RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 CASP4P49662 377 aa19.06■□□□□ 0.64
PNKP-230ENST00000638016 RBP5P82980 135 aa19.06■□□□□ 0.64
PNKP-230ENST00000638016 CYP24A1Q07973 514 aa19.06■□□□□ 0.64
PNKP-230ENST00000638016 VITQ6UXI7 678 aa19.06■□□□□ 0.64
PNKP-230ENST00000638016 GAREM2Q75VX8 874 aa19.06■□□□□ 0.64
PNKP-230ENST00000638016 DNAJB7Q7Z6W7 309 aaPredicted RBP19.06■□□□□ 0.64
PNKP-230ENST00000638016 ZSCAN18Q8TBC5 510 aaPredicted RBP19.06■□□□□ 0.64
PNKP-230ENST00000638016 PSMG2Q969U7 264 aa19.06■□□□□ 0.64
PNKP-230ENST00000638016 ELMO3Q96BJ8 720 aa19.06■□□□□ 0.64
PNKP-230ENST00000638016 PI4K2AQ9BTU6 479 aa19.06■□□□□ 0.64
PNKP-230ENST00000638016 EXOC1Q9NV70 894 aa19.06■□□□□ 0.64
PNKP-230ENST00000638016 TICRRQ7Z2Z1 1910 aa19.06■□□□□ 0.64
PNKP-230ENST00000638016 COL4A2P08572 1712 aa19.05■□□□□ 0.64
PNKP-230ENST00000638016 CST3P01034 146 aaPredicted RBP19.05■□□□□ 0.64
PNKP-230ENST00000638016 TNNC2P02585 160 aa19.05■□□□□ 0.64
PNKP-230ENST00000638016 RFX1P22670 979 aa19.05■□□□□ 0.64
PNKP-230ENST00000638016 SYKP43405 635 aa19.05■□□□□ 0.64
PNKP-230ENST00000638016 MRE11P49959 708 aa19.05■□□□□ 0.64
PNKP-230ENST00000638016 CYP4F8P98187 520 aa19.05■□□□□ 0.64
PNKP-230ENST00000638016 PLD1Q13393 1074 aa19.05■□□□□ 0.64
PNKP-230ENST00000638016 KNOP1Q1ED39 458 aaKnown RBP19.05■□□□□ 0.64
PNKP-230ENST00000638016 SOWAHAQ2M3V2 549 aa19.05■□□□□ 0.64
PNKP-230ENST00000638016 HS2ST1Q7LGA3 356 aa19.05■□□□□ 0.64
PNKP-230ENST00000638016 WDR49Q8IV35 697 aa19.05■□□□□ 0.64
PNKP-230ENST00000638016 ADGRF2Q8IZF7 708 aa19.05■□□□□ 0.64
PNKP-230ENST00000638016 FSIP1Q8NA03 581 aa19.05■□□□□ 0.64
PNKP-230ENST00000638016 XXYLT1Q8NBI6 393 aa19.05■□□□□ 0.64
PNKP-230ENST00000638016 FAM200AQ8TCP9 573 aa19.05■□□□□ 0.64
PNKP-230ENST00000638016 ZNF516Q92618 1163 aa19.05■□□□□ 0.64
PNKP-230ENST00000638016 ELSPBP1Q96BH3 223 aa19.05■□□□□ 0.64
PNKP-230ENST00000638016 HPDLQ96IR7 371 aa19.05■□□□□ 0.64
PNKP-230ENST00000638016 PKMYT1Q99640 499 aa19.05■□□□□ 0.64
PNKP-230ENST00000638016 CGRRF1Q99675 332 aa19.05■□□□□ 0.64
PNKP-230ENST00000638016 PRRX2Q99811 253 aa19.05■□□□□ 0.64
PNKP-230ENST00000638016 MKNK1Q9BUB5 465 aa19.05■□□□□ 0.64
PNKP-230ENST00000638016 SLITRK6Q9H5Y7 841 aa19.05■□□□□ 0.64
PNKP-230ENST00000638016 ZFP14Q9HCL3 533 aa19.05■□□□□ 0.64
PNKP-230ENST00000638016 GDAP2Q9NXN4 497 aa19.05■□□□□ 0.64
PNKP-230ENST00000638016 MTF2Q9Y483 593 aaPredicted RBP19.05■□□□□ 0.64
PNKP-230ENST00000638016 NME7Q9Y5B8 376 aa19.05■□□□□ 0.64
PNKP-230ENST00000638016 MIA3Q5JRA6 1907 aa19.05■□□□□ 0.64
PNKP-230ENST00000638016 F5P12259 2224 aa19.05■□□□□ 0.64
PNKP-230ENST00000638016 FAM237AA0A1B0GTK4 181 aa19.04■□□□□ 0.64
PNKP-230ENST00000638016 HUS1O60921 280 aa19.04■□□□□ 0.64
PNKP-230ENST00000638016 OBSL1O75147 1896 aa19.04■□□□□ 0.64
PNKP-230ENST00000638016 ATP2C2O75185 946 aa19.04■□□□□ 0.64
PNKP-230ENST00000638016 MICAL2O94851 1124 aa19.04■□□□□ 0.64
PNKP-230ENST00000638016 HAPLN1P10915 354 aaPredicted RBP19.04■□□□□ 0.64
PNKP-230ENST00000638016 GLULP15104 373 aa19.04■□□□□ 0.64
PNKP-230ENST00000638016 GABRR2P28476 465 aa19.04■□□□□ 0.64
PNKP-230ENST00000638016 PSMD6Q15008 389 aa19.04■□□□□ 0.64
PNKP-230ENST00000638016 MLF2Q15773 248 aaPredicted RBP19.04■□□□□ 0.64
PNKP-230ENST00000638016 DUOXA2Q1HG44 320 aa19.04■□□□□ 0.64
PNKP-230ENST00000638016 SLC44A4Q53GD3 710 aa19.04■□□□□ 0.64
PNKP-230ENST00000638016 INTS6LQ5JSJ4 861 aaKnown RBP19.04■□□□□ 0.64
PNKP-230ENST00000638016 TRAPPC11Q7Z392 1133 aa19.04■□□□□ 0.64
PNKP-230ENST00000638016 CCDC105Q8IYK2 499 aa19.04■□□□□ 0.64
PNKP-230ENST00000638016 KBTBD7Q8WVZ9 684 aa19.04■□□□□ 0.64
PNKP-230ENST00000638016 ATOH1Q92858 354 aaPredicted RBP19.04■□□□□ 0.64
PNKP-230ENST00000638016 SMARCD2Q92925 531 aa19.04■□□□□ 0.64
PNKP-230ENST00000638016 IL21Q9HBE4 155 aa19.04■□□□□ 0.64
PNKP-230ENST00000638016 HEBP1Q9NRV9 189 aa19.04■□□□□ 0.64
PNKP-230ENST00000638016 CACNA1IQ9P0X4 2223 aa19.04■□□□□ 0.64
PNKP-230ENST00000638016 SHISA7A6NL88 538 aa19.03■□□□□ 0.64
PNKP-230ENST00000638016 RPN1P04843 607 aaKnown RBP19.03■□□□□ 0.64
PNKP-230ENST00000638016 TNNI1P19237 187 aa19.03■□□□□ 0.64
PNKP-230ENST00000638016 LMO2P25791 158 aa19.03■□□□□ 0.64
PNKP-230ENST00000638016 PSMC1P62191 440 aaKnown RBP19.03■□□□□ 0.64
PNKP-230ENST00000638016 TSPY1Q01534 308 aa19.03■□□□□ 0.64
PNKP-230ENST00000638016 C12orf56Q8IXR9 622 aa19.03■□□□□ 0.64
PNKP-230ENST00000638016 TOP6BLQ8N6T0 577 aa19.03■□□□□ 0.64
PNKP-230ENST00000638016 DTWD2Q8NBA8 298 aa19.03■□□□□ 0.64
PNKP-230ENST00000638016 LEMD2Q8NC56 503 aa19.03■□□□□ 0.64
PNKP-230ENST00000638016 SPPL2BQ8TCT7 592 aa19.03■□□□□ 0.64
PNKP-230ENST00000638016 KCTD10Q9H3F6 313 aa19.03■□□□□ 0.64
PNKP-230ENST00000638016 ATXN3LQ9H3M9 355 aa19.03■□□□□ 0.64
PNKP-230ENST00000638016 KIAA1586Q9HCI6 787 aa19.03■□□□□ 0.64
PNKP-230ENST00000638016 GTF3C4Q9UKN8 822 aa19.03■□□□□ 0.64
PNKP-230ENST00000638016 PCDHB5Q9Y5E4 795 aa19.03■□□□□ 0.64
PNKP-230ENST00000638016 DENND4CQ5VZ89 1909 aa19.02■□□□□ 0.64
PNKP-230ENST00000638016 MYBPHLA2RUH7 354 aa19.02■□□□□ 0.64
PNKP-230ENST00000638016 GABRDO14764 452 aa19.02■□□□□ 0.64
PNKP-230ENST00000638016 EXOC3O60645 756 aa19.02■□□□□ 0.64
PNKP-230ENST00000638016 PRPF40AO75400 957 aaKnown RBP19.02■□□□□ 0.64
PNKP-230ENST00000638016 CYP2F1P24903 491 aa19.02■□□□□ 0.64
PNKP-230ENST00000638016 STARD6P59095 220 aa19.02■□□□□ 0.64
PNKP-230ENST00000638016 SURF1Q15526 300 aa19.02■□□□□ 0.64
PNKP-230ENST00000638016 DDR2Q16832 855 aa19.02■□□□□ 0.64
PNKP-230ENST00000638016 GPR158Q5T848 1215 aa19.02■□□□□ 0.64
PNKP-230ENST00000638016 PHLDB3Q6NSJ2 640 aa19.02■□□□□ 0.64
PNKP-230ENST00000638016 TPRG1Q6ZUI0 275 aa19.02■□□□□ 0.64
PNKP-230ENST00000638016 DCP1BQ8IZD4 617 aaKnown RBP19.02■□□□□ 0.64
PNKP-230ENST00000638016 PJA1Q8NG27 643 aa19.02■□□□□ 0.64
PNKP-230ENST00000638016 LRRC3BQ96PB8 259 aa19.02■□□□□ 0.64
PNKP-230ENST00000638016 FNBP1Q96RU3 617 aa19.02■□□□□ 0.64
PNKP-230ENST00000638016 ACBD6Q9BR61 282 aa19.02■□□□□ 0.64
PNKP-230ENST00000638016 MRPL45Q9BRJ2 306 aaKnown RBP19.02■□□□□ 0.64
PNKP-230ENST00000638016 SMG9Q9H0W8 520 aaKnown RBP19.02■□□□□ 0.64
PNKP-230ENST00000638016 DLGAP2Q9P1A6 1054 aa19.02■□□□□ 0.64
PNKP-230ENST00000638016 HSFX1Q9UBD0 423 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms