RNA–Protein interactions for RNA: ENST00000637777.1

CACNA1A-249, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 728 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-249ENST00000637777 ITIH5Q86UX2 942 aa15.44■□□□□ 0.06
CACNA1A-249ENST00000637777 SPATA2LQ8IUW3 424 aaPredicted RBP15.44■□□□□ 0.06
CACNA1A-249ENST00000637777 TTC9BQ8N6N2 239 aa15.44■□□□□ 0.06
CACNA1A-249ENST00000637777 CCDC150Q8NCX0 1101 aa15.44■□□□□ 0.06
CACNA1A-249ENST00000637777 OR6B3Q8NGW1 331 aa15.44■□□□□ 0.06
CACNA1A-249ENST00000637777 CXorf38Q8TB03 319 aa15.44■□□□□ 0.06
CACNA1A-249ENST00000637777 SPPL2BQ8TCT7 592 aa15.44■□□□□ 0.06
CACNA1A-249ENST00000637777 PLEKHO2Q8TD55 490 aa15.44■□□□□ 0.06
CACNA1A-249ENST00000637777 TMC2Q8TDI7 906 aa15.44■□□□□ 0.06
CACNA1A-249ENST00000637777 C2orf15Q8WU43 125 aaKnown RBP15.44■□□□□ 0.06
CACNA1A-249ENST00000637777 ZNF516Q92618 1163 aa15.44■□□□□ 0.06
CACNA1A-249ENST00000637777 FGF13Q92913 245 aa15.44■□□□□ 0.06
CACNA1A-249ENST00000637777 MCRS1Q96EZ8 462 aa15.44■□□□□ 0.06
CACNA1A-249ENST00000637777 RTP3Q9BQQ7 232 aa15.44■□□□□ 0.06
CACNA1A-249ENST00000637777 PI4K2AQ9BTU6 479 aa15.44■□□□□ 0.06
CACNA1A-249ENST00000637777 KCNK12Q9HB15 430 aa15.44■□□□□ 0.06
CACNA1A-249ENST00000637777 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.44■□□□□ 0.067e-11■■■■■ 260.8
CACNA1A-249ENST00000637777 IGSF9Q9P2J2 1179 aa15.44■□□□□ 0.06
CACNA1A-249ENST00000637777 EPS15L1Q9UBC2 864 aa15.44■□□□□ 0.06
CACNA1A-249ENST00000637777 MAN1B1Q9UKM7 699 aa15.44■□□□□ 0.06
CACNA1A-249ENST00000637777 FBXL21Q9UKT6 434 aa15.44■□□□□ 0.06
CACNA1A-249ENST00000637777 ZFP37Q9Y6Q3 630 aaPredicted RBP15.44■□□□□ 0.06
CACNA1A-249ENST00000637777 PDGFRBP09619 1106 aa15.43■□□□□ 0.06
CACNA1A-249ENST00000637777 P4HA1P13674 534 aa15.43■□□□□ 0.06
CACNA1A-249ENST00000637777 CEBPBP17676 345 aa15.43■□□□□ 0.06
CACNA1A-249ENST00000637777 RFX1P22670 979 aa15.43■□□□□ 0.06
CACNA1A-249ENST00000637777 ATICP31939 592 aa15.43■□□□□ 0.06
CACNA1A-249ENST00000637777 PSMC1P62191 440 aaKnown RBP15.43■□□□□ 0.06
CACNA1A-249ENST00000637777 SIGLEC14Q08ET2 396 aa15.43■□□□□ 0.06
CACNA1A-249ENST00000637777 TDGQ13569 410 aa15.43■□□□□ 0.06
CACNA1A-249ENST00000637777 NFIL3Q16649 462 aa15.43■□□□□ 0.06
CACNA1A-249ENST00000637777 EDRF1Q3B7T1 1238 aa15.43■□□□□ 0.06
CACNA1A-249ENST00000637777 DCAF17Q5H9S7 520 aaPredicted RBP15.43■□□□□ 0.06
CACNA1A-249ENST00000637777 MTSS1LQ765P7 747 aa15.43■□□□□ 0.06
CACNA1A-249ENST00000637777 DPH6Q7L8W6 267 aa15.43■□□□□ 0.06
CACNA1A-249ENST00000637777 OSTM1Q86WC4 334 aa15.43■□□□□ 0.06
CACNA1A-249ENST00000637777 UBALD2Q8IYN6 164 aa15.43■□□□□ 0.06
CACNA1A-249ENST00000637777 HS6ST3Q8IZP7 471 aa15.43■□□□□ 0.06
CACNA1A-249ENST00000637777 LEMD2Q8NC56 503 aa15.43■□□□□ 0.06
CACNA1A-249ENST00000637777 SPATA18Q8TC71 538 aa15.43■□□□□ 0.06
CACNA1A-249ENST00000637777 GIPC2Q8TF65 315 aa15.43■□□□□ 0.06
CACNA1A-249ENST00000637777 RSAD2Q8WXG1 361 aa15.43■□□□□ 0.06
CACNA1A-249ENST00000637777 GCNAQ96QF7 691 aa15.43■□□□□ 0.06
CACNA1A-249ENST00000637777 SYT15Q9BQS2 421 aa15.43■□□□□ 0.06
CACNA1A-249ENST00000637777 ACBD6Q9BR61 282 aa15.43■□□□□ 0.06
CACNA1A-249ENST00000637777 CRISPLD1Q9H336 500 aa15.43■□□□□ 0.06
CACNA1A-249ENST00000637777 SMOC2Q9H3U7 446 aa15.43■□□□□ 0.06
CACNA1A-249ENST00000637777 CEP72Q9P209 647 aa15.43■□□□□ 0.06
CACNA1A-249ENST00000637777 TRIM49BA6NDI0 452 aa15.42■□□□□ 0.06
CACNA1A-249ENST00000637777 TMEM221A6NGB7 291 aa15.42■□□□□ 0.06
CACNA1A-249ENST00000637777 M0R296 226 aa15.42■□□□□ 0.06
CACNA1A-249ENST00000637777 MAPK13O15264 365 aa15.42■□□□□ 0.06
CACNA1A-249ENST00000637777 HCRTO43612 131 aa15.42■□□□□ 0.06
CACNA1A-249ENST00000637777 GPR37L1O60883 481 aa15.42■□□□□ 0.06
CACNA1A-249ENST00000637777 PAPLNO95428 1278 aa15.42■□□□□ 0.06
CACNA1A-249ENST00000637777 VNN2O95498 520 aa15.42■□□□□ 0.06
CACNA1A-249ENST00000637777 GNL1P36915 607 aaPredicted RBP15.42■□□□□ 0.06
CACNA1A-249ENST00000637777 PPP1R2P41236 205 aa15.42■□□□□ 0.06
CACNA1A-249ENST00000637777 GCLMP48507 274 aa15.42■□□□□ 0.06
CACNA1A-249ENST00000637777 CYP27A1Q02318 531 aa15.42■□□□□ 0.06
CACNA1A-249ENST00000637777 SLC5A9Q2M3M2 681 aa15.42■□□□□ 0.06
CACNA1A-249ENST00000637777 TRIM67Q6ZTA4 783 aa15.42■□□□□ 0.06
CACNA1A-249ENST00000637777 LRRTM3Q86VH5 581 aa15.42■□□□□ 0.06
CACNA1A-249ENST00000637777 SCN4BQ8IWT1 228 aa15.42■□□□□ 0.06
CACNA1A-249ENST00000637777 NPAS3Q8IXF0 933 aa15.42■□□□□ 0.06
CACNA1A-249ENST00000637777 ELOA2Q8IYF1 753 aaPredicted RBP15.42■□□□□ 0.06
CACNA1A-249ENST00000637777 TCEAL4Q96EI5 215 aa15.42■□□□□ 0.06
CACNA1A-249ENST00000637777 GBP4Q96PP9 640 aa15.42■□□□□ 0.06
CACNA1A-249ENST00000637777 LPIN3Q9BQK8 851 aa15.42■□□□□ 0.06
CACNA1A-249ENST00000637777 MRPL45Q9BRJ2 306 aaKnown RBP15.42■□□□□ 0.06
CACNA1A-249ENST00000637777 LRFN3Q9BTN0 628 aa15.42■□□□□ 0.06
CACNA1A-249ENST00000637777 MFSD1Q9H3U5 465 aa15.42■□□□□ 0.06
CACNA1A-249ENST00000637777 GTF3C4Q9UKN8 822 aa15.42■□□□□ 0.06
CACNA1A-249ENST00000637777 CDH9Q9ULB4 789 aa15.42■□□□□ 0.06
CACNA1A-249ENST00000637777 CTNND2Q9UQB3 1225 aa15.42■□□□□ 0.06
CACNA1A-249ENST00000637777 NUMBLQ9Y6R0 609 aa15.42■□□□□ 0.06
CACNA1A-249ENST00000637777 NOTCH4Q99466 2003 aa15.41■□□□□ 0.06
CACNA1A-249ENST00000637777 A8MXQ7 604 aa15.41■□□□□ 0.06
CACNA1A-249ENST00000637777 PRR33A8MZF0 331 aa15.41■□□□□ 0.06
CACNA1A-249ENST00000637777 C4BPAP04003 597 aaKnown RBP15.41■□□□□ 0.06
CACNA1A-249ENST00000637777 GJA1P17302 382 aa15.41■□□□□ 0.06
CACNA1A-249ENST00000637777 WARSP23381 471 aaKnown RBP15.41■□□□□ 0.06
CACNA1A-249ENST00000637777 RAP1GAPP47736 663 aa15.41■□□□□ 0.06
CACNA1A-249ENST00000637777 FKBP3Q00688 224 aaKnown RBP15.41■□□□□ 0.06
CACNA1A-249ENST00000637777 LRRC63Q05C16 580 aa15.41■□□□□ 0.06
CACNA1A-249ENST00000637777 ZCWPW2Q504Y3 356 aa15.41■□□□□ 0.06
CACNA1A-249ENST00000637777 C4orf50Q6ZRC1 276 aa15.41■□□□□ 0.06
CACNA1A-249ENST00000637777 SV2AQ7L0J3 742 aa15.41■□□□□ 0.06
CACNA1A-249ENST00000637777 SUGP1Q8IWZ8 645 aaKnown RBP15.41■□□□□ 0.06
CACNA1A-249ENST00000637777 ADSSL1Q8N142 457 aa15.41■□□□□ 0.06
CACNA1A-249ENST00000637777 GPR152Q8TDT2 470 aa15.41■□□□□ 0.06
CACNA1A-249ENST00000637777 TMEM174Q8WUU8 243 aa15.41■□□□□ 0.06
CACNA1A-249ENST00000637777 KBTBD7Q8WVZ9 684 aa15.41■□□□□ 0.06
CACNA1A-249ENST00000637777 PBXIP1Q96AQ6 731 aa15.41■□□□□ 0.06
CACNA1A-249ENST00000637777 ELMO3Q96BJ8 720 aa15.41■□□□□ 0.06
CACNA1A-249ENST00000637777 IPO9Q96P70 1041 aaKnown RBP15.41■□□□□ 0.06
CACNA1A-249ENST00000637777 KXD1Q9BQD3 176 aa15.41■□□□□ 0.06
CACNA1A-249ENST00000637777 GZF1Q9H116 711 aaPredicted RBP15.41■□□□□ 0.06
CACNA1A-249ENST00000637777 SMYD3Q9H7B4 428 aa15.41■□□□□ 0.06
CACNA1A-249ENST00000637777 TMLHEQ9NVH6 421 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms