RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 ASCL5Q7RTU5 278 aa19.29■□□□□ 0.68
PNKP-225ENST00000636214 TMC8Q8IU68 726 aa19.29■□□□□ 0.68
PNKP-225ENST00000636214 MFSD6LQ8IWD5 586 aa19.29■□□□□ 0.68
PNKP-225ENST00000636214 TMEM86AQ8N2M4 240 aa19.29■□□□□ 0.68
PNKP-225ENST00000636214 ZSWIM2Q8NEG5 633 aa19.29■□□□□ 0.68
PNKP-225ENST00000636214 LPIN3Q9BQK8 851 aa19.29■□□□□ 0.68
PNKP-225ENST00000636214 MTMR12Q9C0I1 747 aa19.29■□□□□ 0.68
PNKP-225ENST00000636214 TRPV4Q9HBA0 871 aa19.29■□□□□ 0.68
PNKP-225ENST00000636214 KIAA1586Q9HCI6 787 aa19.29■□□□□ 0.68
PNKP-225ENST00000636214 PDE11AQ9HCR9 933 aa19.29■□□□□ 0.68
PNKP-225ENST00000636214 PCDHB5Q9Y5E4 795 aa19.29■□□□□ 0.68
PNKP-225ENST00000636214 POLR2DO15514 142 aaKnown RBP19.28■□□□□ 0.68
PNKP-225ENST00000636214 GPR158Q5T848 1215 aa19.28■□□□□ 0.68
PNKP-225ENST00000636214 SHC4Q6S5L8 630 aa19.28■□□□□ 0.68
PNKP-225ENST00000636214 CEP57L1Q8IYX8 460 aa19.28■□□□□ 0.68
PNKP-225ENST00000636214 SPRYD3Q8NCJ5 442 aa19.28■□□□□ 0.68
PNKP-225ENST00000636214 SNX9Q9Y5X1 595 aa19.28■□□□□ 0.68
PNKP-225ENST00000636214 MYO15AQ9UKN7 3530 aa19.28■□□□□ 0.68
PNKP-225ENST00000636214 UBE4BO95155 1302 aa19.27■□□□□ 0.68
PNKP-225ENST00000636214 HAPLN1P10915 354 aaPredicted RBP19.27■□□□□ 0.68
PNKP-225ENST00000636214 GLULP15104 373 aa19.27■□□□□ 0.68
PNKP-225ENST00000636214 TARSP26639 723 aaKnown RBP19.27■□□□□ 0.68
PNKP-225ENST00000636214 CDR1P51861 262 aa19.27■□□□□ 0.68
PNKP-225ENST00000636214 WNT7BP56706 349 aa19.27■□□□□ 0.68
PNKP-225ENST00000636214 POTEHQ6S545 545 aa19.27■□□□□ 0.68
PNKP-225ENST00000636214 HS2ST1Q7LGA3 356 aa19.27■□□□□ 0.68
PNKP-225ENST00000636214 PDCL2Q8N4E4 241 aa19.27■□□□□ 0.68
PNKP-225ENST00000636214 GIPC2Q8TF65 315 aa19.27■□□□□ 0.68
PNKP-225ENST00000636214 HPS3Q969F9 1004 aa19.27■□□□□ 0.68
PNKP-225ENST00000636214 LRRC3Q9BY71 257 aa19.27■□□□□ 0.68
PNKP-225ENST00000636214 ZNF334Q9HCZ1 680 aaPredicted RBP19.27■□□□□ 0.68
PNKP-225ENST00000636214 TRPV5Q9NQA5 729 aa19.27■□□□□ 0.68
PNKP-225ENST00000636214 DDX43Q9NXZ2 648 aaKnown RBP19.27■□□□□ 0.68
PNKP-225ENST00000636214 HSPBP1Q9NZL4 362 aa19.27■□□□□ 0.68
PNKP-225ENST00000636214 ZMYM5Q9UJ78 669 aa19.27■□□□□ 0.68
PNKP-225ENST00000636214 NDRG2Q9UN36 371 aaKnown RBP19.27■□□□□ 0.68
PNKP-225ENST00000636214 MTF2Q9Y483 593 aaPredicted RBP19.27■□□□□ 0.68
PNKP-225ENST00000636214 PIAS3Q9Y6X2 628 aa19.27■□□□□ 0.68
PNKP-225ENST00000636214 EP300Q09472 2414 aaPredicted RBP19.27■□□□□ 0.68
PNKP-225ENST00000636214 TICRRQ7Z2Z1 1910 aa19.26■□□□□ 0.67
PNKP-225ENST00000636214 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.26■□□□□ 0.67
PNKP-225ENST00000636214 NRG2O14511 850 aaPredicted RBP19.26■□□□□ 0.67
PNKP-225ENST00000636214 PRPF40AO75400 957 aaKnown RBP19.26■□□□□ 0.67
PNKP-225ENST00000636214 LMNAP02545 664 aaKnown RBP19.26■□□□□ 0.67
PNKP-225ENST00000636214 SP9P0CG40 484 aa19.26■□□□□ 0.67
PNKP-225ENST00000636214 PCSK1P29120 753 aa19.26■□□□□ 0.67
PNKP-225ENST00000636214 RPS9P46781 194 aaKnown RBP19.26■□□□□ 0.67
PNKP-225ENST00000636214 LHX1P48742 406 aa19.26■□□□□ 0.67
PNKP-225ENST00000636214 DUOXA2Q1HG44 320 aa19.26■□□□□ 0.67
PNKP-225ENST00000636214 STXBP5Q5T5C0 1151 aa19.26■□□□□ 0.67
PNKP-225ENST00000636214 LMBRD2Q68DH5 695 aaPredicted RBP19.26■□□□□ 0.67
PNKP-225ENST00000636214 CNNM4Q6P4Q7 775 aa19.26■□□□□ 0.67
PNKP-225ENST00000636214 C1orf228Q6PIY5 440 aa19.26■□□□□ 0.67
PNKP-225ENST00000636214 UNC13DQ70J99 1090 aa19.26■□□□□ 0.67
PNKP-225ENST00000636214 GAREM2Q75VX8 874 aa19.26■□□□□ 0.67
PNKP-225ENST00000636214 ARID3BQ8IVW6 561 aaPredicted RBP19.26■□□□□ 0.67
PNKP-225ENST00000636214 ADGRF2Q8IZF7 708 aa19.26■□□□□ 0.67
PNKP-225ENST00000636214 TOP6BLQ8N6T0 577 aa19.26■□□□□ 0.67
PNKP-225ENST00000636214 SPATA18Q8TC71 538 aa19.26■□□□□ 0.67
PNKP-225ENST00000636214 FAM3CQ92520 227 aa19.26■□□□□ 0.67
PNKP-225ENST00000636214 BORCS6Q96GS4 357 aa19.26■□□□□ 0.67
PNKP-225ENST00000636214 MSANTD3Q96H12 275 aa19.26■□□□□ 0.67
PNKP-225ENST00000636214 FNBP1Q96RU3 617 aa19.26■□□□□ 0.67
PNKP-225ENST00000636214 C7orf25Q9BPX7 421 aa19.26■□□□□ 0.67
PNKP-225ENST00000636214 ACBD6Q9BR61 282 aa19.26■□□□□ 0.67
PNKP-225ENST00000636214 L1RE1Q9UN81 338 aa19.26■□□□□ 0.67
PNKP-225ENST00000636214 R4GN57 208 aa19.26■□□□□ 0.67
PNKP-225ENST00000636214 CFAP54Q96N23 3096 aa19.26■□□□□ 0.67
PNKP-225ENST00000636214 GVINP1Q7Z2Y8 2422 aa19.25■□□□□ 0.67
PNKP-225ENST00000636214 ZNF638Q14966 1978 aaKnown RBP19.25■□□□□ 0.67
PNKP-225ENST00000636214 NUP210Q8TEM1 1887 aaPredicted RBP19.25■□□□□ 0.67
PNKP-225ENST00000636214 CHADO15335 359 aa19.25■□□□□ 0.67
PNKP-225ENST00000636214 ATF6P18850 670 aa19.25■□□□□ 0.67
PNKP-225ENST00000636214 KPNA1P52294 538 aaPredicted RBP19.25■□□□□ 0.67
PNKP-225ENST00000636214 RPL10AP62906 217 aaKnown RBP19.25■□□□□ 0.67
PNKP-225ENST00000636214 LRRTM3Q86VH5 581 aa19.25■□□□□ 0.67
PNKP-225ENST00000636214 CBWD2Q8IUF1 395 aa19.25■□□□□ 0.67
PNKP-225ENST00000636214 NELFCDQ8IXH7 590 aa19.25■□□□□ 0.67
PNKP-225ENST00000636214 ADSSL1Q8N142 457 aa19.25■□□□□ 0.67
PNKP-225ENST00000636214 GLIS3Q8NEA6 775 aa19.25■□□□□ 0.67
PNKP-225ENST00000636214 HINFPQ9BQA5 517 aa19.25■□□□□ 0.67
PNKP-225ENST00000636214 PI4K2AQ9BTU6 479 aa19.25■□□□□ 0.67
PNKP-225ENST00000636214 TASP1Q9H6P5 420 aa19.25■□□□□ 0.67
PNKP-225ENST00000636214 INTS13Q9NVM9 706 aa19.25■□□□□ 0.67
PNKP-225ENST00000636214 GDAP2Q9NXN4 497 aa19.25■□□□□ 0.67
PNKP-225ENST00000636214 OBP2AQ9NY56 170 aa19.25■□□□□ 0.67
PNKP-225ENST00000636214 FBXO4Q9UKT5 387 aa19.25■□□□□ 0.67
PNKP-225ENST00000636214 PCDHA7Q9UN72 937 aa19.25■□□□□ 0.67
PNKP-225ENST00000636214 COL4A3Q01955 1670 aa19.24■□□□□ 0.67
PNKP-225ENST00000636214 KINO60870 393 aaKnown RBP19.24■□□□□ 0.67
PNKP-225ENST00000636214 CSH1P0DML2 217 aa19.24■□□□□ 0.67
PNKP-225ENST00000636214 CSH2P0DML3 217 aa19.24■□□□□ 0.67
PNKP-225ENST00000636214 DLATP10515 647 aaKnown RBP19.24■□□□□ 0.67
PNKP-225ENST00000636214 TNNI1P19237 187 aa19.24■□□□□ 0.67
PNKP-225ENST00000636214 AVPR1AP37288 418 aa19.24■□□□□ 0.67
PNKP-225ENST00000636214 AFMP43652 599 aa19.24■□□□□ 0.67
PNKP-225ENST00000636214 SNRPFP62306 86 aaKnown RBP19.24■□□□□ 0.67
PNKP-225ENST00000636214 CYP4F8P98187 520 aa19.24■□□□□ 0.67
PNKP-225ENST00000636214 CSTF1Q05048 431 aaKnown RBP19.24■□□□□ 0.67
PNKP-225ENST00000636214 PPP2R5DQ14738 602 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms