RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 PKMYT1Q99640 499 aa23.35■■□□□ 1.33
SCN1B-206ENST00000638536 CEP72Q9P209 647 aa23.35■■□□□ 1.33
SCN1B-206ENST00000638536 ATICP31939 592 aa23.34■■□□□ 1.33
SCN1B-206ENST00000638536 CDH8P55286 799 aa23.34■■□□□ 1.33
SCN1B-206ENST00000638536 TWF1Q12792 350 aa23.34■■□□□ 1.33
SCN1B-206ENST00000638536 ZNF699Q32M78 642 aa23.34■■□□□ 1.33
SCN1B-206ENST00000638536 RNF135Q8IUD6 432 aa23.34■■□□□ 1.33
SCN1B-206ENST00000638536 SYAP1Q96A49 352 aaPredicted RBP23.34■■□□□ 1.33
SCN1B-206ENST00000638536 LPIN3Q9BQK8 851 aa23.34■■□□□ 1.33
SCN1B-206ENST00000638536 ACBD6Q9BR61 282 aa23.34■■□□□ 1.33
SCN1B-206ENST00000638536 SDCBP2Q9H190 292 aa23.34■■□□□ 1.33
SCN1B-206ENST00000638536 SMYD3Q9H7B4 428 aa23.34■■□□□ 1.33
SCN1B-206ENST00000638536 VRTNQ9H8Y1 702 aa23.34■■□□□ 1.33
SCN1B-206ENST00000638536 GTF3C4Q9UKN8 822 aa23.34■■□□□ 1.33
SCN1B-206ENST00000638536 YIPF1Q9Y548 306 aa23.34■■□□□ 1.33
SCN1B-206ENST00000638536 SLC16A3O15427 465 aaKnown RBP23.33■■□□□ 1.33
SCN1B-206ENST00000638536 LRG1P02750 347 aa23.33■■□□□ 1.33
SCN1B-206ENST00000638536 PDGFRBP09619 1106 aa23.33■■□□□ 1.33
SCN1B-206ENST00000638536 PPP1R2P41236 205 aa23.33■■□□□ 1.33
SCN1B-206ENST00000638536 RAP1GAPP47736 663 aa23.33■■□□□ 1.33
SCN1B-206ENST00000638536 PAK1Q13153 545 aa23.33■■□□□ 1.33
SCN1B-206ENST00000638536 POTEHQ6S545 545 aa23.33■■□□□ 1.33
SCN1B-206ENST00000638536 MYADMQ96S97 322 aa23.33■■□□□ 1.33
SCN1B-206ENST00000638536 PTPRDP23468 1912 aa23.33■■□□□ 1.33
SCN1B-206ENST00000638536 MYBPHLA2RUH7 354 aa23.33■■□□□ 1.32
SCN1B-206ENST00000638536 WARSP23381 471 aaKnown RBP23.33■■□□□ 1.32
SCN1B-206ENST00000638536 LHX1P48742 406 aa23.33■■□□□ 1.32
SCN1B-206ENST00000638536 PSMC1P62191 440 aaKnown RBP23.33■■□□□ 1.32
SCN1B-206ENST00000638536 ENPEPQ07075 957 aa23.33■■□□□ 1.32
SCN1B-206ENST00000638536 INTS6LQ5JSJ4 861 aaKnown RBP23.33■■□□□ 1.32
SCN1B-206ENST00000638536 SCARA5Q6ZMJ2 495 aa23.33■■□□□ 1.32
SCN1B-206ENST00000638536 RTL10Q7L3V2 364 aa23.33■■□□□ 1.32
SCN1B-206ENST00000638536 ITFG1Q8TB96 612 aa23.33■■□□□ 1.32
SCN1B-206ENST00000638536 SEMA4DQ92854 862 aa23.33■■□□□ 1.32
SCN1B-206ENST00000638536 DNAJC25Q9H1X3 360 aa23.33■■□□□ 1.32
SCN1B-206ENST00000638536 XYLBO75191 536 aa23.32■■□□□ 1.32
SCN1B-206ENST00000638536 ASS1P00966 412 aaKnown RBP23.32■■□□□ 1.32
SCN1B-206ENST00000638536 PIK3CAP42336 1068 aa23.32■■□□□ 1.32
SCN1B-206ENST00000638536 TNNC1P63316 161 aa23.32■■□□□ 1.32
SCN1B-206ENST00000638536 MYL7Q01449 175 aa23.32■■□□□ 1.32
SCN1B-206ENST00000638536 SLC5A9Q2M3M2 681 aa23.32■■□□□ 1.32
SCN1B-206ENST00000638536 DPCR1Q3MIW9 517 aa23.32■■□□□ 1.32
SCN1B-206ENST00000638536 CBWD6Q4V339 395 aa23.32■■□□□ 1.32
SCN1B-206ENST00000638536 DCAF17Q5H9S7 520 aaPredicted RBP23.32■■□□□ 1.32
SCN1B-206ENST00000638536 CBWD3Q5JTY5 395 aa23.32■■□□□ 1.32
SCN1B-206ENST00000638536 CBWD5Q5RIA9 395 aa23.32■■□□□ 1.32
SCN1B-206ENST00000638536 FILIP1Q7Z7B0 1213 aa23.32■■□□□ 1.32
SCN1B-206ENST00000638536 HS6ST3Q8IZP7 471 aa23.32■■□□□ 1.32
SCN1B-206ENST00000638536 ST13P5Q8NFI4 369 aaPredicted RBP23.32■■□□□ 1.32
SCN1B-206ENST00000638536 APOBEC3GQ9HC16 384 aaKnown RBP23.32■■□□□ 1.32
SCN1B-206ENST00000638536 TMEM8AQ9HCN3 771 aa23.32■■□□□ 1.32
SCN1B-206ENST00000638536 CRTAC1Q9NQ79 661 aa23.32■■□□□ 1.32
SCN1B-206ENST00000638536 ABI2Q9NYB9 513 aaPredicted RBP23.32■■□□□ 1.32
SCN1B-206ENST00000638536 GOLGA6L22H0YM25 854 aa23.31■■□□□ 1.32
SCN1B-206ENST00000638536 TACC1O75410 805 aa23.31■■□□□ 1.32
SCN1B-206ENST00000638536 POU2F2P09086 479 aa23.31■■□□□ 1.32
SCN1B-206ENST00000638536 TSPY1Q01534 308 aa23.31■■□□□ 1.32
SCN1B-206ENST00000638536 SGSM1Q2NKQ1 1148 aa23.31■■□□□ 1.32
SCN1B-206ENST00000638536 ZNF667Q5HYK9 610 aa23.31■■□□□ 1.32
SCN1B-206ENST00000638536 TCERG1LQ5VWI1 586 aa23.31■■□□□ 1.32
SCN1B-206ENST00000638536 GET4Q7L5D6 327 aaPredicted RBP23.31■■□□□ 1.32
SCN1B-206ENST00000638536 SPATA18Q8TC71 538 aa23.31■■□□□ 1.32
SCN1B-206ENST00000638536 SLC35C1Q96A29 364 aa23.31■■□□□ 1.32
SCN1B-206ENST00000638536 CEP63Q96MT8 703 aa23.31■■□□□ 1.32
SCN1B-206ENST00000638536 SRRTQ9BXP5 876 aaKnown RBP23.31■■□□□ 1.32
SCN1B-206ENST00000638536 DPEP3Q9H4B8 488 aa23.31■■□□□ 1.32
SCN1B-206ENST00000638536 ARMCX3Q9UH62 379 aaPredicted RBP23.31■■□□□ 1.32
SCN1B-206ENST00000638536 MUTYHQ9UIF7 546 aa23.31■■□□□ 1.32
SCN1B-206ENST00000638536 MAFFQ9ULX9 164 aa23.31■■□□□ 1.32
SCN1B-206ENST00000638536 USTQ9Y2C2 406 aa23.31■■□□□ 1.32
SCN1B-206ENST00000638536 NR2E1Q9Y466 385 aa23.31■■□□□ 1.32
SCN1B-206ENST00000638536 BICDL2A1A5D9 508 aa23.3■■□□□ 1.32
SCN1B-206ENST00000638536 CLSTN1O94985 981 aa23.3■■□□□ 1.32
SCN1B-206ENST00000638536 RHOP08100 348 aa23.3■■□□□ 1.32
SCN1B-206ENST00000638536 ATF6P18850 670 aa23.3■■□□□ 1.32
SCN1B-206ENST00000638536 GNL1P36915 607 aaPredicted RBP23.3■■□□□ 1.32
SCN1B-206ENST00000638536 CCR2P41597 374 aa23.3■■□□□ 1.32
SCN1B-206ENST00000638536 FAM171BQ6P995 826 aa23.3■■□□□ 1.32
SCN1B-206ENST00000638536 FOXR2Q6PJQ5 311 aa23.3■■□□□ 1.32
SCN1B-206ENST00000638536 DCP1BQ8IZD4 617 aaKnown RBP23.3■■□□□ 1.32
SCN1B-206ENST00000638536 TDRD5Q8NAT2 981 aaKnown RBP23.3■■□□□ 1.32
SCN1B-206ENST00000638536 OR6B3Q8NGW1 331 aa23.3■■□□□ 1.32
SCN1B-206ENST00000638536 SEPT5Q99719 369 aaPredicted RBP23.3■■□□□ 1.32
SCN1B-206ENST00000638536 CORO1BQ9BR76 489 aa23.3■■□□□ 1.32
SCN1B-206ENST00000638536 EPHX3Q9H6B9 360 aa23.3■■□□□ 1.32
SCN1B-206ENST00000638536 LIMD1Q9UGP4 676 aa23.3■■□□□ 1.32
SCN1B-206ENST00000638536 ASGR2P07307 311 aa23.3■■□□□ 1.32
SCN1B-206ENST00000638536 FSHRP23945 695 aa23.3■■□□□ 1.32
SCN1B-206ENST00000638536 GTF2H1P32780 548 aa23.3■■□□□ 1.32
SCN1B-206ENST00000638536 ASPAP45381 313 aa23.3■■□□□ 1.32
SCN1B-206ENST00000638536 GPR15P49685 360 aa23.3■■□□□ 1.32
SCN1B-206ENST00000638536 PABPC1LQ4VXU2 614 aaKnown RBP23.3■■□□□ 1.32
SCN1B-206ENST00000638536 KRT39Q6A163 491 aa23.3■■□□□ 1.32
SCN1B-206ENST00000638536 STKLD1Q8NE28 680 aa23.3■■□□□ 1.32
SCN1B-206ENST00000638536 GPR152Q8TDT2 470 aa23.3■■□□□ 1.32
SCN1B-206ENST00000638536 TCEAL4Q96EI5 215 aa23.3■■□□□ 1.32
SCN1B-206ENST00000638536 SYT15Q9BQS2 421 aa23.3■■□□□ 1.32
SCN1B-206ENST00000638536 PTPN2P17706 415 aa23.29■■□□□ 1.32
SCN1B-206ENST00000638536 GBP2P32456 591 aaPredicted RBP23.29■■□□□ 1.32
SCN1B-206ENST00000638536 MXI1P50539 228 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms