 0.68
SCARB2-213ENST00000638680 HIC2Q96JB3 615 aa19.28■□□□□ 0.68
SCARB2-213ENST00000638680 GTF3C4Q9UKN8 822 aa19.28■□□□□ 0.68
SCARB2-213ENST00000638680 PIN4Q9Y237 131 aaKnown RBP19.28■□□□□ 0.68
SCARB2-213ENST00000638680 SETD1BQ9UPS6 1966 aaKnown RBP19.28■□□□□ 0.68
SCARB2-213ENST00000638680 GRB10Q13322 594 aa19.27■□□□□ 0.68
SCARB2-213ENST00000638680 CD274Q9NZQ7 290 aa19.27■□□□□ 0.68
SCARB2-213ENST00000638680 SEPT3Q9UH03 358 aa19.27■□□□□ 0.68
SCARB2-213ENST00000638680 MYCP01106 439 aaPredicted RBP19.27■□□□□ 0.68
SCARB2-213ENST00000638680 CPB1P15086 417 aa19.27■□□□□ 0.68
SCARB2-213ENST00000638680 VPS33BQ9H267 617 aa19.27■□□□□ 0.68
SCARB2-213ENST00000638680 SLC37A4O43826 429 aa19.27■□□□□ 0.68
SCARB2-213ENST00000638680 NDUFS3O75489 264 aa19.27■□□□□ 0.68
SCARB2-213ENST00000638680 MTMR2Q13614 643 aa19.27■□□□□ 0.68
SCARB2-213ENST00000638680 BRINP3Q76B58 766 aa19.27■□□□□ 0.68
SCARB2-213ENST00000638680 OTUB1Q96FW1 271 aaPredicted RBP19.27■□□□□ 0.68
SCARB2-213ENST00000638680 RSPH10B2B2RC85 870 aa19.27■□□□□ 0.68
SCARB2-213ENST00000638680 PSTPIP1O43586 416 aa19.27■□□□□ 0.68
SCARB2-213ENST00000638680 CSF1RP07333 972 aa19.27■□□□□ 0.68
SCARB2-213ENST00000638680 RSPH10BP0C881 870 aa19.27■□□□□ 0.68
SCARB2-213ENST00000638680 AASDHQ4L235 1098 aaPredicted RBP19.27■□□□□ 0.68
SCARB2-213ENST00000638680 STX19Q8N4C7 294 aa19.27■□□□□ 0.68
SCARB2-213ENST00000638680 MRGBPQ9NV56 204 aa19.27■□□□□ 0.68
SCARB2-213ENST00000638680 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.27■□□□□ 0.68
SCARB2-213ENST00000638680 HPSEQ9Y251 543 aa19.27■□□□□ 0.68
SCARB2-213ENST00000638680 ATP6V1G2O95670 118 aa19.27■□□□□ 0.67
SCARB2-213ENST00000638680 NNMTP40261 264 aa19.27■□□□□ 0.67
SCARB2-213ENST00000638680 BAATQ14032 418 aaPredicted RBP19.27■□□□□ 0.67
SCARB2-213ENST00000638680 ZNF669Q96BR6 464 aaPredicted RBP19.27■□□□□ 0.67
SCARB2-213ENST00000638680 LACRTQ9GZZ8 138 aa19.27■□□□□ 0.67
SCARB2-213ENST00000638680 ZNF556Q9HAH1 456 aa19.27■□□□□ 0.67
SCARB2-213ENST00000638680 PRR12Q9ULL5 1215 aa19.27■□□□□ 0.67
SCARB2-213ENST00000638680 FAM32AQ9Y421 112 aaKnown RBP19.27■□□□□ 0.67
SCARB2-213ENST00000638680 FAXCQ5TGI0 409 aa19.26■□□□□ 0.67
SCARB2-213ENST00000638680 APLFQ8IW19 511 aaPredicted RBP19.26■□□□□ 0.67
SCARB2-213ENST00000638680 SCUBE1Q8IWY4 988 aa19.26■□□□□ 0.67
SCARB2-213ENST00000638680 SP8Q8IXZ3 490 aa19.26■□□□□ 0.67
SCARB2-213ENST00000638680 ZNF786Q8N393 782 aa19.26■□□□□ 0.67
SCARB2-213ENST00000638680 FBXO36Q8NEA4 188 aa19.26■□□□□ 0.67
SCARB2-213ENST00000638680 IPMKQ8NFU5 416 aa19.26■□□□□ 0.67
SCARB2-213ENST00000638680 ACTRT1Q8TDG2 376 aa19.26■□□□□ 0.67
SCARB2-213ENST00000638680 PABPC5Q96DU9 382 aaKnown RBP19.26■□□□□ 0.67
SCARB2-213ENST00000638680 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.26■□□□□ 0.67
SCARB2-213ENST00000638680 SERPINB5P36952 375 aa19.26■□□□□ 0.67
SCARB2-213ENST00000638680 SNRPFP62306 86 aaKnown RBP19.26■□□□□ 0.67
SCARB2-213ENST00000638680 TRIM65Q6PJ69 517 aa19.26■□□□□ 0.67
SCARB2-213ENST00000638680 SPATA2LQ8IUW3 424 aaPredicted RBP19.26■□□□□ 0.67
SCARB2-213ENST00000638680 ELMOD1Q8N336 334 aa19.26■□□□□ 0.67
SCARB2-213ENST00000638680 LRRN4CLQ8ND94 238 aa19.26■□□□□ 0.67
SCARB2-213ENST00000638680 C1orf131Q8NDD1 294 aaKnown RBP19.26■□□□□ 0.67
SCARB2-213ENST00000638680 AGPAT3Q9NRZ7 376 aa19.26■□□□□ 0.67
SCARB2-213ENST00000638680 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.26■□□□□ 0.67
SCARB2-213ENST00000638680 DMGDHQ9UI17 866 aaKnown RBP19.26■□□□□ 0.67
SCARB2-213ENST00000638680 O00370 1275 aa19.26■□□□□ 0.67
SCARB2-213ENST00000638680 SUGP1Q8IWZ8 645 aaKnown RBP19.26■□□□□ 0.67
SCARB2-213ENST00000638680 SCN3BQ9NY72 215 aa19.26■□□□□ 0.67
SCARB2-213ENST00000638680 WHRNQ9P202 907 aa19.26■□□□□ 0.67
SCARB2-213ENST00000638680 NYAP2Q9P242 653 aa19.26■□□□□ 0.67
SCARB2-213ENST00000638680 SPHKAPQ2M3C7 1700 aa19.26■□□□□ 0.67
SCARB2-213ENST00000638680 FAM95CA0A1B0GW59 222 aa19.26■□□□□ 0.67
SCARB2-213ENST00000638680 SPDYE5A6NIY4 337 aa19.26■□□□□ 0.67
SCARB2-213ENST00000638680 FOXN3O00409 490 aaPredicted RBP19.26■□□□□ 0.67
SCARB2-213ENST00000638680 KRT75O95678 551 aa19.26■□□□□ 0.67
SCARB2-213ENST00000638680 CLK1P49759 484 aaKnown RBP19.26■□□□□ 0.67
SCARB2-213ENST00000638680 HMGCS2P54868 508 aa19.26■□□□□ 0.67
SCARB2-213ENST00000638680 GOLGA7BQ2TAP0 167 aa19.26■□□□□ 0.67
SCARB2-213ENST00000638680 SPDYE7PQ495Y7 208 aa19.26■□□□□ 0.67
SCARB2-213ENST00000638680 SEPT12Q8IYM1 358 aa19.26■□□□□ 0.67
SCARB2-213ENST00000638680 INO80Q9ULG1 1556 aaPredicted RBP19.26■□□□□ 0.67
SCARB2-213ENST00000638680 C5orf58C9J3I9 102 aa19.26■□□□□ 0.67
SCARB2-213ENST00000638680 RARGP13631 454 aa19.26■□□□□ 0.67
SCARB2-213ENST00000638680 PRKCEQ02156 737 aa19.26■□□□□ 0.67
SCARB2-213ENST00000638680 MEI1Q5TIA1 1274 aa19.26■□□□□ 0.67
SCARB2-213ENST00000638680 CDC42EP4Q9H3Q1 356 aaKnown RBP19.26■□□□□ 0.67
SCARB2-213ENST00000638680 ZNF263O14978 683 aa19.25■□□□□ 0.67
SCARB2-213ENST00000638680 RFX5P48382 616 aaPredicted RBP19.25■□□□□ 0.67
SCARB2-213ENST00000638680 HORMAD1Q86X24 394 aa19.25■□□□□ 0.67
SCARB2-213ENST00000638680 CAVIN3Q969G5 261 aa19.25■□□□□ 0.67
SCARB2-213ENST00000638680 RUSC1Q9BVN2 902 aa19.25■□□□□ 0.67
SCARB2-213ENST00000638680 ATF5Q9Y2D1 282 aaPredicted RBP19.25■□□□□ 0.67
SCARB2-213ENST00000638680 UBOX5O94941 541 aa19.25■□□□□ 0.67
SCARB2-213ENST00000638680 HIST1H2AGP0C0S8 130 aaPredicted RBP19.25■□□□□ 0.67
SCARB2-213ENST00000638680 TXNP10599 105 aaKnown RBP19.25■□□□□ 0.67
SCARB2-213ENST00000638680 HIST1H2ADP20671 130 aa19.25■□□□□ 0.67
SCARB2-213ENST00000638680 SERPINB1P30740 379 aa19.25■□□□□ 0.67
SCARB2-213ENST00000638680 LRRC74AQ0VAA2 488 aa19.25■□□□□ 0.67
SCARB2-213ENST00000638680 MTDHQ86UE4 582 aaKnown RBP19.25■□□□□ 0.67
SCARB2-213ENST00000638680 HIST1H2AHQ96KK5 128 aa19.25■□□□□ 0.67
SCARB2-213ENST00000638680 HIST1H2AJQ99878 128 aa19.25■□□□□ 0.67
SCARB2-213ENST00000638680 H2AFJQ9BTM1 129 aa19.25■□□□□ 0.67
SCARB2-213ENST00000638680 NT5C1AQ9BXI3 368 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms