RNA–Protein interactions for RNA: ENST00000636898.1

CHRNA7-221, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,057 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-221ENST00000636898 TMED2Q15363 201 aa16.95■□□□□ 0.3
CHRNA7-221ENST00000636898 SEZ6Q53EL9 994 aa16.95■□□□□ 0.3
CHRNA7-221ENST00000636898 RNF43Q68DV7 783 aa16.95■□□□□ 0.3
CHRNA7-221ENST00000636898 CDCA2Q69YH5 1023 aaPredicted RBP16.95■□□□□ 0.3
CHRNA7-221ENST00000636898 PRUNE1Q86TP1 453 aa16.95■□□□□ 0.3
CHRNA7-221ENST00000636898 KLRG1Q96E93 195 aa16.95■□□□□ 0.3
CHRNA7-221ENST00000636898 FRMD8P1Q9BZ68 369 aaPredicted RBP16.95■□□□□ 0.3
CHRNA7-221ENST00000636898 MTMR12Q9C0I1 747 aa16.95■□□□□ 0.3
CHRNA7-221ENST00000636898 AGAP1Q9UPQ3 857 aa16.95■□□□□ 0.3
CHRNA7-221ENST00000636898 OGTO15294 1046 aa16.94■□□□□ 0.3
CHRNA7-221ENST00000636898 HARSP12081 509 aaKnown RBP16.94■□□□□ 0.3
CHRNA7-221ENST00000636898 BRD2P25440 801 aaKnown RBP16.94■□□□□ 0.3
CHRNA7-221ENST00000636898 TNFSF9P41273 254 aa16.94■□□□□ 0.3
CHRNA7-221ENST00000636898 ALDH5A1P51649 535 aaPredicted RBP16.94■□□□□ 0.3
CHRNA7-221ENST00000636898 STAT5BP51692 787 aa16.94■□□□□ 0.3
CHRNA7-221ENST00000636898 MYL6P60660 151 aa16.94■□□□□ 0.3
CHRNA7-221ENST00000636898 NCALDP61601 193 aa16.94■□□□□ 0.3
CHRNA7-221ENST00000636898 CCDC15Q0P6D6 951 aa16.94■□□□□ 0.3
CHRNA7-221ENST00000636898 NEDD9Q14511 834 aa16.94■□□□□ 0.3
CHRNA7-221ENST00000636898 ZNF268Q14587 947 aaPredicted RBP16.94■□□□□ 0.3
CHRNA7-221ENST00000636898 NOL9Q5SY16 702 aaKnown RBP16.94■□□□□ 0.3
CHRNA7-221ENST00000636898 RNASEH2BQ5TBB1 312 aaKnown RBP16.94■□□□□ 0.3
CHRNA7-221ENST00000636898 GPAT2Q6NUI2 795 aa16.94■□□□□ 0.3
CHRNA7-221ENST00000636898 RGS9BPQ6ZS82 235 aa16.94■□□□□ 0.3
CHRNA7-221ENST00000636898 ERICH1Q86X53 443 aa16.94■□□□□ 0.3
CHRNA7-221ENST00000636898 PRPF31Q8WWY3 499 aaKnown RBP16.94■□□□□ 0.3
CHRNA7-221ENST00000636898 FAM167AQ96KS9 214 aa16.94■□□□□ 0.3
CHRNA7-221ENST00000636898 KLHL14Q9P2G3 628 aa16.94■□□□□ 0.3
CHRNA7-221ENST00000636898 SMG5Q9UPR3 1016 aaKnown RBP16.94■□□□□ 0.3
CHRNA7-221ENST00000636898 GAS2O43903 313 aaKnown RBP16.93■□□□□ 0.3
CHRNA7-221ENST00000636898 ASMTLO95671 621 aa16.93■□□□□ 0.3
CHRNA7-221ENST00000636898 TGFB3P10600 412 aa16.93■□□□□ 0.3
CHRNA7-221ENST00000636898 EDNRBP24530 442 aa16.93■□□□□ 0.3
CHRNA7-221ENST00000636898 CNTN2Q02246 1040 aa16.93■□□□□ 0.3
CHRNA7-221ENST00000636898 FSTL1Q12841 308 aa16.93■□□□□ 0.3
CHRNA7-221ENST00000636898 WDR72Q3MJ13 1102 aa16.93■□□□□ 0.3
CHRNA7-221ENST00000636898 SH3D19Q5HYK7 790 aa16.93■□□□□ 0.3
CHRNA7-221ENST00000636898 IER5Q5VY09 327 aa16.93■□□□□ 0.3
CHRNA7-221ENST00000636898 CENPUQ71F23 418 aa16.93■□□□□ 0.3
CHRNA7-221ENST00000636898 PCGF5Q86SE9 256 aa16.93■□□□□ 0.3
CHRNA7-221ENST00000636898 WDTC1Q8N5D0 677 aa16.93■□□□□ 0.3
CHRNA7-221ENST00000636898 SLC35B2Q8TB61 432 aa16.93■□□□□ 0.3
CHRNA7-221ENST00000636898 ACO2Q99798 780 aaKnown RBP16.93■□□□□ 0.3
CHRNA7-221ENST00000636898 SLC24A2Q9UI40 661 aa16.93■□□□□ 0.3
CHRNA7-221ENST00000636898 CPSF3Q9UKF6 684 aaKnown RBP16.93■□□□□ 0.3
CHRNA7-221ENST00000636898 AFG3L2Q9Y4W6 797 aa16.93■□□□□ 0.3
CHRNA7-221ENST00000636898 A0A1B0GUA9 196 aa16.93■□□□□ 0.3
CHRNA7-221ENST00000636898 ZSCAN5DPP0CG00 497 aa16.93■□□□□ 0.3
CHRNA7-221ENST00000636898 NQO1P15559 274 aaKnown RBP16.93■□□□□ 0.3
CHRNA7-221ENST00000636898 SKIV2L2P42285 1042 aaKnown RBP16.93■□□□□ 0.3
CHRNA7-221ENST00000636898 YWHAEP62258 255 aaKnown RBP16.93■□□□□ 0.3
CHRNA7-221ENST00000636898 SCARA3Q6AZY7 606 aa16.93■□□□□ 0.3
CHRNA7-221ENST00000636898 CGB2Q6NT52 195 aa16.93■□□□□ 0.3
CHRNA7-221ENST00000636898 DENND1AQ8TEH3 1009 aa16.93■□□□□ 0.3
CHRNA7-221ENST00000636898 TCP11Q8WWU5 503 aa16.93■□□□□ 0.3
CHRNA7-221ENST00000636898 TCHPQ9BT92 498 aa16.93■□□□□ 0.3
CHRNA7-221ENST00000636898 ECT2Q9H8V3 914 aa16.93■□□□□ 0.3
CHRNA7-221ENST00000636898 NOD2Q9HC29 1040 aa16.93■□□□□ 0.3
CHRNA7-221ENST00000636898 FETUBQ9UGM5 382 aa16.93■□□□□ 0.3
CHRNA7-221ENST00000636898 BRCA1P38398 1863 aaKnown RBP16.93■□□□□ 0.3
CHRNA7-221ENST00000636898 LRRD1A4D1F6 860 aa16.92■□□□□ 0.3
CHRNA7-221ENST00000636898 TTLL13PA6NNM8 815 aa16.92■□□□□ 0.3
CHRNA7-221ENST00000636898 POLR2BP30876 1174 aaKnown RBP16.92■□□□□ 0.3
CHRNA7-221ENST00000636898 NF2P35240 595 aa16.92■□□□□ 0.3
CHRNA7-221ENST00000636898 WDR4P57081 412 aaKnown RBP16.92■□□□□ 0.3
CHRNA7-221ENST00000636898 TRPC3Q13507 836 aa16.92■□□□□ 0.3
CHRNA7-221ENST00000636898 MXD4Q14582 209 aaPredicted RBP16.92■□□□□ 0.3
CHRNA7-221ENST00000636898 ZKSCAN8Q15776 578 aaPredicted RBP16.92■□□□□ 0.3
CHRNA7-221ENST00000636898 TBC1D1Q86TI0 1168 aaPredicted RBP16.92■□□□□ 0.3
CHRNA7-221ENST00000636898 EXOC8Q8IYI6 725 aa16.92■□□□□ 0.3
CHRNA7-221ENST00000636898 FITM2Q8N6M3 262 aa16.92■□□□□ 0.3
CHRNA7-221ENST00000636898 FNIP1Q8TF40 1166 aa16.92■□□□□ 0.3
CHRNA7-221ENST00000636898 NCAPGQ9BPX3 1015 aa16.92■□□□□ 0.3
CHRNA7-221ENST00000636898 PITPNM3Q9BZ71 974 aa16.92■□□□□ 0.3
CHRNA7-221ENST00000636898 LHX5Q9H2C1 402 aa16.92■□□□□ 0.3
CHRNA7-221ENST00000636898 STARD13Q9Y3M8 1113 aa16.92■□□□□ 0.3
CHRNA7-221ENST00000636898 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.92■□□□□ 0.3
CHRNA7-221ENST00000636898 WDR90Q96KV7 1748 aa16.92■□□□□ 0.3
CHRNA7-221ENST00000636898 C3orf70A6NLC5 250 aaPredicted RBP16.92■□□□□ 0.3
CHRNA7-221ENST00000636898 ABLIM1O14639 778 aa16.92■□□□□ 0.3
CHRNA7-221ENST00000636898 KRT7P08729 469 aa16.92■□□□□ 0.3
CHRNA7-221ENST00000636898 EZRP15311 586 aaKnown RBP16.92■□□□□ 0.3
CHRNA7-221ENST00000636898 FOXN2P32314 431 aa16.92■□□□□ 0.3
CHRNA7-221ENST00000636898 MAPK6Q16659 721 aa16.92■□□□□ 0.3
CHRNA7-221ENST00000636898 TXNRD3NBQ6F5E7 133 aa16.92■□□□□ 0.3
CHRNA7-221ENST00000636898 ZBTB33Q86T24 672 aa16.92■□□□□ 0.3
CHRNA7-221ENST00000636898 ZBTB8OSQ8IWT0 167 aa16.92■□□□□ 0.3
CHRNA7-221ENST00000636898 TTC13Q8NBP0 860 aa16.92■□□□□ 0.3
CHRNA7-221ENST00000636898 SEPT1Q8WYJ6 367 aa16.92■□□□□ 0.3
CHRNA7-221ENST00000636898 PRCCQ92733 491 aaPredicted RBP16.92■□□□□ 0.3
CHRNA7-221ENST00000636898 C2orf40Q9H1Z8 148 aa16.92■□□□□ 0.3
CHRNA7-221ENST00000636898 TRABDQ9H4I3 376 aa16.92■□□□□ 0.3
CHRNA7-221ENST00000636898 FARP1Q9Y4F1 1045 aaPredicted RBP16.92■□□□□ 0.3
CHRNA7-221ENST00000636898 SIGLEC16A6NMB1 481 aa16.91■□□□□ 0.3
CHRNA7-221ENST00000636898 ETS1P14921 441 aa16.91■□□□□ 0.3
CHRNA7-221ENST00000636898 TCF7P36402 384 aaPredicted RBP16.91■□□□□ 0.3
CHRNA7-221ENST00000636898 ASPAP45381 313 aa16.91■□□□□ 0.3
CHRNA7-221ENST00000636898 SPARCL1Q14515 664 aa16.91■□□□□ 0.3
CHRNA7-221ENST00000636898 FASTKD3Q14CZ7 662 aaKnown RBP16.91■□□□□ 0.3
CHRNA7-221ENST00000636898 TAZQ16635 292 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms