RNA–Protein interactions for RNA: ENST00000637223.1

CLN6-218, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-218ENST00000637223 HSD3B7Q9H2F3 369 aa18.41■□□□□ 0.54
CLN6-218ENST00000637223 SNX25Q9H3E2 840 aa18.41■□□□□ 0.54
CLN6-218ENST00000637223 CBX8Q9HC52 389 aa18.41■□□□□ 0.54
CLN6-218ENST00000637223 FSD2A1L4K1 749 aa18.4■□□□□ 0.54
CLN6-218ENST00000637223 BECN2A8MW95 431 aa18.4■□□□□ 0.54
CLN6-218ENST00000637223 PES1O00541 588 aaKnown RBP18.4■□□□□ 0.54
CLN6-218ENST00000637223 GABRDO14764 452 aa18.4■□□□□ 0.54
CLN6-218ENST00000637223 PMM2O15305 246 aa18.4■□□□□ 0.54
CLN6-218ENST00000637223 TBX10O75333 385 aa18.4■□□□□ 0.54
CLN6-218ENST00000637223 TACC1O75410 805 aa18.4■□□□□ 0.54
CLN6-218ENST00000637223 LHX1P48742 406 aa18.4■□□□□ 0.54
CLN6-218ENST00000637223 COL19A1Q14993 1142 aa18.4■□□□□ 0.54
CLN6-218ENST00000637223 IQCB1Q15051 598 aa18.4■□□□□ 0.54
CLN6-218ENST00000637223 KRT31Q15323 416 aa18.4■□□□□ 0.54
CLN6-218ENST00000637223 MIIPQ5JXC2 388 aa18.4■□□□□ 0.54
CLN6-218ENST00000637223 OR6B3Q8NGW1 331 aa18.4■□□□□ 0.54
CLN6-218ENST00000637223 CASP10Q92851 521 aa18.4■□□□□ 0.54
CLN6-218ENST00000637223 TATDN2Q93075 761 aa18.4■□□□□ 0.54
CLN6-218ENST00000637223 OXCT2Q9BYC2 517 aaPredicted RBP18.4■□□□□ 0.54
CLN6-218ENST00000637223 UBE2ZQ9H832 354 aaPredicted RBP18.4■□□□□ 0.54
CLN6-218ENST00000637223 MAN1C1Q9NR34 630 aa18.4■□□□□ 0.54
CLN6-218ENST00000637223 MYO7AQ13402 2215 aa18.39■□□□□ 0.54
CLN6-218ENST00000637223 PDGFRBP09619 1106 aa18.39■□□□□ 0.53
CLN6-218ENST00000637223 WEE2P0C1S8 567 aa18.39■□□□□ 0.53
CLN6-218ENST00000637223 SRGAP2BP0DMP2 458 aa18.39■□□□□ 0.53
CLN6-218ENST00000637223 ZNF18P17022 549 aa18.39■□□□□ 0.53
CLN6-218ENST00000637223 CDK11BP21127 795 aaKnown RBP18.39■□□□□ 0.53
CLN6-218ENST00000637223 LMO2P25791 158 aa18.39■□□□□ 0.53
CLN6-218ENST00000637223 LTBRP36941 435 aa18.39■□□□□ 0.53
CLN6-218ENST00000637223 LILRA6Q6PI73 481 aa18.39■□□□□ 0.53
CLN6-218ENST00000637223 LRSAM1Q6UWE0 723 aa18.39■□□□□ 0.53
CLN6-218ENST00000637223 RNF19BQ6ZMZ0 732 aa18.39■□□□□ 0.53
CLN6-218ENST00000637223 LUZP1Q86V48 1076 aa18.39■□□□□ 0.53
CLN6-218ENST00000637223 GJD3Q8N144 294 aa18.39■□□□□ 0.53
CLN6-218ENST00000637223 KREMEN2Q8NCW0 462 aa18.39■□□□□ 0.53
CLN6-218ENST00000637223 EHBP1Q8NDI1 1231 aa18.39■□□□□ 0.53
CLN6-218ENST00000637223 LMO3Q8TAP4 145 aa18.39■□□□□ 0.53
CLN6-218ENST00000637223 SPATA18Q8TC71 538 aa18.39■□□□□ 0.53
CLN6-218ENST00000637223 PGLYRP2Q96PD5 576 aa18.39■□□□□ 0.53
CLN6-218ENST00000637223 CRACR2AQ9BSW2 395 aa18.39■□□□□ 0.53
CLN6-218ENST00000637223 INTS2Q9H0H0 1204 aaKnown RBP18.39■□□□□ 0.53
CLN6-218ENST00000637223 ZCWPW1Q9H0M4 648 aa18.39■□□□□ 0.53
CLN6-218ENST00000637223 VPS16Q9H269 839 aa18.39■□□□□ 0.53
CLN6-218ENST00000637223 NDST4Q9H3R1 872 aa18.39■□□□□ 0.53
CLN6-218ENST00000637223 TSPY26PQ9H489 355 aa18.39■□□□□ 0.53
CLN6-218ENST00000637223 GCNT4Q9P109 453 aa18.39■□□□□ 0.53
CLN6-218ENST00000637223 CLEC1BQ9P126 229 aa18.39■□□□□ 0.53
CLN6-218ENST00000637223 FBXW11Q9UKB1 542 aa18.39■□□□□ 0.53
CLN6-218ENST00000637223 NME7Q9Y5B8 376 aa18.39■□□□□ 0.53
CLN6-218ENST00000637223 TSC2P49815 1807 aa18.38■□□□□ 0.53
CLN6-218ENST00000637223 SPDYE4A6NLX3 237 aa18.38■□□□□ 0.53
CLN6-218ENST00000637223 H3BQ06 376 aaPredicted RBP18.38■□□□□ 0.53
CLN6-218ENST00000637223 ATP1A3P13637 1013 aa18.38■□□□□ 0.53
CLN6-218ENST00000637223 KCNA5P22460 613 aa18.38■□□□□ 0.53
CLN6-218ENST00000637223 PCSK1P29120 753 aa18.38■□□□□ 0.53
CLN6-218ENST00000637223 GNL1P36915 607 aaPredicted RBP18.38■□□□□ 0.53
CLN6-218ENST00000637223 PSMC1P62191 440 aaKnown RBP18.38■□□□□ 0.53
CLN6-218ENST00000637223 TSPY1Q01534 308 aa18.38■□□□□ 0.53
CLN6-218ENST00000637223 CLUL1Q15846 466 aa18.38■□□□□ 0.53
CLN6-218ENST00000637223 CCDC142Q17RM4 750 aa18.38■□□□□ 0.53
CLN6-218ENST00000637223 SLC39A12Q504Y0 691 aa18.38■□□□□ 0.53
CLN6-218ENST00000637223 TMEM184AQ6ZMB5 413 aa18.38■□□□□ 0.53
CLN6-218ENST00000637223 LRRTM3Q86VH5 581 aa18.38■□□□□ 0.53
CLN6-218ENST00000637223 C12orf76Q8N812 135 aaPredicted RBP18.38■□□□□ 0.53
CLN6-218ENST00000637223 ANKRD20A12PQ8NF67 263 aa18.38■□□□□ 0.53
CLN6-218ENST00000637223 ARID3AQ99856 593 aa18.38■□□□□ 0.53
CLN6-218ENST00000637223 SYT15Q9BQS2 421 aa18.38■□□□□ 0.53
CLN6-218ENST00000637223 ACBD6Q9BR61 282 aa18.38■□□□□ 0.53
CLN6-218ENST00000637223 APOL5Q9BWW9 433 aa18.38■□□□□ 0.53
CLN6-218ENST00000637223 BCO2Q9BYV7 579 aa18.38■□□□□ 0.53
CLN6-218ENST00000637223 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.37■□□□□ 0.53
CLN6-218ENST00000637223 A8MXQ7 604 aa18.37■□□□□ 0.53
CLN6-218ENST00000637223 ATP2C2O75185 946 aa18.37■□□□□ 0.53
CLN6-218ENST00000637223 ABLIM3O94929 683 aa18.37■□□□□ 0.53
CLN6-218ENST00000637223 CAVIN2O95810 425 aa18.37■□□□□ 0.53
CLN6-218ENST00000637223 TPM2P07951 284 aa18.37■□□□□ 0.53
CLN6-218ENST00000637223 FAM163BP0C2L3 166 aa18.37■□□□□ 0.53
CLN6-218ENST00000637223 CD58P19256 250 aa18.37■□□□□ 0.53
CLN6-218ENST00000637223 SSTR3P32745 418 aaPredicted RBP18.37■□□□□ 0.53
CLN6-218ENST00000637223 COPB1P53618 953 aaKnown RBP18.37■□□□□ 0.53
CLN6-218ENST00000637223 NHLH1Q02575 133 aa18.37■□□□□ 0.53
CLN6-218ENST00000637223 ADCY1Q08828 1119 aa18.37■□□□□ 0.53
CLN6-218ENST00000637223 GPR17Q13304 367 aa18.37■□□□□ 0.53
CLN6-218ENST00000637223 INTS6LQ5JSJ4 861 aaKnown RBP18.37■□□□□ 0.53
CLN6-218ENST00000637223 ANKRD54Q6NXT1 300 aa18.37■□□□□ 0.53
CLN6-218ENST00000637223 GBP6Q6ZN66 633 aa18.37■□□□□ 0.53
CLN6-218ENST00000637223 DCP1BQ8IZD4 617 aaKnown RBP18.37■□□□□ 0.53
CLN6-218ENST00000637223 ZNF461Q8TAF7 563 aa18.37■□□□□ 0.53
CLN6-218ENST00000637223 FAM200AQ8TCP9 573 aa18.37■□□□□ 0.53
CLN6-218ENST00000637223 NT5C1BQ96P26 610 aa18.37■□□□□ 0.53
CLN6-218ENST00000637223 DPEP3Q9H4B8 488 aa18.37■□□□□ 0.53
CLN6-218ENST00000637223 CYP3A43Q9HB55 503 aa18.37■□□□□ 0.53
CLN6-218ENST00000637223 TMLHEQ9NVH6 421 aa18.37■□□□□ 0.53
CLN6-218ENST00000637223 DZANK1Q9NVP4 752 aa18.37■□□□□ 0.53
CLN6-218ENST00000637223 HMGXB4Q9UGU5 601 aa18.37■□□□□ 0.53
CLN6-218ENST00000637223 LIMA1Q9UHB6 759 aaKnown RBP18.37■□□□□ 0.53
CLN6-218ENST00000637223 AFF4Q9UHB7 1163 aaKnown RBP18.37■□□□□ 0.53
CLN6-218ENST00000637223 MTMR11A4FU01 709 aa18.36■□□□□ 0.53
CLN6-218ENST00000637223 SEC24AO95486 1093 aa18.36■□□□□ 0.53
CLN6-218ENST00000637223 VNN2O95498 520 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms