RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 EPHB6O15197 1021 aa15.03■□□□□ -0
SCARB2-208ENST00000638372 SNX2O60749 519 aa15.03■□□□□ -0
SCARB2-208ENST00000638372 FUT2Q10981 343 aa15.03■□□□□ -0
SCARB2-208ENST00000638372 MORF4L2Q15014 288 aa15.03■□□□□ -0
SCARB2-208ENST00000638372 ACCSLQ4AC99 568 aa15.03■□□□□ -0
SCARB2-208ENST00000638372 BOLA3Q53S33 107 aa15.03■□□□□ -0
SCARB2-208ENST00000638372 KRT80Q6KB66 452 aa15.03■□□□□ -0
SCARB2-208ENST00000638372 FAM117BQ6P1L5 589 aa15.03■□□□□ -0
SCARB2-208ENST00000638372 ZBTB45Q96K62 511 aaPredicted RBP15.03■□□□□ -0
SCARB2-208ENST00000638372 CGRRF1Q99675 332 aa15.03■□□□□ -0
SCARB2-208ENST00000638372 UPF3AQ9H1J1 476 aaKnown RBP15.03■□□□□ -0
SCARB2-208ENST00000638372 CACYBPQ9HB71 228 aaKnown RBP15.03■□□□□ -0
SCARB2-208ENST00000638372 USP15Q9Y4E8 981 aaPredicted RBP15.03■□□□□ -0
SCARB2-208ENST00000638372 SMIM24O75264 130 aa15.02■□□□□ -0
SCARB2-208ENST00000638372 PCSK1P29120 753 aa15.02■□□□□ -0
SCARB2-208ENST00000638372 TAF6P49848 677 aa15.02■□□□□ -0
SCARB2-208ENST00000638372 RNF219Q5W0B1 726 aaPredicted RBP15.02■□□□□ -0
SCARB2-208ENST00000638372 FBXW10Q5XX13 1052 aa15.02■□□□□ -0
SCARB2-208ENST00000638372 EPS8L3Q8TE67 593 aaKnown RBP15.02■□□□□ -0
SCARB2-208ENST00000638372 SGSM3Q96HU1 749 aa15.02■□□□□ -0
SCARB2-208ENST00000638372 SEC16BQ96JE7 1060 aa15.02■□□□□ -0
SCARB2-208ENST00000638372 PURBQ96QR8 312 aaKnown RBP15.02■□□□□ -0
SCARB2-208ENST00000638372 A1CFQ9NQ94 594 aaKnown RBP15.02■□□□□ -0
SCARB2-208ENST00000638372 GPATCH2LQ9NWQ4 482 aa15.02■□□□□ -0
SCARB2-208ENST00000638372 H3BQF6 201 aa15.02□□□□□ -0.01
SCARB2-208ENST00000638372 SV2CQ496J9 727 aa15.02□□□□□ -0.01
SCARB2-208ENST00000638372 COBLL1Q53SF7 1204 aa15.02□□□□□ -0.01
SCARB2-208ENST00000638372 LCA5Q86VQ0 697 aa15.02□□□□□ -0.01
SCARB2-208ENST00000638372 FAM8A1Q9UBU6 413 aa15.02□□□□□ -0.01
SCARB2-208ENST00000638372 E5RI56 91 aa15.02□□□□□ -0.01
SCARB2-208ENST00000638372 H3BRB1 525 aa15.02□□□□□ -0.01
SCARB2-208ENST00000638372 CTCFP49711 727 aaPredicted RBP15.02□□□□□ -0.01
SCARB2-208ENST00000638372 GLB1LQ6UWU2 654 aa15.02□□□□□ -0.01
SCARB2-208ENST00000638372 ACTRT1Q8TDG2 376 aa15.02□□□□□ -0.01
SCARB2-208ENST00000638372 KAT5Q92993 513 aa15.02□□□□□ -0.01
SCARB2-208ENST00000638372 MKL1Q969V6 931 aa15.02□□□□□ -0.01
SCARB2-208ENST00000638372 P2RX7Q99572 595 aaKnown RBP15.02□□□□□ -0.01
SCARB2-208ENST00000638372 TSSK1BQ9BXA7 367 aa15.02□□□□□ -0.01
SCARB2-208ENST00000638372 TUT1Q9H6E5 874 aaKnown RBP15.02□□□□□ -0.01
SCARB2-208ENST00000638372 SCOCQ9UIL1 159 aa15.02□□□□□ -0.01
SCARB2-208ENST00000638372 GSTA4O15217 222 aa15.01□□□□□ -0.01
SCARB2-208ENST00000638372 ZC3H11AO75152 810 aaKnown RBP eCLIP15.01□□□□□ -0.01
SCARB2-208ENST00000638372 EPHB2P29323 1055 aa15.01□□□□□ -0.01
SCARB2-208ENST00000638372 LAMTOR4Q0VGL1 99 aa15.01□□□□□ -0.01
SCARB2-208ENST00000638372 PCSK7Q16549 785 aa15.01□□□□□ -0.01
SCARB2-208ENST00000638372 SHROOM1Q2M3G4 852 aaPredicted RBP15.01□□□□□ -0.01
SCARB2-208ENST00000638372 NOP9Q86U38 636 aaKnown RBP15.01□□□□□ -0.01
SCARB2-208ENST00000638372 SPDYE1Q8NFV5 336 aaPredicted RBP15.01□□□□□ -0.01
SCARB2-208ENST00000638372 ACP6Q9NPH0 428 aa15.01□□□□□ -0.01
SCARB2-208ENST00000638372 UBQLN1Q9UMX0 589 aaKnown RBP15.01□□□□□ -0.01
SCARB2-208ENST00000638372 FRMPD4Q14CM0 1322 aa15.01□□□□□ -0.01
SCARB2-208ENST00000638372 INSRRP14616 1297 aa15.01□□□□□ -0.01
SCARB2-208ENST00000638372 DNAJC3Q13217 504 aa15.01□□□□□ -0.01
SCARB2-208ENST00000638372 MYBPC2Q14324 1141 aa15.01□□□□□ -0.01
SCARB2-208ENST00000638372 ERP27Q96DN0 273 aa15.01□□□□□ -0.01
SCARB2-208ENST00000638372 ASIC4Q96FT7 647 aa15.01□□□□□ -0.01
SCARB2-208ENST00000638372 ROPN1BQ9BZX4 212 aaPredicted RBP15.01□□□□□ -0.01
SCARB2-208ENST00000638372 ROPN1Q9HAT0 212 aaPredicted RBP15.01□□□□□ -0.01
SCARB2-208ENST00000638372 OR1G1P47890 313 aa15.01□□□□□ -0.01
SCARB2-208ENST00000638372 ANKRD20A4Q4UJ75 823 aa15.01□□□□□ -0.01
SCARB2-208ENST00000638372 ANKRD20A8PQ5CZ79 823 aa15.01□□□□□ -0.01
SCARB2-208ENST00000638372 ANKRD20A2Q5SQ80 823 aa15.01□□□□□ -0.01
SCARB2-208ENST00000638372 MROH9Q5TGP6 573 aa15.01□□□□□ -0.01
SCARB2-208ENST00000638372 ANKRD20A1Q5TYW2 823 aa15.01□□□□□ -0.01
SCARB2-208ENST00000638372 C15orf52Q6ZUT6 534 aaKnown RBP15.01□□□□□ -0.01
SCARB2-208ENST00000638372 DNAJC19Q96DA6 116 aa15.01□□□□□ -0.01
SCARB2-208ENST00000638372 FOXP3Q9BZS1 431 aa15.01□□□□□ -0.01
SCARB2-208ENST00000638372 KCNMB3Q9NPA1 279 aa15.01□□□□□ -0.01
SCARB2-208ENST00000638372 DDIT4Q9NX09 232 aa15.01□□□□□ -0.01
SCARB2-208ENST00000638372 HACD3Q9P035 362 aa15.01□□□□□ -0.01
SCARB2-208ENST00000638372 FAM200BP0CF97 657 aa15.01□□□□□ -0.01
SCARB2-208ENST00000638372 YY1P25490 414 aa15.01□□□□□ -0.01
SCARB2-208ENST00000638372 EFHC1Q5JVL4 640 aa15.01□□□□□ -0.01
SCARB2-208ENST00000638372 NDUFAF2Q8N183 169 aa15.01□□□□□ -0.01
SCARB2-208ENST00000638372 ATPAF2Q8N5M1 289 aa15.01□□□□□ -0.01
SCARB2-208ENST00000638372 OSMRQ99650 979 aa15.01□□□□□ -0.01
SCARB2-208ENST00000638372 TMEM121Q9BTD3 319 aa15.01□□□□□ -0.01
SCARB2-208ENST00000638372 TRIM62Q9BVG3 475 aa15.01□□□□□ -0.01
SCARB2-208ENST00000638372 WWP1Q9H0M0 922 aa15.01□□□□□ -0.01
SCARB2-208ENST00000638372 MROH8Q9H579 483 aa15.01□□□□□ -0.01
SCARB2-208ENST00000638372 ZFYVE28Q9HCC9 887 aa15.01□□□□□ -0.01
SCARB2-208ENST00000638372 SLC38A7Q9NVC3 462 aa15.01□□□□□ -0.01
SCARB2-208ENST00000638372 ADA2Q9NZK5 511 aa15.01□□□□□ -0.01
SCARB2-208ENST00000638372 LMCD1Q9NZU5 365 aa15.01□□□□□ -0.01
SCARB2-208ENST00000638372 SIK3Q9Y2K2 1263 aa15.01□□□□□ -0.01
SCARB2-208ENST00000638372 TTC36A6NLP5 189 aa15□□□□□ -0.01
SCARB2-208ENST00000638372 ZNF286BP0CG31 522 aa15□□□□□ -0.01
SCARB2-208ENST00000638372 ACADSBP45954 432 aa15□□□□□ -0.01
SCARB2-208ENST00000638372 ALDH18A1P54886 795 aaKnown RBP15□□□□□ -0.01
SCARB2-208ENST00000638372 MEA1Q16626 185 aa15□□□□□ -0.01
SCARB2-208ENST00000638372 LVRNQ6Q4G3 990 aa15□□□□□ -0.01
SCARB2-208ENST00000638372 TAS2R42Q7RTR8 314 aa15□□□□□ -0.01
SCARB2-208ENST00000638372 SAMD3Q8N6K7 520 aa15□□□□□ -0.01
SCARB2-208ENST00000638372 MYCBPQ99417 103 aaPredicted RBP15□□□□□ -0.01
SCARB2-208ENST00000638372 STOML1Q9UBI4 398 aa15□□□□□ -0.01
SCARB2-208ENST00000638372 M0QYT0 321 aa15□□□□□ -0.01
SCARB2-208ENST00000638372 PROSCO94903 275 aa15□□□□□ -0.01
SCARB2-208ENST00000638372 NUMBP49757 651 aa15□□□□□ -0.01
SCARB2-208ENST00000638372 OTUD4Q01804 1114 aaKnown RBP15□□□□□ -0.01
SCARB2-208ENST00000638372 PPIL6Q8IXY8 311 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms