RNA–Protein interactions for RNA: ENST00000638589.1

HNRNPU-215, Transcript of heterogeneous nuclear ribonucleoprotein U, human

TSL 2

Gene HNRNPU, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPU-215	ENST00000638589	C3orf20	Q8ND61	904 aa		4.22	□□□□□ -1.73
HNRNPU-215	ENST00000638589	SLC30A5	Q8TAD4	765 aa		4.22	□□□□□ -1.73
HNRNPU-215	ENST00000638589	ASB10	Q8WXI3	467 aa		4.22	□□□□□ -1.73
HNRNPU-215	ENST00000638589	LARP4B	Q92615	738 aa	Known RBP	4.22	□□□□□ -1.73
HNRNPU-215	ENST00000638589	FAM89A	Q96GI7	184 aa		4.22	□□□□□ -1.73
HNRNPU-215	ENST00000638589	MOCS1	Q9NZB8	636 aa		4.22	□□□□□ -1.73
HNRNPU-215	ENST00000638589	CFDP1	Q9UEE9	299 aa	Predicted RBP	4.22	□□□□□ -1.73
HNRNPU-215	ENST00000638589	CORO2B	Q9UQ03	480 aa		4.22	□□□□□ -1.73
HNRNPU-215	ENST00000638589	KIDINS220	Q9ULH0	1771 aa		4.22	□□□□□ -1.73
HNRNPU-215	ENST00000638589	EIF2AK4	Q9P2K8	1649 aa	Known RBP	4.22	□□□□□ -1.73
HNRNPU-215	ENST00000638589	FRMPD1	Q5SYB0	1578 aa		4.22	□□□□□ -1.73
HNRNPU-215	ENST00000638589	NEO1	Q92859	1461 aa		4.22	□□□□□ -1.73
HNRNPU-215	ENST00000638589	DHX57	Q6P158	1386 aa	Known RBP	4.22	□□□□□ -1.73
HNRNPU-215	ENST00000638589	ZNF644	Q9H582	1327 aa	Predicted RBP	4.22	□□□□□ -1.73
HNRNPU-215	ENST00000638589	KRTAP23-1	A1A580	65 aa		4.22	□□□□□ -1.73
HNRNPU-215	ENST00000638589	MGST3	O14880	152 aa		4.22	□□□□□ -1.73
HNRNPU-215	ENST00000638589	TBX3	O15119	743 aa		4.22	□□□□□ -1.73
HNRNPU-215	ENST00000638589	GNAL	P38405	381 aa		4.22	□□□□□ -1.73
HNRNPU-215	ENST00000638589	SCAP	Q12770	1279 aa		4.22	□□□□□ -1.73
HNRNPU-215	ENST00000638589	CTBP1	Q13363	440 aa		4.22	□□□□□ -1.73
HNRNPU-215	ENST00000638589	UBE4A	Q14139	1066 aa		4.22	□□□□□ -1.73
HNRNPU-215	ENST00000638589	KIAA0753	Q2KHM9	967 aa		4.22	□□□□□ -1.73
HNRNPU-215	ENST00000638589	WDR78	Q5VTH9	848 aa		4.22	□□□□□ -1.73
HNRNPU-215	ENST00000638589	MFSD5	Q6N075	450 aa		4.22	□□□□□ -1.73
HNRNPU-215	ENST00000638589	PDZD4	Q76G19	769 aa	Predicted RBP	4.22	□□□□□ -1.73
HNRNPU-215	ENST00000638589	DAAM2	Q86T65	1068 aa		4.22	□□□□□ -1.73
HNRNPU-215	ENST00000638589	CFAP52	Q8N1V2	620 aa		4.22	□□□□□ -1.73
HNRNPU-215	ENST00000638589	MPP5	Q8N3R9	675 aa		4.22	□□□□□ -1.73
HNRNPU-215	ENST00000638589		Q8NA96	180 aa		4.22	□□□□□ -1.73
HNRNPU-215	ENST00000638589	FAM46D	Q8NEK8	389 aa		4.22	□□□□□ -1.73
HNRNPU-215	ENST00000638589	FAM193B	Q96PV7	902 aa	Predicted RBP	4.22	□□□□□ -1.73
HNRNPU-215	ENST00000638589	MPHOSPH9	Q99550	1183 aa		4.22	□□□□□ -1.73
HNRNPU-215	ENST00000638589	TMX1	Q9H3N1	280 aa		4.22	□□□□□ -1.73
HNRNPU-215	ENST00000638589	MANSC1	Q9H8J5	431 aa		4.22	□□□□□ -1.73
HNRNPU-215	ENST00000638589	STXBP5L	Q9Y2K9	1186 aa		4.22	□□□□□ -1.73
HNRNPU-215	ENST00000638589	COMMD10	Q9Y6G5	202 aa		4.22	□□□□□ -1.73
HNRNPU-215	ENST00000638589	MAGI2	Q86UL8	1455 aa		4.22	□□□□□ -1.73
HNRNPU-215	ENST00000638589	NCOA1	Q15788	1441 aa		4.21	□□□□□ -1.73
HNRNPU-215	ENST00000638589	HECW2	Q9P2P5	1572 aa		4.21	□□□□□ -1.74
HNRNPU-215	ENST00000638589	KPNA5	O15131	536 aa		4.21	□□□□□ -1.74
HNRNPU-215	ENST00000638589	SUN1	O94901	812 aa		4.21	□□□□□ -1.74
HNRNPU-215	ENST00000638589	UNC5C	O95185	931 aa		4.21	□□□□□ -1.74
HNRNPU-215	ENST00000638589	GPANK1	O95872	356 aa		4.21	□□□□□ -1.74
HNRNPU-215	ENST00000638589	SMARCA1	P28370	1054 aa		4.21	□□□□□ -1.74
HNRNPU-215	ENST00000638589	PTH1R	Q03431	593 aa		4.21	□□□□□ -1.74
HNRNPU-215	ENST00000638589	TUBA3C	Q13748	450 aa		4.21	□□□□□ -1.74
HNRNPU-215	ENST00000638589	CNN3	Q15417	329 aa	Known RBP	4.21	□□□□□ -1.74
HNRNPU-215	ENST00000638589	ZXDC	Q2QGD7	858 aa	Predicted RBP	4.21	□□□□□ -1.74
HNRNPU-215	ENST00000638589	BEAN1	Q3B7T3	259 aa		4.21	□□□□□ -1.74
HNRNPU-215	ENST00000638589	CYB5RL	Q6IPT4	315 aa		4.21	□□□□□ -1.74
HNRNPU-215	ENST00000638589	TUBA3E	Q6PEY2	450 aa		4.21	□□□□□ -1.74
HNRNPU-215	ENST00000638589	APOA5	Q6Q788	366 aa		4.21	□□□□□ -1.74
HNRNPU-215	ENST00000638589		Q6ZPA2	131 aa		4.21	□□□□□ -1.74
HNRNPU-215	ENST00000638589	SEM1	Q6ZVN7	128 aa		4.21	□□□□□ -1.74
HNRNPU-215	ENST00000638589	GET4	Q7L5D6	327 aa	Predicted RBP	4.21	□□□□□ -1.74
HNRNPU-215	ENST00000638589	CREBRF	Q8IUR6	639 aa		4.21	□□□□□ -1.74
HNRNPU-215	ENST00000638589	SLC15A4	Q8N697	577 aa		4.21	□□□□□ -1.74
HNRNPU-215	ENST00000638589	ZFP28	Q8NHY6	868 aa		4.21	□□□□□ -1.74
HNRNPU-215	ENST00000638589	SLC25A43	Q8WUT9	341 aa	Predicted RBP	4.21	□□□□□ -1.74
HNRNPU-215	ENST00000638589	BORCS6	Q96GS4	357 aa		4.21	□□□□□ -1.74
HNRNPU-215	ENST00000638589	VPS11	Q9H270	941 aa		4.21	□□□□□ -1.74
HNRNPU-215	ENST00000638589	PNPO	Q9NVS9	261 aa		4.21	□□□□□ -1.74
HNRNPU-215	ENST00000638589	SPEF1	Q9Y4P9	236 aa		4.21	□□□□□ -1.74
HNRNPU-215	ENST00000638589	ATP7A	Q04656	1500 aa		4.21	□□□□□ -1.74
HNRNPU-215	ENST00000638589	IQGAP3	Q86VI3	1631 aa		4.21	□□□□□ -1.74
HNRNPU-215	ENST00000638589	ZMYM4	Q5VZL5	1548 aa		4.21	□□□□□ -1.74
HNRNPU-215	ENST00000638589	DUOX2	Q9NRD8	1548 aa		4.21	□□□□□ -1.74
HNRNPU-215	ENST00000638589	PMS2P1	A4D2B8	440 aa		4.21	□□□□□ -1.74
HNRNPU-215	ENST00000638589	HAUS5	O94927	633 aa		4.21	□□□□□ -1.74
HNRNPU-215	ENST00000638589	LMNA	P02545	664 aa	Known RBP	4.21	□□□□□ -1.74
HNRNPU-215	ENST00000638589	ITGAM	P11215	1152 aa		4.21	□□□□□ -1.74
HNRNPU-215	ENST00000638589	PIK3CG	P48736	1102 aa		4.21	□□□□□ -1.74
HNRNPU-215	ENST00000638589	PABPC1L	Q4VXU2	614 aa	Known RBP	4.21	□□□□□ -1.74
HNRNPU-215	ENST00000638589	RRAGB	Q5VZM2	374 aa		4.21	□□□□□ -1.74
HNRNPU-215	ENST00000638589	IL31	Q6EBC2	164 aa		4.21	□□□□□ -1.74
HNRNPU-215	ENST00000638589	ZNF365	Q70YC5	407 aa		4.21	□□□□□ -1.74
HNRNPU-215	ENST00000638589	ANKRD35	Q8N283	1001 aa		4.21	□□□□□ -1.74
HNRNPU-215	ENST00000638589	RNF31	Q96EP0	1072 aa		4.21	□□□□□ -1.74
HNRNPU-215	ENST00000638589	MRGPRX1	Q96LB2	322 aa		4.21	□□□□□ -1.74
HNRNPU-215	ENST00000638589	ALOXE3	Q9BYJ1	711 aa		4.21	□□□□□ -1.74
HNRNPU-215	ENST00000638589	CTTNBP2NL	Q9P2B4	639 aa		4.21	□□□□□ -1.74
HNRNPU-215	ENST00000638589	RAPGEFL1	Q9UHV5	662 aa		4.21	□□□□□ -1.74
HNRNPU-215	ENST00000638589	PNMA8B	Q9ULN7	279 aa	Predicted RBP	4.21	□□□□□ -1.74
HNRNPU-215	ENST00000638589	DENND4B	O75064	1496 aa	Predicted RBP	4.21	□□□□□ -1.74
HNRNPU-215	ENST00000638589	ADGRL1	O94910	1474 aa		4.21	□□□□□ -1.74
HNRNPU-215	ENST00000638589	TSPOAP1	O95153	1857 aa		4.2	□□□□□ -1.74
HNRNPU-215	ENST00000638589	ABCA6	Q8N139	1617 aa		4.2	□□□□□ -1.74
HNRNPU-215	ENST00000638589	RNF17	Q9BXT8	1623 aa	Known RBP	4.2	□□□□□ -1.74
HNRNPU-215	ENST00000638589	TOR1B	O14657	336 aa		4.2	□□□□□ -1.74
HNRNPU-215	ENST00000638589	DCLK1	O15075	740 aa		4.2	□□□□□ -1.74
HNRNPU-215	ENST00000638589	ERN1	O75460	977 aa	Known RBP	4.2	□□□□□ -1.74
HNRNPU-215	ENST00000638589	FAM163B	P0C2L3	166 aa		4.2	□□□□□ -1.74
HNRNPU-215	ENST00000638589	UCP3	P55916	312 aa		4.2	□□□□□ -1.74
HNRNPU-215	ENST00000638589	FOXE3	Q13461	319 aa		4.2	□□□□□ -1.74
HNRNPU-215	ENST00000638589	ZIK1	Q3SY52	487 aa	Predicted RBP	4.2	□□□□□ -1.74
HNRNPU-215	ENST00000638589	SPATS1	Q496A3	300 aa		4.2	□□□□□ -1.74
HNRNPU-215	ENST00000638589	MINDY4	Q4G0A6	757 aa		4.2	□□□□□ -1.74
HNRNPU-215	ENST00000638589	HS1BP3	Q53T59	392 aa		4.2	□□□□□ -1.74
HNRNPU-215	ENST00000638589	KSR2	Q6VAB6	950 aa		4.2	□□□□□ -1.74
HNRNPU-215	ENST00000638589	HTR3D	Q70Z44	454 aa		4.2	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms