RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 TMEM86AQ8N2M4 240 aa18.01■□□□□ 0.47
CACNA1A-259ENST00000638114 KIAA0895Q8NCT3 520 aa18.01■□□□□ 0.47
CACNA1A-259ENST00000638114 GOLGA5Q8TBA6 731 aa18.01■□□□□ 0.47
CACNA1A-259ENST00000638114 SHKBP1Q8TBC3 707 aa18.01■□□□□ 0.47
CACNA1A-259ENST00000638114 SPPL2BQ8TCT7 592 aa18.01■□□□□ 0.47
CACNA1A-259ENST00000638114 C2orf15Q8WU43 125 aaKnown RBP18.01■□□□□ 0.47
CACNA1A-259ENST00000638114 CCDC127Q96BQ5 260 aa18.01■□□□□ 0.47
CACNA1A-259ENST00000638114 HPDLQ96IR7 371 aa18.01■□□□□ 0.47
CACNA1A-259ENST00000638114 CGRRF1Q99675 332 aa18.01■□□□□ 0.47
CACNA1A-259ENST00000638114 PLA2G2FQ9BZM2 168 aa18.01■□□□□ 0.47
CACNA1A-259ENST00000638114 ZFP14Q9HCL3 533 aa18.01■□□□□ 0.47
CACNA1A-259ENST00000638114 DDX43Q9NXZ2 648 aaKnown RBP18.01■□□□□ 0.47
CACNA1A-259ENST00000638114 FAM237AA0A1B0GTK4 181 aa18■□□□□ 0.47
CACNA1A-259ENST00000638114 A0A1W2PQ27 194 aa18■□□□□ 0.47
CACNA1A-259ENST00000638114 A0A1W2PQ64 194 aa18■□□□□ 0.47
CACNA1A-259ENST00000638114 A0A1W2PQD8 194 aa18■□□□□ 0.47
CACNA1A-259ENST00000638114 A0A1W2PRU2 124 aa18■□□□□ 0.47
CACNA1A-259ENST00000638114 EXOC3O60645 756 aa18■□□□□ 0.47
CACNA1A-259ENST00000638114 RPN1P04843 607 aaKnown RBP18■□□□□ 0.47
CACNA1A-259ENST00000638114 FCARP24071 287 aa18■□□□□ 0.47
CACNA1A-259ENST00000638114 MYL7Q01449 175 aa18■□□□□ 0.47
CACNA1A-259ENST00000638114 PFKPQ01813 784 aa18■□□□□ 0.47
CACNA1A-259ENST00000638114 TRAPPC11Q7Z392 1133 aa18■□□□□ 0.47
CACNA1A-259ENST00000638114 DNAJB7Q7Z6W7 309 aaPredicted RBP18■□□□□ 0.47
CACNA1A-259ENST00000638114 TOP6BLQ8N6T0 577 aa18■□□□□ 0.47
CACNA1A-259ENST00000638114 PSMG2Q969U7 264 aa18■□□□□ 0.47
CACNA1A-259ENST00000638114 ELSPBP1Q96BH3 223 aa18■□□□□ 0.47
CACNA1A-259ENST00000638114 ZSWIM3Q96MP5 696 aa18■□□□□ 0.47
CACNA1A-259ENST00000638114 ASB16Q96NS5 453 aa18■□□□□ 0.47
CACNA1A-259ENST00000638114 LPIN3Q9BQK8 851 aa18■□□□□ 0.47
CACNA1A-259ENST00000638114 LRRC3Q9BY71 257 aa18■□□□□ 0.47
CACNA1A-259ENST00000638114 GOLPH3LQ9H4A5 285 aa18■□□□□ 0.47
CACNA1A-259ENST00000638114 PCDHB5Q9Y5E4 795 aa18■□□□□ 0.47
CACNA1A-259ENST00000638114 CACNA1HO95180 2353 aa17.99■□□□□ 0.47
CACNA1A-259ENST00000638114 PRPF40AO75400 957 aaKnown RBP17.99■□□□□ 0.47
CACNA1A-259ENST00000638114 PRR29P0C7W0 189 aa17.99■□□□□ 0.47
CACNA1A-259ENST00000638114 HAPLN1P10915 354 aaPredicted RBP17.99■□□□□ 0.47
CACNA1A-259ENST00000638114 ATF6P18850 670 aa17.99■□□□□ 0.47
CACNA1A-259ENST00000638114 ACAT1P24752 427 aaKnown RBP17.99■□□□□ 0.47
CACNA1A-259ENST00000638114 SNW1Q13573 536 aaKnown RBP17.99■□□□□ 0.47
CACNA1A-259ENST00000638114 TAF12Q16514 161 aa17.99■□□□□ 0.47
CACNA1A-259ENST00000638114 ZSCAN18Q8TBC5 510 aaPredicted RBP17.99■□□□□ 0.47
CACNA1A-259ENST00000638114 GIPC2Q8TF65 315 aa17.99■□□□□ 0.47
CACNA1A-259ENST00000638114 SMARCD2Q92925 531 aa17.99■□□□□ 0.47
CACNA1A-259ENST00000638114 CCDC47Q96A33 483 aaKnown RBP17.99■□□□□ 0.47
CACNA1A-259ENST00000638114 ACBD6Q9BR61 282 aa17.99■□□□□ 0.47
CACNA1A-259ENST00000638114 ZNF334Q9HCZ1 680 aaPredicted RBP17.99■□□□□ 0.47
CACNA1A-259ENST00000638114 TMLHEQ9NVH6 421 aa17.99■□□□□ 0.47
CACNA1A-259ENST00000638114 PIEZO1Q92508 2521 aa17.98■□□□□ 0.47
CACNA1A-259ENST00000638114 H0Y858 1186 aa17.98■□□□□ 0.47
CACNA1A-259ENST00000638114 FGF19O95750 216 aa17.98■□□□□ 0.47
CACNA1A-259ENST00000638114 GABRR2P28476 465 aa17.98■□□□□ 0.47
CACNA1A-259ENST00000638114 HOXD11P31277 338 aaPredicted RBP17.98■□□□□ 0.47
CACNA1A-259ENST00000638114 LHX1P48742 406 aa17.98■□□□□ 0.47
CACNA1A-259ENST00000638114 GRM2Q14416 872 aa17.98■□□□□ 0.47
CACNA1A-259ENST00000638114 MLF2Q15773 248 aaPredicted RBP17.98■□□□□ 0.47
CACNA1A-259ENST00000638114 NFE2Q16621 373 aaPredicted RBP17.98■□□□□ 0.47
CACNA1A-259ENST00000638114 SOWAHAQ2M3V2 549 aa17.98■□□□□ 0.47
CACNA1A-259ENST00000638114 INTS6LQ5JSJ4 861 aaKnown RBP17.98■□□□□ 0.47
CACNA1A-259ENST00000638114 PHLDB3Q6NSJ2 640 aa17.98■□□□□ 0.47
CACNA1A-259ENST00000638114 KRBA2Q6ZNG9 492 aa17.98■□□□□ 0.47
CACNA1A-259ENST00000638114 OSTM1Q86WC4 334 aa17.98■□□□□ 0.47
CACNA1A-259ENST00000638114 SPATA18Q8TC71 538 aa17.98■□□□□ 0.47
CACNA1A-259ENST00000638114 SHDQ96IW2 340 aa17.98■□□□□ 0.47
CACNA1A-259ENST00000638114 PI4K2AQ9BTU6 479 aa17.98■□□□□ 0.47
CACNA1A-259ENST00000638114 GPR88Q9GZN0 384 aa17.98■□□□□ 0.47
CACNA1A-259ENST00000638114 IRF2BPLQ9H1B7 796 aa17.98■□□□□ 0.47
CACNA1A-259ENST00000638114 ATXN3LQ9H3M9 355 aa17.98■□□□□ 0.47
CACNA1A-259ENST00000638114 FAM86C1Q9NVL1 165 aa17.98■□□□□ 0.47
CACNA1A-259ENST00000638114 GABRDO14764 452 aa17.97■□□□□ 0.47
CACNA1A-259ENST00000638114 HCRTO43612 131 aa17.97■□□□□ 0.47
CACNA1A-259ENST00000638114 PCSK1P29120 753 aa17.97■□□□□ 0.47
CACNA1A-259ENST00000638114 VIPR2P41587 438 aa17.97■□□□□ 0.47
CACNA1A-259ENST00000638114 NUCB2P80303 420 aa17.97■□□□□ 0.47
CACNA1A-259ENST00000638114 SLC44A4Q53GD3 710 aa17.97■□□□□ 0.47
CACNA1A-259ENST00000638114 STXBP5Q5T5C0 1151 aa17.97■□□□□ 0.47
CACNA1A-259ENST00000638114 GAREM2Q75VX8 874 aa17.97■□□□□ 0.47
CACNA1A-259ENST00000638114 DPH6Q7L8W6 267 aa17.97■□□□□ 0.47
CACNA1A-259ENST00000638114 ALYREFQ86V81 257 aaKnown RBP17.97■□□□□ 0.47
CACNA1A-259ENST00000638114 CCDC105Q8IYK2 499 aa17.97■□□□□ 0.47
CACNA1A-259ENST00000638114 ATOH1Q92858 354 aaPredicted RBP17.97■□□□□ 0.47
CACNA1A-259ENST00000638114 GCNAQ96QF7 691 aa17.97■□□□□ 0.47
CACNA1A-259ENST00000638114 MMS19Q96T76 1030 aa17.97■□□□□ 0.47
CACNA1A-259ENST00000638114 KCTD10Q9H3F6 313 aa17.97■□□□□ 0.47
CACNA1A-259ENST00000638114 GTF3C4Q9UKN8 822 aa17.97■□□□□ 0.47
CACNA1A-259ENST00000638114 ZNF202O95125 648 aa17.96■□□□□ 0.47
CACNA1A-259ENST00000638114 CST3P01034 146 aaPredicted RBP17.96■□□□□ 0.47
CACNA1A-259ENST00000638114 CASP4P49662 377 aa17.96■□□□□ 0.47
CACNA1A-259ENST00000638114 STARD6P59095 220 aa17.96■□□□□ 0.47
CACNA1A-259ENST00000638114 PRKCQQ04759 706 aa17.96■□□□□ 0.47
CACNA1A-259ENST00000638114 DPYDQ12882 1025 aa17.96■□□□□ 0.47
CACNA1A-259ENST00000638114 TRPC3Q13507 836 aa17.96■□□□□ 0.47
CACNA1A-259ENST00000638114 ARHGAP15Q53QZ3 475 aa17.96■□□□□ 0.47
CACNA1A-259ENST00000638114 VITQ6UXI7 678 aa17.96■□□□□ 0.47
CACNA1A-259ENST00000638114 DTWD2Q8NBA8 298 aa17.96■□□□□ 0.47
CACNA1A-259ENST00000638114 ZNF516Q92618 1163 aa17.96■□□□□ 0.47
CACNA1A-259ENST00000638114 PHOX2BQ99453 314 aa17.96■□□□□ 0.47
CACNA1A-259ENST00000638114 TRMT61BQ9BVS5 477 aaKnown RBP17.96■□□□□ 0.47
CACNA1A-259ENST00000638114 FOXQ1Q9C009 403 aa17.96■□□□□ 0.47
CACNA1A-259ENST00000638114 GZF1Q9H116 711 aaPredicted RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms